GO Enrichment Analysis of Co-expressed Genes with
AT4G38520
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035725: sodium ion transmembrane transport | 0.00E+00 |
| 2 | GO:0009946: proximal/distal axis specification | 0.00E+00 |
| 3 | GO:0016048: detection of temperature stimulus | 0.00E+00 |
| 4 | GO:0006216: cytidine catabolic process | 0.00E+00 |
| 5 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 6 | GO:0042026: protein refolding | 1.05E-05 |
| 7 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 5.03E-05 |
| 8 | GO:0006438: valyl-tRNA aminoacylation | 5.03E-05 |
| 9 | GO:0019388: galactose catabolic process | 1.23E-04 |
| 10 | GO:0007005: mitochondrion organization | 1.70E-04 |
| 11 | GO:0010351: lithium ion transport | 2.11E-04 |
| 12 | GO:0052324: plant-type cell wall cellulose biosynthetic process | 2.11E-04 |
| 13 | GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process | 2.11E-04 |
| 14 | GO:0010338: leaf formation | 2.11E-04 |
| 15 | GO:0006342: chromatin silencing | 2.60E-04 |
| 16 | GO:0009590: detection of gravity | 3.09E-04 |
| 17 | GO:0051085: chaperone mediated protein folding requiring cofactor | 3.09E-04 |
| 18 | GO:0010239: chloroplast mRNA processing | 3.09E-04 |
| 19 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 3.09E-04 |
| 20 | GO:0006479: protein methylation | 4.15E-04 |
| 21 | GO:0045088: regulation of innate immune response | 4.15E-04 |
| 22 | GO:0071805: potassium ion transmembrane transport | 4.15E-04 |
| 23 | GO:0098719: sodium ion import across plasma membrane | 5.26E-04 |
| 24 | GO:0010236: plastoquinone biosynthetic process | 5.26E-04 |
| 25 | GO:0016123: xanthophyll biosynthetic process | 5.26E-04 |
| 26 | GO:0009972: cytidine deamination | 6.44E-04 |
| 27 | GO:0006458: 'de novo' protein folding | 7.68E-04 |
| 28 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 7.97E-04 |
| 29 | GO:0006880: intracellular sequestering of iron ion | 8.97E-04 |
| 30 | GO:0006955: immune response | 8.97E-04 |
| 31 | GO:0006826: iron ion transport | 8.97E-04 |
| 32 | GO:0055075: potassium ion homeostasis | 1.03E-03 |
| 33 | GO:0008610: lipid biosynthetic process | 1.03E-03 |
| 34 | GO:0005978: glycogen biosynthetic process | 1.03E-03 |
| 35 | GO:0044030: regulation of DNA methylation | 1.17E-03 |
| 36 | GO:0048193: Golgi vesicle transport | 1.17E-03 |
| 37 | GO:0090333: regulation of stomatal closure | 1.32E-03 |
| 38 | GO:0008356: asymmetric cell division | 1.47E-03 |
| 39 | GO:0051453: regulation of intracellular pH | 1.47E-03 |
| 40 | GO:0006879: cellular iron ion homeostasis | 1.79E-03 |
| 41 | GO:0048229: gametophyte development | 1.79E-03 |
| 42 | GO:0019684: photosynthesis, light reaction | 1.79E-03 |
| 43 | GO:0006006: glucose metabolic process | 2.14E-03 |
| 44 | GO:0009767: photosynthetic electron transport chain | 2.14E-03 |
| 45 | GO:0009908: flower development | 2.23E-03 |
| 46 | GO:0009735: response to cytokinin | 2.26E-03 |
| 47 | GO:0010020: chloroplast fission | 2.32E-03 |
| 48 | GO:0019253: reductive pentose-phosphate cycle | 2.32E-03 |
| 49 | GO:0010039: response to iron ion | 2.50E-03 |
| 50 | GO:0006633: fatty acid biosynthetic process | 2.80E-03 |
| 51 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.88E-03 |
| 52 | GO:0006418: tRNA aminoacylation for protein translation | 3.08E-03 |
| 53 | GO:0016998: cell wall macromolecule catabolic process | 3.29E-03 |
| 54 | GO:0061077: chaperone-mediated protein folding | 3.29E-03 |
| 55 | GO:0006730: one-carbon metabolic process | 3.50E-03 |
| 56 | GO:0009411: response to UV | 3.71E-03 |
| 57 | GO:0010082: regulation of root meristem growth | 3.71E-03 |
| 58 | GO:0016117: carotenoid biosynthetic process | 4.15E-03 |
| 59 | GO:0042391: regulation of membrane potential | 4.37E-03 |
| 60 | GO:0006814: sodium ion transport | 4.83E-03 |
| 61 | GO:0019252: starch biosynthetic process | 5.07E-03 |
| 62 | GO:0055072: iron ion homeostasis | 5.07E-03 |
| 63 | GO:0010183: pollen tube guidance | 5.07E-03 |
| 64 | GO:0000302: response to reactive oxygen species | 5.32E-03 |
| 65 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 5.32E-03 |
| 66 | GO:0048366: leaf development | 5.56E-03 |
| 67 | GO:0042742: defense response to bacterium | 6.18E-03 |
| 68 | GO:0006904: vesicle docking involved in exocytosis | 6.33E-03 |
| 69 | GO:0009615: response to virus | 6.85E-03 |
| 70 | GO:0045892: negative regulation of transcription, DNA-templated | 7.11E-03 |
| 71 | GO:0009627: systemic acquired resistance | 7.40E-03 |
| 72 | GO:0008219: cell death | 8.24E-03 |
| 73 | GO:0006887: exocytosis | 1.10E-02 |
| 74 | GO:0009744: response to sucrose | 1.16E-02 |
| 75 | GO:0009965: leaf morphogenesis | 1.26E-02 |
| 76 | GO:0009846: pollen germination | 1.37E-02 |
| 77 | GO:0006813: potassium ion transport | 1.44E-02 |
| 78 | GO:0009626: plant-type hypersensitive response | 1.69E-02 |
| 79 | GO:0009793: embryo development ending in seed dormancy | 1.79E-02 |
| 80 | GO:0006457: protein folding | 1.99E-02 |
| 81 | GO:0009790: embryo development | 2.41E-02 |
| 82 | GO:0007623: circadian rhythm | 2.72E-02 |
| 83 | GO:0009451: RNA modification | 2.76E-02 |
| 84 | GO:0009739: response to gibberellin | 2.95E-02 |
| 85 | GO:0008380: RNA splicing | 3.08E-02 |
| 86 | GO:0010468: regulation of gene expression | 3.08E-02 |
| 87 | GO:0009860: pollen tube growth | 3.91E-02 |
| 88 | GO:0006970: response to osmotic stress | 3.91E-02 |
| 89 | GO:0009409: response to cold | 4.21E-02 |
| 90 | GO:0006810: transport | 4.56E-02 |
| 91 | GO:0015979: photosynthesis | 4.75E-02 |
| 92 | GO:0046686: response to cadmium ion | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047844: deoxycytidine deaminase activity | 0.00E+00 |
| 2 | GO:0008962: phosphatidylglycerophosphatase activity | 0.00E+00 |
| 3 | GO:0004832: valine-tRNA ligase activity | 5.03E-05 |
| 4 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 5.03E-05 |
| 5 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 5.03E-05 |
| 6 | GO:0042834: peptidoglycan binding | 5.03E-05 |
| 7 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 5.03E-05 |
| 8 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 5.03E-05 |
| 9 | GO:0046982: protein heterodimerization activity | 5.09E-05 |
| 10 | GO:0044183: protein binding involved in protein folding | 5.51E-05 |
| 11 | GO:0010291: carotene beta-ring hydroxylase activity | 1.23E-04 |
| 12 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.23E-04 |
| 13 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 1.23E-04 |
| 14 | GO:0004312: fatty acid synthase activity | 1.23E-04 |
| 15 | GO:0004614: phosphoglucomutase activity | 1.23E-04 |
| 16 | GO:0004751: ribose-5-phosphate isomerase activity | 2.11E-04 |
| 17 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 2.11E-04 |
| 18 | GO:0008199: ferric iron binding | 3.09E-04 |
| 19 | GO:0004322: ferroxidase activity | 3.09E-04 |
| 20 | GO:0008276: protein methyltransferase activity | 3.09E-04 |
| 21 | GO:0015081: sodium ion transmembrane transporter activity | 6.44E-04 |
| 22 | GO:0080030: methyl indole-3-acetate esterase activity | 6.44E-04 |
| 23 | GO:0004784: superoxide dismutase activity | 6.44E-04 |
| 24 | GO:0005516: calmodulin binding | 7.49E-04 |
| 25 | GO:0004126: cytidine deaminase activity | 7.68E-04 |
| 26 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 7.68E-04 |
| 27 | GO:0005261: cation channel activity | 7.68E-04 |
| 28 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 1.03E-03 |
| 29 | GO:0030234: enzyme regulator activity | 1.63E-03 |
| 30 | GO:0015386: potassium:proton antiporter activity | 1.79E-03 |
| 31 | GO:0051082: unfolded protein binding | 1.80E-03 |
| 32 | GO:0008081: phosphoric diester hydrolase activity | 2.14E-03 |
| 33 | GO:0030552: cAMP binding | 2.50E-03 |
| 34 | GO:0030553: cGMP binding | 2.50E-03 |
| 35 | GO:0005528: FK506 binding | 2.88E-03 |
| 36 | GO:0005216: ion channel activity | 3.08E-03 |
| 37 | GO:0015079: potassium ion transmembrane transporter activity | 3.08E-03 |
| 38 | GO:0008324: cation transmembrane transporter activity | 3.08E-03 |
| 39 | GO:0004812: aminoacyl-tRNA ligase activity | 4.15E-03 |
| 40 | GO:0005249: voltage-gated potassium channel activity | 4.37E-03 |
| 41 | GO:0030551: cyclic nucleotide binding | 4.37E-03 |
| 42 | GO:0015385: sodium:proton antiporter activity | 5.81E-03 |
| 43 | GO:0016597: amino acid binding | 6.59E-03 |
| 44 | GO:0005515: protein binding | 7.00E-03 |
| 45 | GO:0042803: protein homodimerization activity | 7.34E-03 |
| 46 | GO:0005198: structural molecule activity | 1.26E-02 |
| 47 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.30E-02 |
| 48 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.65E-02 |
| 49 | GO:0022857: transmembrane transporter activity | 1.77E-02 |
| 50 | GO:0003779: actin binding | 1.80E-02 |
| 51 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.20E-02 |
| 52 | GO:0016757: transferase activity, transferring glycosyl groups | 2.90E-02 |
| 53 | GO:0005506: iron ion binding | 3.07E-02 |
| 54 | GO:0042802: identical protein binding | 3.23E-02 |
| 55 | GO:0003824: catalytic activity | 3.42E-02 |
| 56 | GO:0000287: magnesium ion binding | 3.66E-02 |
| 57 | GO:0016788: hydrolase activity, acting on ester bonds | 3.76E-02 |
| 58 | GO:0005524: ATP binding | 4.05E-02 |
| 59 | GO:0004672: protein kinase activity | 4.56E-02 |
| 60 | GO:0004674: protein serine/threonine kinase activity | 4.58E-02 |
| 61 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009570: chloroplast stroma | 1.53E-07 |
| 2 | GO:0009507: chloroplast | 2.38E-07 |
| 3 | GO:0000786: nucleosome | 9.12E-07 |
| 4 | GO:0009941: chloroplast envelope | 3.61E-06 |
| 5 | GO:0010319: stromule | 1.52E-05 |
| 6 | GO:0009344: nitrite reductase complex [NAD(P)H] | 5.03E-05 |
| 7 | GO:0010330: cellulose synthase complex | 2.11E-04 |
| 8 | GO:0000790: nuclear chromatin | 2.22E-04 |
| 9 | GO:0000793: condensed chromosome | 6.44E-04 |
| 10 | GO:0042644: chloroplast nucleoid | 1.32E-03 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 2.24E-03 |
| 12 | GO:0005886: plasma membrane | 2.31E-03 |
| 13 | GO:0030095: chloroplast photosystem II | 2.32E-03 |
| 14 | GO:0005730: nucleolus | 2.58E-03 |
| 15 | GO:0009654: photosystem II oxygen evolving complex | 3.08E-03 |
| 16 | GO:0019898: extrinsic component of membrane | 5.07E-03 |
| 17 | GO:0000145: exocyst | 5.56E-03 |
| 18 | GO:0009295: nucleoid | 6.33E-03 |
| 19 | GO:0000325: plant-type vacuole | 9.12E-03 |
| 20 | GO:0090406: pollen tube | 1.16E-02 |
| 21 | GO:0005856: cytoskeleton | 1.26E-02 |
| 22 | GO:0022626: cytosolic ribosome | 1.47E-02 |
| 23 | GO:0009535: chloroplast thylakoid membrane | 1.72E-02 |
| 24 | GO:0009579: thylakoid | 1.84E-02 |
| 25 | GO:0009534: chloroplast thylakoid | 1.86E-02 |
| 26 | GO:0031225: anchored component of membrane | 2.40E-02 |
| 27 | GO:0046658: anchored component of plasma membrane | 3.32E-02 |
| 28 | GO:0005618: cell wall | 3.51E-02 |
| 29 | GO:0000139: Golgi membrane | 4.21E-02 |
| 30 | GO:0031969: chloroplast membrane | 4.32E-02 |