Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G38400

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010081: regulation of inflorescence meristem growth0.00E+00
2GO:1901485: positive regulation of transcription factor catabolic process0.00E+00
3GO:0010411: xyloglucan metabolic process2.53E-06
4GO:0010080: regulation of floral meristem growth8.96E-05
5GO:0009962: regulation of flavonoid biosynthetic process8.96E-05
6GO:2000029: regulation of proanthocyanidin biosynthetic process8.96E-05
7GO:0009718: anthocyanin-containing compound biosynthetic process1.73E-04
8GO:0042546: cell wall biogenesis1.96E-04
9GO:0031542: positive regulation of anthocyanin biosynthetic process2.12E-04
10GO:0071497: cellular response to freezing2.12E-04
11GO:0005992: trehalose biosynthetic process2.77E-04
12GO:0010581: regulation of starch biosynthetic process3.54E-04
13GO:0010022: meristem determinacy3.54E-04
14GO:1902358: sulfate transmembrane transport5.10E-04
15GO:0000271: polysaccharide biosynthetic process5.13E-04
16GO:0009741: response to brassinosteroid5.51E-04
17GO:0040008: regulation of growth8.28E-04
18GO:0016131: brassinosteroid metabolic process8.59E-04
19GO:2000762: regulation of phenylpropanoid metabolic process8.59E-04
20GO:0030154: cell differentiation9.55E-04
21GO:0060918: auxin transport1.05E-03
22GO:1900425: negative regulation of defense response to bacterium1.05E-03
23GO:0009813: flavonoid biosynthetic process1.30E-03
24GO:0009826: unidimensional cell growth1.43E-03
25GO:0051510: regulation of unidimensional cell growth1.46E-03
26GO:0070413: trehalose metabolism in response to stress1.69E-03
27GO:0051865: protein autoubiquitination2.18E-03
28GO:0000902: cell morphogenesis2.18E-03
29GO:0043069: negative regulation of programmed cell death2.70E-03
30GO:0000038: very long-chain fatty acid metabolic process2.98E-03
31GO:2000652: regulation of secondary cell wall biogenesis2.98E-03
32GO:0010582: floral meristem determinacy3.26E-03
33GO:0071555: cell wall organization3.73E-03
34GO:0034605: cellular response to heat3.86E-03
35GO:0009742: brassinosteroid mediated signaling pathway4.02E-03
36GO:0009969: xyloglucan biosynthetic process4.18E-03
37GO:0006357: regulation of transcription from RNA polymerase II promoter4.60E-03
38GO:0010026: trichome differentiation5.17E-03
39GO:0016998: cell wall macromolecule catabolic process5.52E-03
40GO:0009411: response to UV6.23E-03
41GO:0040007: growth6.23E-03
42GO:0009831: plant-type cell wall modification involved in multidimensional cell growth6.23E-03
43GO:0009306: protein secretion6.61E-03
44GO:0010214: seed coat development6.61E-03
45GO:0000226: microtubule cytoskeleton organization7.37E-03
46GO:0045489: pectin biosynthetic process7.77E-03
47GO:0010305: leaf vascular tissue pattern formation7.77E-03
48GO:0009791: post-embryonic development8.58E-03
49GO:0010583: response to cyclopentenone9.42E-03
50GO:0007264: small GTPase mediated signal transduction9.42E-03
51GO:0009828: plant-type cell wall loosening1.03E-02
52GO:0006904: vesicle docking involved in exocytosis1.07E-02
53GO:0001666: response to hypoxia1.17E-02
54GO:0009723: response to ethylene1.17E-02
55GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.21E-02
56GO:0010200: response to chitin1.30E-02
57GO:0044550: secondary metabolite biosynthetic process1.36E-02
58GO:0048767: root hair elongation1.46E-02
59GO:0045454: cell redox homeostasis1.50E-02
60GO:0048527: lateral root development1.56E-02
61GO:0010119: regulation of stomatal movement1.56E-02
62GO:0009867: jasmonic acid mediated signaling pathway1.66E-02
63GO:0016051: carbohydrate biosynthetic process1.66E-02
64GO:0009637: response to blue light1.66E-02
65GO:0009751: response to salicylic acid1.83E-02
66GO:0006629: lipid metabolic process1.86E-02
67GO:0009873: ethylene-activated signaling pathway2.40E-02
68GO:0006486: protein glycosylation2.46E-02
69GO:0051603: proteolysis involved in cellular protein catabolic process2.52E-02
70GO:0055114: oxidation-reduction process2.54E-02
71GO:0048316: seed development2.84E-02
72GO:0009738: abscisic acid-activated signaling pathway3.19E-02
73GO:0009416: response to light stimulus3.29E-02
74GO:0042744: hydrogen peroxide catabolic process4.07E-02
75GO:0006633: fatty acid biosynthetic process4.36E-02
RankGO TermAdjusted P value
1GO:0090411: brassinosteroid binding0.00E+00
2GO:0047890: flavanone 4-reductase activity0.00E+00
3GO:0016711: flavonoid 3'-monooxygenase activity0.00E+00
4GO:0045552: dihydrokaempferol 4-reductase activity0.00E+00
5GO:0016762: xyloglucan:xyloglucosyl transferase activity3.42E-05
6GO:0016798: hydrolase activity, acting on glycosyl bonds7.85E-05
7GO:0080132: fatty acid alpha-hydroxylase activity8.96E-05
8GO:0004805: trehalose-phosphatase activity1.10E-04
9GO:0004864: protein phosphatase inhibitor activity1.10E-04
10GO:0050736: O-malonyltransferase activity2.12E-04
11GO:0033843: xyloglucan 6-xylosyltransferase activity5.10E-04
12GO:0004872: receptor activity6.33E-04
13GO:0002020: protease binding8.59E-04
14GO:0035252: UDP-xylosyltransferase activity1.05E-03
15GO:0010427: abscisic acid binding1.05E-03
16GO:0008271: secondary active sulfate transmembrane transporter activity1.93E-03
17GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.47E-03
18GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.83E-03
19GO:0000976: transcription regulatory region sequence-specific DNA binding3.26E-03
20GO:0015116: sulfate transmembrane transporter activity3.26E-03
21GO:0005506: iron ion binding3.64E-03
22GO:0044212: transcription regulatory region DNA binding3.73E-03
23GO:0016758: transferase activity, transferring hexosyl groups4.61E-03
24GO:0008134: transcription factor binding4.83E-03
25GO:0046983: protein dimerization activity5.79E-03
26GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity5.87E-03
27GO:0016757: transferase activity, transferring glycosyl groups6.98E-03
28GO:0020037: heme binding7.45E-03
29GO:0050662: coenzyme binding8.17E-03
30GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds9.48E-03
31GO:0016759: cellulose synthase activity1.03E-02
32GO:0016791: phosphatase activity1.03E-02
33GO:0019825: oxygen binding1.04E-02
34GO:0004806: triglyceride lipase activity1.31E-02
35GO:0003924: GTPase activity1.86E-02
36GO:0004185: serine-type carboxypeptidase activity1.99E-02
37GO:0003700: transcription factor activity, sequence-specific DNA binding2.02E-02
38GO:0015293: symporter activity2.16E-02
39GO:0004842: ubiquitin-protein transferase activity2.45E-02
40GO:0016298: lipase activity2.52E-02
41GO:0003677: DNA binding2.99E-02
42GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.78E-02
43GO:0016740: transferase activity4.01E-02
44GO:0043565: sequence-specific DNA binding4.28E-02
45GO:0005516: calmodulin binding4.93E-02
RankGO TermAdjusted P value
1GO:0042406: extrinsic component of endoplasmic reticulum membrane3.54E-04
2GO:0005615: extracellular space1.01E-03
3GO:0009505: plant-type cell wall1.21E-03
4GO:0048046: apoplast2.24E-03
5GO:0031225: anchored component of membrane2.51E-03
6GO:0005794: Golgi apparatus2.79E-03
7GO:0000139: Golgi membrane5.91E-03
8GO:0046658: anchored component of plasma membrane8.64E-03
9GO:0005618: cell wall9.10E-03
10GO:0005887: integral component of plasma membrane2.52E-02
Gene type



Gene DE type