GO Enrichment Analysis of Co-expressed Genes with
AT4G36540
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
2 | GO:0042493: response to drug | 0.00E+00 |
3 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
4 | GO:0033494: ferulate metabolic process | 0.00E+00 |
5 | GO:0045176: apical protein localization | 0.00E+00 |
6 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
7 | GO:0006412: translation | 1.56E-13 |
8 | GO:0032544: plastid translation | 3.01E-12 |
9 | GO:0042254: ribosome biogenesis | 3.19E-08 |
10 | GO:0015979: photosynthesis | 1.35E-07 |
11 | GO:0015976: carbon utilization | 2.85E-07 |
12 | GO:0009735: response to cytokinin | 2.50E-05 |
13 | GO:0010037: response to carbon dioxide | 4.54E-05 |
14 | GO:2000122: negative regulation of stomatal complex development | 4.54E-05 |
15 | GO:0000413: protein peptidyl-prolyl isomerization | 1.96E-04 |
16 | GO:0042335: cuticle development | 1.96E-04 |
17 | GO:0006810: transport | 2.00E-04 |
18 | GO:0043489: RNA stabilization | 2.57E-04 |
19 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.57E-04 |
20 | GO:0000481: maturation of 5S rRNA | 2.57E-04 |
21 | GO:1904964: positive regulation of phytol biosynthetic process | 2.57E-04 |
22 | GO:0042371: vitamin K biosynthetic process | 2.57E-04 |
23 | GO:0034337: RNA folding | 2.57E-04 |
24 | GO:0071588: hydrogen peroxide mediated signaling pathway | 2.57E-04 |
25 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 2.57E-04 |
26 | GO:0060627: regulation of vesicle-mediated transport | 2.57E-04 |
27 | GO:0001736: establishment of planar polarity | 5.68E-04 |
28 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 5.68E-04 |
29 | GO:0009773: photosynthetic electron transport in photosystem I | 5.76E-04 |
30 | GO:0009409: response to cold | 5.81E-04 |
31 | GO:0009725: response to hormone | 7.47E-04 |
32 | GO:0009416: response to light stimulus | 8.31E-04 |
33 | GO:0010143: cutin biosynthetic process | 8.40E-04 |
34 | GO:0015840: urea transport | 9.22E-04 |
35 | GO:0006518: peptide metabolic process | 9.22E-04 |
36 | GO:0006869: lipid transport | 9.59E-04 |
37 | GO:0042742: defense response to bacterium | 9.80E-04 |
38 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.04E-03 |
39 | GO:0006833: water transport | 1.04E-03 |
40 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 1.32E-03 |
41 | GO:0051639: actin filament network formation | 1.32E-03 |
42 | GO:0080170: hydrogen peroxide transmembrane transport | 1.32E-03 |
43 | GO:0051016: barbed-end actin filament capping | 1.32E-03 |
44 | GO:0009650: UV protection | 1.32E-03 |
45 | GO:0051764: actin crosslink formation | 1.76E-03 |
46 | GO:0030104: water homeostasis | 1.76E-03 |
47 | GO:0034220: ion transmembrane transport | 2.10E-03 |
48 | GO:0006461: protein complex assembly | 2.25E-03 |
49 | GO:0048827: phyllome development | 2.77E-03 |
50 | GO:0042549: photosystem II stabilization | 2.77E-03 |
51 | GO:0009913: epidermal cell differentiation | 2.77E-03 |
52 | GO:0009612: response to mechanical stimulus | 3.33E-03 |
53 | GO:0006694: steroid biosynthetic process | 3.33E-03 |
54 | GO:0010019: chloroplast-nucleus signaling pathway | 3.33E-03 |
55 | GO:0010555: response to mannitol | 3.33E-03 |
56 | GO:0009955: adaxial/abaxial pattern specification | 3.33E-03 |
57 | GO:0042372: phylloquinone biosynthetic process | 3.33E-03 |
58 | GO:1901259: chloroplast rRNA processing | 3.33E-03 |
59 | GO:0045454: cell redox homeostasis | 3.69E-03 |
60 | GO:0009645: response to low light intensity stimulus | 3.93E-03 |
61 | GO:0051693: actin filament capping | 3.93E-03 |
62 | GO:0010196: nonphotochemical quenching | 3.93E-03 |
63 | GO:0032508: DNA duplex unwinding | 4.56E-03 |
64 | GO:0008610: lipid biosynthetic process | 4.56E-03 |
65 | GO:0009642: response to light intensity | 4.56E-03 |
66 | GO:0030091: protein repair | 4.56E-03 |
67 | GO:0046620: regulation of organ growth | 4.56E-03 |
68 | GO:0010411: xyloglucan metabolic process | 4.74E-03 |
69 | GO:0016042: lipid catabolic process | 4.85E-03 |
70 | GO:0009808: lignin metabolic process | 5.22E-03 |
71 | GO:0009932: cell tip growth | 5.22E-03 |
72 | GO:0009657: plastid organization | 5.22E-03 |
73 | GO:0018298: protein-chromophore linkage | 5.25E-03 |
74 | GO:0009817: defense response to fungus, incompatible interaction | 5.25E-03 |
75 | GO:0045490: pectin catabolic process | 5.59E-03 |
76 | GO:0000902: cell morphogenesis | 5.92E-03 |
77 | GO:0009631: cold acclimation | 6.07E-03 |
78 | GO:0010119: regulation of stomatal movement | 6.07E-03 |
79 | GO:0010205: photoinhibition | 6.64E-03 |
80 | GO:0034599: cellular response to oxidative stress | 6.96E-03 |
81 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 7.40E-03 |
82 | GO:0048829: root cap development | 7.40E-03 |
83 | GO:0006949: syncytium formation | 7.40E-03 |
84 | GO:0043085: positive regulation of catalytic activity | 8.19E-03 |
85 | GO:0048765: root hair cell differentiation | 8.19E-03 |
86 | GO:0000038: very long-chain fatty acid metabolic process | 8.19E-03 |
87 | GO:0019684: photosynthesis, light reaction | 8.19E-03 |
88 | GO:0009089: lysine biosynthetic process via diaminopimelate | 8.19E-03 |
89 | GO:0009926: auxin polar transport | 8.59E-03 |
90 | GO:0042546: cell wall biogenesis | 8.93E-03 |
91 | GO:0016024: CDP-diacylglycerol biosynthetic process | 9.00E-03 |
92 | GO:0009826: unidimensional cell growth | 9.28E-03 |
93 | GO:0009658: chloroplast organization | 9.74E-03 |
94 | GO:0006006: glucose metabolic process | 9.85E-03 |
95 | GO:0010229: inflorescence development | 9.85E-03 |
96 | GO:0030036: actin cytoskeleton organization | 9.85E-03 |
97 | GO:0007015: actin filament organization | 1.07E-02 |
98 | GO:0010540: basipetal auxin transport | 1.07E-02 |
99 | GO:0010207: photosystem II assembly | 1.07E-02 |
100 | GO:0019253: reductive pentose-phosphate cycle | 1.07E-02 |
101 | GO:0019762: glucosinolate catabolic process | 1.25E-02 |
102 | GO:0051017: actin filament bundle assembly | 1.35E-02 |
103 | GO:0019344: cysteine biosynthetic process | 1.35E-02 |
104 | GO:0000027: ribosomal large subunit assembly | 1.35E-02 |
105 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.45E-02 |
106 | GO:0003333: amino acid transmembrane transport | 1.55E-02 |
107 | GO:0061077: chaperone-mediated protein folding | 1.55E-02 |
108 | GO:0031408: oxylipin biosynthetic process | 1.55E-02 |
109 | GO:0009793: embryo development ending in seed dormancy | 1.71E-02 |
110 | GO:0009411: response to UV | 1.76E-02 |
111 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.76E-02 |
112 | GO:0006284: base-excision repair | 1.86E-02 |
113 | GO:0019722: calcium-mediated signaling | 1.86E-02 |
114 | GO:0006662: glycerol ether metabolic process | 2.20E-02 |
115 | GO:0009958: positive gravitropism | 2.20E-02 |
116 | GO:0009790: embryo development | 2.42E-02 |
117 | GO:0048825: cotyledon development | 2.43E-02 |
118 | GO:0000302: response to reactive oxygen species | 2.56E-02 |
119 | GO:0016132: brassinosteroid biosynthetic process | 2.56E-02 |
120 | GO:0071554: cell wall organization or biogenesis | 2.56E-02 |
121 | GO:0002229: defense response to oomycetes | 2.56E-02 |
122 | GO:0006633: fatty acid biosynthetic process | 2.61E-02 |
123 | GO:0009630: gravitropism | 2.68E-02 |
124 | GO:0010583: response to cyclopentenone | 2.68E-02 |
125 | GO:1901657: glycosyl compound metabolic process | 2.80E-02 |
126 | GO:0009828: plant-type cell wall loosening | 2.93E-02 |
127 | GO:0007267: cell-cell signaling | 3.06E-02 |
128 | GO:0071805: potassium ion transmembrane transport | 3.06E-02 |
129 | GO:0010027: thylakoid membrane organization | 3.32E-02 |
130 | GO:0009911: positive regulation of flower development | 3.32E-02 |
131 | GO:0071555: cell wall organization | 3.45E-02 |
132 | GO:0006979: response to oxidative stress | 3.49E-02 |
133 | GO:0042128: nitrate assimilation | 3.59E-02 |
134 | GO:0016311: dephosphorylation | 3.87E-02 |
135 | GO:0009733: response to auxin | 4.08E-02 |
136 | GO:0000160: phosphorelay signal transduction system | 4.16E-02 |
137 | GO:0010311: lateral root formation | 4.16E-02 |
138 | GO:0010218: response to far red light | 4.30E-02 |
139 | GO:0009834: plant-type secondary cell wall biogenesis | 4.30E-02 |
140 | GO:0009407: toxin catabolic process | 4.30E-02 |
141 | GO:0006865: amino acid transport | 4.60E-02 |
142 | GO:0009637: response to blue light | 4.75E-02 |
143 | GO:0045087: innate immune response | 4.75E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
2 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
3 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
4 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
5 | GO:0019843: rRNA binding | 5.00E-19 |
6 | GO:0003735: structural constituent of ribosome | 9.86E-16 |
7 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.70E-05 |
8 | GO:0004089: carbonate dehydratase activity | 3.88E-05 |
9 | GO:0030570: pectate lyase activity | 1.39E-04 |
10 | GO:0015200: methylammonium transmembrane transporter activity | 2.57E-04 |
11 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 2.98E-04 |
12 | GO:0016788: hydrolase activity, acting on ester bonds | 4.18E-04 |
13 | GO:0015250: water channel activity | 4.74E-04 |
14 | GO:0008289: lipid binding | 5.10E-04 |
15 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 5.68E-04 |
16 | GO:0042389: omega-3 fatty acid desaturase activity | 5.68E-04 |
17 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 5.68E-04 |
18 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 5.68E-04 |
19 | GO:0052689: carboxylic ester hydrolase activity | 7.10E-04 |
20 | GO:0008266: poly(U) RNA binding | 8.40E-04 |
21 | GO:0030267: glyoxylate reductase (NADP) activity | 9.22E-04 |
22 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 9.22E-04 |
23 | GO:0050734: hydroxycinnamoyltransferase activity | 9.22E-04 |
24 | GO:0005528: FK506 binding | 1.15E-03 |
25 | GO:0043023: ribosomal large subunit binding | 1.32E-03 |
26 | GO:0008097: 5S rRNA binding | 1.32E-03 |
27 | GO:0001872: (1->3)-beta-D-glucan binding | 1.32E-03 |
28 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.43E-03 |
29 | GO:0015204: urea transmembrane transporter activity | 1.76E-03 |
30 | GO:0010011: auxin binding | 1.76E-03 |
31 | GO:0010328: auxin influx transmembrane transporter activity | 1.76E-03 |
32 | GO:0043495: protein anchor | 1.76E-03 |
33 | GO:0008725: DNA-3-methyladenine glycosylase activity | 2.25E-03 |
34 | GO:0016208: AMP binding | 2.77E-03 |
35 | GO:0016688: L-ascorbate peroxidase activity | 2.77E-03 |
36 | GO:0008200: ion channel inhibitor activity | 2.77E-03 |
37 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.77E-03 |
38 | GO:0008519: ammonium transmembrane transporter activity | 2.77E-03 |
39 | GO:0004130: cytochrome-c peroxidase activity | 2.77E-03 |
40 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.77E-03 |
41 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.79E-03 |
42 | GO:0005509: calcium ion binding | 2.85E-03 |
43 | GO:0051015: actin filament binding | 3.18E-03 |
44 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 3.33E-03 |
45 | GO:0051920: peroxiredoxin activity | 3.33E-03 |
46 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 3.33E-03 |
47 | GO:0051753: mannan synthase activity | 3.33E-03 |
48 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 3.33E-03 |
49 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.59E-03 |
50 | GO:0019899: enzyme binding | 3.93E-03 |
51 | GO:0004871: signal transducer activity | 3.96E-03 |
52 | GO:0016829: lyase activity | 4.10E-03 |
53 | GO:0016168: chlorophyll binding | 4.26E-03 |
54 | GO:0016209: antioxidant activity | 4.56E-03 |
55 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 4.74E-03 |
56 | GO:0102483: scopolin beta-glucosidase activity | 4.74E-03 |
57 | GO:0003993: acid phosphatase activity | 6.96E-03 |
58 | GO:0008422: beta-glucosidase activity | 7.27E-03 |
59 | GO:0008047: enzyme activator activity | 7.40E-03 |
60 | GO:0008794: arsenate reductase (glutaredoxin) activity | 8.19E-03 |
61 | GO:0051537: 2 iron, 2 sulfur cluster binding | 9.29E-03 |
62 | GO:0015293: symporter activity | 9.66E-03 |
63 | GO:0031072: heat shock protein binding | 9.85E-03 |
64 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.25E-02 |
65 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.25E-02 |
66 | GO:0031409: pigment binding | 1.25E-02 |
67 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.25E-02 |
68 | GO:0015079: potassium ion transmembrane transporter activity | 1.45E-02 |
69 | GO:0043424: protein histidine kinase binding | 1.45E-02 |
70 | GO:0015035: protein disulfide oxidoreductase activity | 1.70E-02 |
71 | GO:0016746: transferase activity, transferring acyl groups | 1.70E-02 |
72 | GO:0022891: substrate-specific transmembrane transporter activity | 1.76E-02 |
73 | GO:0047134: protein-disulfide reductase activity | 1.97E-02 |
74 | GO:0030276: clathrin binding | 2.20E-02 |
75 | GO:0004791: thioredoxin-disulfide reductase activity | 2.32E-02 |
76 | GO:0004872: receptor activity | 2.43E-02 |
77 | GO:0000156: phosphorelay response regulator activity | 2.80E-02 |
78 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.80E-02 |
79 | GO:0016791: phosphatase activity | 2.93E-02 |
80 | GO:0016413: O-acetyltransferase activity | 3.19E-02 |
81 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 3.59E-02 |
82 | GO:0042802: identical protein binding | 3.64E-02 |
83 | GO:0004683: calmodulin-dependent protein kinase activity | 3.73E-02 |
84 | GO:0030247: polysaccharide binding | 3.73E-02 |
85 | GO:0005215: transporter activity | 3.99E-02 |
86 | GO:0004222: metalloendopeptidase activity | 4.30E-02 |
87 | GO:0030145: manganese ion binding | 4.45E-02 |
88 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 4.45E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0044391: ribosomal subunit | 0.00E+00 |
2 | GO:0009507: chloroplast | 6.13E-30 |
3 | GO:0009570: chloroplast stroma | 5.58E-27 |
4 | GO:0009941: chloroplast envelope | 7.20E-26 |
5 | GO:0009579: thylakoid | 1.44E-22 |
6 | GO:0009535: chloroplast thylakoid membrane | 9.56E-20 |
7 | GO:0005840: ribosome | 4.13E-16 |
8 | GO:0009543: chloroplast thylakoid lumen | 3.40E-14 |
9 | GO:0031977: thylakoid lumen | 2.26E-13 |
10 | GO:0048046: apoplast | 1.49E-08 |
11 | GO:0009654: photosystem II oxygen evolving complex | 5.90E-08 |
12 | GO:0009534: chloroplast thylakoid | 1.06E-07 |
13 | GO:0019898: extrinsic component of membrane | 4.85E-07 |
14 | GO:0016020: membrane | 7.40E-06 |
15 | GO:0031225: anchored component of membrane | 2.37E-05 |
16 | GO:0005618: cell wall | 2.82E-05 |
17 | GO:0046658: anchored component of plasma membrane | 4.09E-05 |
18 | GO:0030095: chloroplast photosystem II | 4.73E-05 |
19 | GO:0009505: plant-type cell wall | 1.23E-04 |
20 | GO:0042807: central vacuole | 1.90E-04 |
21 | GO:0005576: extracellular region | 2.09E-04 |
22 | GO:0009547: plastid ribosome | 2.57E-04 |
23 | GO:0043674: columella | 2.57E-04 |
24 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.60E-04 |
25 | GO:0042170: plastid membrane | 5.68E-04 |
26 | GO:0008290: F-actin capping protein complex | 5.68E-04 |
27 | GO:0005884: actin filament | 5.76E-04 |
28 | GO:0000311: plastid large ribosomal subunit | 6.59E-04 |
29 | GO:0032432: actin filament bundle | 1.32E-03 |
30 | GO:0009523: photosystem II | 2.61E-03 |
31 | GO:0031969: chloroplast membrane | 2.80E-03 |
32 | GO:0010319: stromule | 3.59E-03 |
33 | GO:0009986: cell surface | 3.93E-03 |
34 | GO:0009533: chloroplast stromal thylakoid | 3.93E-03 |
35 | GO:0000326: protein storage vacuole | 5.22E-03 |
36 | GO:0005763: mitochondrial small ribosomal subunit | 5.92E-03 |
37 | GO:0008180: COP9 signalosome | 5.92E-03 |
38 | GO:0015934: large ribosomal subunit | 6.07E-03 |
39 | GO:0005886: plasma membrane | 8.72E-03 |
40 | GO:0032040: small-subunit processome | 9.00E-03 |
41 | GO:0031012: extracellular matrix | 9.85E-03 |
42 | GO:0000312: plastid small ribosomal subunit | 1.07E-02 |
43 | GO:0022626: cytosolic ribosome | 1.13E-02 |
44 | GO:0030076: light-harvesting complex | 1.16E-02 |
45 | GO:0005875: microtubule associated complex | 1.25E-02 |
46 | GO:0042651: thylakoid membrane | 1.45E-02 |
47 | GO:0015935: small ribosomal subunit | 1.55E-02 |
48 | GO:0009536: plastid | 1.57E-02 |
49 | GO:0030136: clathrin-coated vesicle | 1.97E-02 |
50 | GO:0005770: late endosome | 2.20E-02 |
51 | GO:0009522: photosystem I | 2.32E-02 |
52 | GO:0009506: plasmodesma | 2.61E-02 |
53 | GO:0009705: plant-type vacuole membrane | 2.87E-02 |
54 | GO:0005778: peroxisomal membrane | 3.06E-02 |
55 | GO:0009295: nucleoid | 3.06E-02 |
56 | GO:0005887: integral component of plasma membrane | 3.08E-02 |
57 | GO:0030529: intracellular ribonucleoprotein complex | 3.32E-02 |
58 | GO:0019005: SCF ubiquitin ligase complex | 4.01E-02 |