co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G36040

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070979: protein K11-linked ubiquitination	0.00E+00
2	GO:0009877: nodulation	0.00E+00
3	GO:1904962: plastid to vacuole vesicle-mediated transport	0.00E+00
4	GO:0071211: protein targeting to vacuole involved in autophagy	0.00E+00
5	GO:0030644: cellular chloride ion homeostasis	0.00E+00
6	GO:0009723: response to ethylene	3.34E-06
7	GO:0010600: regulation of auxin biosynthetic process	1.06E-05
8	GO:0007623: circadian rhythm	1.20E-05
9	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	3.74E-05
10	GO:0010928: regulation of auxin mediated signaling pathway	6.58E-05
11	GO:0006475: internal protein amino acid acetylation	1.10E-04
12	GO:0006474: N-terminal protein amino acid acetylation	1.10E-04
13	GO:0017198: N-terminal peptidyl-serine acetylation	1.10E-04
14	GO:0010362: negative regulation of anion channel activity by blue light	1.10E-04
15	GO:0080173: male-female gamete recognition during double fertilization	1.10E-04
16	GO:0018002: N-terminal peptidyl-glutamic acid acetylation	1.10E-04
17	GO:0009739: response to gibberellin	1.90E-04
18	GO:0009718: anthocyanin-containing compound biosynthetic process	2.30E-04
19	GO:0010155: regulation of proton transport	2.57E-04
20	GO:0006883: cellular sodium ion homeostasis	2.57E-04
21	GO:1902884: positive regulation of response to oxidative stress	2.57E-04
22	GO:0050793: regulation of developmental process	2.57E-04
23	GO:0000256: allantoin catabolic process	2.57E-04
24	GO:0009644: response to high light intensity	3.00E-04
25	GO:0045165: cell fate commitment	4.25E-04
26	GO:1902448: positive regulation of shade avoidance	4.25E-04
27	GO:0010136: ureide catabolic process	4.25E-04
28	GO:0031145: anaphase-promoting complex-dependent catabolic process	4.25E-04
29	GO:1901562: response to paraquat	4.25E-04
30	GO:0010017: red or far-red light signaling pathway	4.85E-04
31	GO:0030071: regulation of mitotic metaphase/anaphase transition	6.10E-04
32	GO:0006145: purine nucleobase catabolic process	6.10E-04
33	GO:0010023: proanthocyanidin biosynthetic process	8.10E-04
34	GO:0009765: photosynthesis, light harvesting	8.10E-04
35	GO:1901002: positive regulation of response to salt stress	8.10E-04
36	GO:0015846: polyamine transport	8.10E-04
37	GO:0006355: regulation of transcription, DNA-templated	8.27E-04
38	GO:0006351: transcription, DNA-templated	9.06E-04
39	GO:0009904: chloroplast accumulation movement	1.02E-03
40	GO:0016123: xanthophyll biosynthetic process	1.02E-03
41	GO:0009957: epidermal cell fate specification	1.02E-03
42	GO:0032876: negative regulation of DNA endoreduplication	1.02E-03
43	GO:0002238: response to molecule of fungal origin	1.25E-03
44	GO:0000060: protein import into nucleus, translocation	1.25E-03
45	GO:0009903: chloroplast avoidance movement	1.49E-03
46	GO:0010077: maintenance of inflorescence meristem identity	1.49E-03
47	GO:0018298: protein-chromophore linkage	1.61E-03
48	GO:0000160: phosphorelay signal transduction system	1.69E-03
49	GO:0010044: response to aluminum ion	1.75E-03
50	GO:0032880: regulation of protein localization	1.75E-03
51	GO:0010161: red light signaling pathway	1.75E-03
52	GO:0009645: response to low light intensity stimulus	1.75E-03
53	GO:0009416: response to light stimulus	1.95E-03
54	GO:0009704: de-etiolation	2.03E-03
55	GO:0032875: regulation of DNA endoreduplication	2.03E-03
56	GO:0009637: response to blue light	2.04E-03
57	GO:0010099: regulation of photomorphogenesis	2.32E-03
58	GO:0009827: plant-type cell wall modification	2.32E-03
59	GO:0010114: response to red light	2.61E-03
60	GO:0009638: phototropism	2.93E-03
61	GO:0030042: actin filament depolymerization	2.93E-03
62	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.93E-03
63	GO:0044550: secondary metabolite biosynthetic process	3.10E-03
64	GO:0009688: abscisic acid biosynthetic process	3.25E-03
65	GO:0009641: shade avoidance	3.25E-03
66	GO:0006535: cysteine biosynthetic process from serine	3.25E-03
67	GO:0009585: red, far-red light phototransduction	3.51E-03
68	GO:0050826: response to freezing	4.30E-03
69	GO:0018107: peptidyl-threonine phosphorylation	4.30E-03
70	GO:0009785: blue light signaling pathway	4.30E-03
71	GO:0009408: response to heat	4.57E-03
72	GO:0007015: actin filament organization	4.66E-03
73	GO:0009266: response to temperature stimulus	4.66E-03
74	GO:0090351: seedling development	5.04E-03
75	GO:0019853: L-ascorbic acid biosynthetic process	5.04E-03
76	GO:0019344: cysteine biosynthetic process	5.84E-03
77	GO:0010026: trichome differentiation	6.25E-03
78	GO:0009768: photosynthesis, light harvesting in photosystem I	6.25E-03
79	GO:0003333: amino acid transmembrane transport	6.67E-03
80	GO:0051260: protein homooligomerization	6.67E-03
81	GO:0048511: rhythmic process	6.67E-03
82	GO:0010431: seed maturation	6.67E-03
83	GO:0006012: galactose metabolic process	7.55E-03
84	GO:0009693: ethylene biosynthetic process	7.55E-03
85	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	8.46E-03
86	GO:0010087: phloem or xylem histogenesis	8.93E-03
87	GO:0010182: sugar mediated signaling pathway	9.41E-03
88	GO:0006814: sodium ion transport	9.91E-03
89	GO:0035556: intracellular signal transduction	1.01E-02
90	GO:0009651: response to salt stress	1.11E-02
91	GO:0009567: double fertilization forming a zygote and endosperm	1.25E-02
92	GO:0010286: heat acclimation	1.30E-02
93	GO:0009911: positive regulation of flower development	1.42E-02
94	GO:0006970: response to osmotic stress	1.44E-02
95	GO:0010029: regulation of seed germination	1.47E-02
96	GO:0048573: photoperiodism, flowering	1.59E-02
97	GO:0015995: chlorophyll biosynthetic process	1.59E-02
98	GO:0080167: response to karrikin	1.66E-02
99	GO:0046777: protein autophosphorylation	1.77E-02
100	GO:0010218: response to far red light	1.83E-02
101	GO:0010119: regulation of stomatal movement	1.89E-02
102	GO:0006865: amino acid transport	1.96E-02
103	GO:0009414: response to water deprivation	2.25E-02
104	GO:0009751: response to salicylic acid	2.41E-02
105	GO:0051707: response to other organism	2.42E-02
106	GO:0009640: photomorphogenesis	2.42E-02
107	GO:0008283: cell proliferation	2.42E-02
108	GO:0006629: lipid metabolic process	2.45E-02
109	GO:0009753: response to jasmonic acid	2.63E-02
110	GO:0000165: MAPK cascade	2.77E-02
111	GO:0042538: hyperosmotic salinity response	2.85E-02
112	GO:0006813: potassium ion transport	2.99E-02
113	GO:0006857: oligopeptide transport	3.14E-02
114	GO:0009909: regulation of flower development	3.22E-02
115	GO:0009409: response to cold	3.37E-02
116	GO:0009553: embryo sac development	3.77E-02
117	GO:0009624: response to nematode	3.85E-02
118	GO:0018105: peptidyl-serine phosphorylation	3.93E-02
119	GO:0046686: response to cadmium ion	4.01E-02

Rank	GO Term	Adjusted P value
1	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
2	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
3	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
4	GO:1990189: peptide-serine-N-acetyltransferase activity	1.10E-04
5	GO:1990190: peptide-glutamate-N-acetyltransferase activity	1.10E-04
6	GO:0050017: L-3-cyanoalanine synthase activity	2.57E-04
7	GO:0080045: quercetin 3'-O-glucosyltransferase activity	2.57E-04
8	GO:0004848: ureidoglycolate hydrolase activity	4.25E-04
9	GO:0031625: ubiquitin protein ligase binding	4.56E-04
10	GO:0009882: blue light photoreceptor activity	6.10E-04
11	GO:0015203: polyamine transmembrane transporter activity	6.10E-04
12	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.02E-03
13	GO:0080046: quercetin 4'-O-glucosyltransferase activity	1.25E-03
14	GO:0004124: cysteine synthase activity	1.49E-03
15	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.90E-03
16	GO:0004033: aldo-keto reductase (NADP) activity	2.03E-03
17	GO:0071949: FAD binding	2.62E-03
18	GO:0000989: transcription factor activity, transcription factor binding	2.62E-03
19	GO:0015293: symporter activity	2.93E-03
20	GO:0015174: basic amino acid transmembrane transporter activity	2.93E-03
21	GO:0003677: DNA binding	3.23E-03
22	GO:0047372: acylglycerol lipase activity	3.59E-03
23	GO:0005315: inorganic phosphate transmembrane transporter activity	4.30E-03
24	GO:0000155: phosphorelay sensor kinase activity	4.30E-03
25	GO:0004565: beta-galactosidase activity	4.30E-03
26	GO:0004022: alcohol dehydrogenase (NAD) activity	4.30E-03
27	GO:0003712: transcription cofactor activity	5.04E-03
28	GO:0031409: pigment binding	5.44E-03
29	GO:0008134: transcription factor binding	5.84E-03
30	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	6.40E-03
31	GO:0004674: protein serine/threonine kinase activity	7.06E-03
32	GO:0008514: organic anion transmembrane transporter activity	8.00E-03
33	GO:0005249: voltage-gated potassium channel activity	8.93E-03
34	GO:0004842: ubiquitin-protein transferase activity	9.29E-03
35	GO:0008080: N-acetyltransferase activity	9.41E-03
36	GO:0010181: FMN binding	9.91E-03
37	GO:0004672: protein kinase activity	1.02E-02
38	GO:0000156: phosphorelay response regulator activity	1.20E-02
39	GO:0008237: metallopeptidase activity	1.30E-02
40	GO:0016168: chlorophyll binding	1.47E-02
41	GO:0004497: monooxygenase activity	1.66E-02
42	GO:0005515: protein binding	2.01E-02
43	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.14E-02
44	GO:0008270: zinc ion binding	3.12E-02
45	GO:0015171: amino acid transmembrane transporter activity	3.22E-02
46	GO:0046983: protein dimerization activity	3.32E-02
47	GO:0045735: nutrient reservoir activity	3.37E-02
48	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.61E-02
49	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.61E-02
50	GO:0016874: ligase activity	3.69E-02
51	GO:0003779: actin binding	3.77E-02
52	GO:0016746: transferase activity, transferring acyl groups	3.93E-02
53	GO:0030170: pyridoxal phosphate binding	4.86E-02
54	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0009898: cytoplasmic side of plasma membrane	1.06E-05
2	GO:0031415: NatA complex	2.57E-04
3	GO:0008076: voltage-gated potassium channel complex	6.10E-04
4	GO:0000151: ubiquitin ligase complex	1.61E-03
5	GO:0009986: cell surface	1.75E-03
6	GO:0005680: anaphase-promoting complex	2.62E-03
7	GO:0031969: chloroplast membrane	2.79E-03
8	GO:0016604: nuclear body	2.93E-03
9	GO:0030076: light-harvesting complex	5.04E-03
10	GO:0010287: plastoglobule	5.90E-03
11	GO:0015629: actin cytoskeleton	7.55E-03
12	GO:0009522: photosystem I	9.91E-03
13	GO:0009523: photosystem II	1.04E-02
14	GO:0005634: nucleus	1.06E-02
15	GO:0009535: chloroplast thylakoid membrane	1.92E-02
16	GO:0009941: chloroplast envelope	1.97E-02
17	GO:0005773: vacuole	2.42E-02
18	GO:0043231: intracellular membrane-bounded organelle	2.70E-02
19	GO:0005681: spliceosomal complex	3.37E-02
20	GO:0016607: nuclear speck	3.45E-02
21	GO:0010008: endosome membrane	3.45E-02
22	GO:0005783: endoplasmic reticulum	3.82E-02
23	GO:0009706: chloroplast inner membrane	3.85E-02
24	GO:0016020: membrane	3.89E-02
25	GO:0005623: cell	4.60E-02