GO Enrichment Analysis of Co-expressed Genes with
AT4G35850
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019918: peptidyl-arginine methylation, to symmetrical-dimethyl arginine | 0.00E+00 |
| 2 | GO:0071433: cell wall repair | 0.00E+00 |
| 3 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 4 | GO:0000470: maturation of LSU-rRNA | 9.37E-09 |
| 5 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 8.18E-08 |
| 6 | GO:0000460: maturation of 5.8S rRNA | 1.51E-06 |
| 7 | GO:0055081: anion homeostasis | 3.50E-05 |
| 8 | GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 3.50E-05 |
| 9 | GO:0000494: box C/D snoRNA 3'-end processing | 3.50E-05 |
| 10 | GO:1990258: histone glutamine methylation | 3.50E-05 |
| 11 | GO:0010220: positive regulation of vernalization response | 8.78E-05 |
| 12 | GO:0071494: cellular response to UV-C | 1.52E-04 |
| 13 | GO:0070475: rRNA base methylation | 1.52E-04 |
| 14 | GO:0008652: cellular amino acid biosynthetic process | 1.52E-04 |
| 15 | GO:0046686: response to cadmium ion | 1.87E-04 |
| 16 | GO:0007276: gamete generation | 2.25E-04 |
| 17 | GO:1900864: mitochondrial RNA modification | 3.05E-04 |
| 18 | GO:0046345: abscisic acid catabolic process | 3.05E-04 |
| 19 | GO:0018279: protein N-linked glycosylation via asparagine | 3.89E-04 |
| 20 | GO:0045116: protein neddylation | 3.89E-04 |
| 21 | GO:0031167: rRNA methylation | 3.89E-04 |
| 22 | GO:0009088: threonine biosynthetic process | 5.70E-04 |
| 23 | GO:0006364: rRNA processing | 8.23E-04 |
| 24 | GO:0001510: RNA methylation | 8.71E-04 |
| 25 | GO:0016569: covalent chromatin modification | 1.08E-03 |
| 26 | GO:1900865: chloroplast RNA modification | 1.09E-03 |
| 27 | GO:0043069: negative regulation of programmed cell death | 1.20E-03 |
| 28 | GO:0010162: seed dormancy process | 1.20E-03 |
| 29 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.32E-03 |
| 30 | GO:0010582: floral meristem determinacy | 1.44E-03 |
| 31 | GO:0006541: glutamine metabolic process | 1.70E-03 |
| 32 | GO:0070588: calcium ion transmembrane transport | 1.84E-03 |
| 33 | GO:0000162: tryptophan biosynthetic process | 1.97E-03 |
| 34 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.12E-03 |
| 35 | GO:0000027: ribosomal large subunit assembly | 2.12E-03 |
| 36 | GO:0051302: regulation of cell division | 2.26E-03 |
| 37 | GO:0006334: nucleosome assembly | 2.41E-03 |
| 38 | GO:0007131: reciprocal meiotic recombination | 2.56E-03 |
| 39 | GO:0009294: DNA mediated transformation | 2.71E-03 |
| 40 | GO:0008033: tRNA processing | 3.20E-03 |
| 41 | GO:0006635: fatty acid beta-oxidation | 3.88E-03 |
| 42 | GO:0031047: gene silencing by RNA | 4.06E-03 |
| 43 | GO:0045454: cell redox homeostasis | 4.42E-03 |
| 44 | GO:0010252: auxin homeostasis | 4.42E-03 |
| 45 | GO:0032259: methylation | 5.21E-03 |
| 46 | GO:0006974: cellular response to DNA damage stimulus | 5.38E-03 |
| 47 | GO:0006281: DNA repair | 5.43E-03 |
| 48 | GO:0009407: toxin catabolic process | 6.40E-03 |
| 49 | GO:0010043: response to zinc ion | 6.61E-03 |
| 50 | GO:0006099: tricarboxylic acid cycle | 7.27E-03 |
| 51 | GO:0000154: rRNA modification | 9.12E-03 |
| 52 | GO:0009636: response to toxic substance | 9.12E-03 |
| 53 | GO:0009965: leaf morphogenesis | 9.12E-03 |
| 54 | GO:0009664: plant-type cell wall organization | 9.86E-03 |
| 55 | GO:0009909: regulation of flower development | 1.11E-02 |
| 56 | GO:0009414: response to water deprivation | 1.91E-02 |
| 57 | GO:0042742: defense response to bacterium | 1.96E-02 |
| 58 | GO:0009617: response to bacterium | 2.22E-02 |
| 59 | GO:0009826: unidimensional cell growth | 2.60E-02 |
| 60 | GO:0042254: ribosome biogenesis | 2.71E-02 |
| 61 | GO:0006351: transcription, DNA-templated | 3.83E-02 |
| 62 | GO:0048364: root development | 4.24E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004164: diphthine synthase activity | 0.00E+00 |
| 2 | GO:0050220: prostaglandin-E synthase activity | 0.00E+00 |
| 3 | GO:0043021: ribonucleoprotein complex binding | 8.18E-08 |
| 4 | GO:0030515: snoRNA binding | 8.12E-06 |
| 5 | GO:0000166: nucleotide binding | 1.51E-05 |
| 6 | GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity | 3.50E-05 |
| 7 | GO:1990259: histone-glutamine methyltransferase activity | 3.50E-05 |
| 8 | GO:0042134: rRNA primary transcript binding | 3.50E-05 |
| 9 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 8.78E-05 |
| 10 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 8.78E-05 |
| 11 | GO:0019781: NEDD8 activating enzyme activity | 8.78E-05 |
| 12 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 8.78E-05 |
| 13 | GO:0008649: rRNA methyltransferase activity | 1.52E-04 |
| 14 | GO:0004049: anthranilate synthase activity | 1.52E-04 |
| 15 | GO:0008469: histone-arginine N-methyltransferase activity | 1.52E-04 |
| 16 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.52E-04 |
| 17 | GO:0004072: aspartate kinase activity | 2.25E-04 |
| 18 | GO:0008276: protein methyltransferase activity | 2.25E-04 |
| 19 | GO:0005507: copper ion binding | 3.33E-04 |
| 20 | GO:0008641: small protein activating enzyme activity | 3.89E-04 |
| 21 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 3.89E-04 |
| 22 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 4.78E-04 |
| 23 | GO:0004017: adenylate kinase activity | 5.70E-04 |
| 24 | GO:0043295: glutathione binding | 6.66E-04 |
| 25 | GO:0005524: ATP binding | 6.86E-04 |
| 26 | GO:0003678: DNA helicase activity | 9.78E-04 |
| 27 | GO:0008026: ATP-dependent helicase activity | 1.21E-03 |
| 28 | GO:0001054: RNA polymerase I activity | 1.32E-03 |
| 29 | GO:0005388: calcium-transporting ATPase activity | 1.57E-03 |
| 30 | GO:0004407: histone deacetylase activity | 2.12E-03 |
| 31 | GO:0005528: FK506 binding | 2.12E-03 |
| 32 | GO:0008168: methyltransferase activity | 2.88E-03 |
| 33 | GO:0016597: amino acid binding | 4.80E-03 |
| 34 | GO:0050897: cobalt ion binding | 6.61E-03 |
| 35 | GO:0042393: histone binding | 7.72E-03 |
| 36 | GO:0004364: glutathione transferase activity | 8.18E-03 |
| 37 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.36E-03 |
| 38 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.04E-02 |
| 39 | GO:0015035: protein disulfide oxidoreductase activity | 1.36E-02 |
| 40 | GO:0004386: helicase activity | 1.41E-02 |
| 41 | GO:0050660: flavin adenine dinucleotide binding | 2.96E-02 |
| 42 | GO:0009055: electron carrier activity | 4.32E-02 |
| 43 | GO:0003723: RNA binding | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034455: t-UTP complex | 0.00E+00 |
| 2 | GO:0005730: nucleolus | 2.68E-16 |
| 3 | GO:0030687: preribosome, large subunit precursor | 2.76E-08 |
| 4 | GO:0070545: PeBoW complex | 8.18E-08 |
| 5 | GO:0031428: box C/D snoRNP complex | 4.00E-06 |
| 6 | GO:0032040: small-subunit processome | 3.77E-05 |
| 7 | GO:0008250: oligosaccharyltransferase complex | 3.89E-04 |
| 8 | GO:0005829: cytosol | 7.29E-04 |
| 9 | GO:0005736: DNA-directed RNA polymerase I complex | 9.78E-04 |
| 10 | GO:0005834: heterotrimeric G-protein complex | 1.02E-03 |
| 11 | GO:0015030: Cajal body | 1.09E-03 |
| 12 | GO:0005759: mitochondrial matrix | 1.78E-03 |
| 13 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.27E-03 |
| 14 | GO:0016592: mediator complex | 4.06E-03 |
| 15 | GO:0005773: vacuole | 7.13E-03 |
| 16 | GO:0005634: nucleus | 7.48E-03 |
| 17 | GO:0005747: mitochondrial respiratory chain complex I | 1.19E-02 |
| 18 | GO:0005654: nucleoplasm | 1.53E-02 |
| 19 | GO:0005774: vacuolar membrane | 1.65E-02 |
| 20 | GO:0009705: plant-type vacuole membrane | 1.96E-02 |
| 21 | GO:0005618: cell wall | 1.96E-02 |
| 22 | GO:0046658: anchored component of plasma membrane | 2.39E-02 |
| 23 | GO:0022625: cytosolic large ribosomal subunit | 3.23E-02 |
| 24 | GO:0005739: mitochondrion | 4.59E-02 |