Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G35500

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006793: phosphorus metabolic process0.00E+00
2GO:0051238: sequestering of metal ion0.00E+00
3GO:0072722: response to amitrole0.00E+00
4GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
5GO:0010055: atrichoblast differentiation0.00E+00
6GO:0010421: hydrogen peroxide-mediated programmed cell death0.00E+00
7GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
8GO:0046865: terpenoid transport0.00E+00
9GO:0042430: indole-containing compound metabolic process0.00E+00
10GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
11GO:0071456: cellular response to hypoxia3.48E-06
12GO:0010193: response to ozone1.34E-05
13GO:0006032: chitin catabolic process1.54E-05
14GO:0009617: response to bacterium2.15E-05
15GO:0042742: defense response to bacterium3.63E-05
16GO:0006468: protein phosphorylation7.95E-05
17GO:0010200: response to chitin8.03E-05
18GO:0032107: regulation of response to nutrient levels2.34E-04
19GO:0015760: glucose-6-phosphate transport2.34E-04
20GO:0033306: phytol metabolic process2.34E-04
21GO:0009737: response to abscisic acid3.86E-04
22GO:0009627: systemic acquired resistance4.57E-04
23GO:0000272: polysaccharide catabolic process5.04E-04
24GO:1902000: homogentisate catabolic process5.20E-04
25GO:0051592: response to calcium ion5.20E-04
26GO:0031648: protein destabilization5.20E-04
27GO:0009805: coumarin biosynthetic process5.20E-04
28GO:0090057: root radial pattern formation5.20E-04
29GO:0009866: induced systemic resistance, ethylene mediated signaling pathway5.20E-04
30GO:0009915: phloem sucrose loading5.20E-04
31GO:0044419: interspecies interaction between organisms5.20E-04
32GO:0031349: positive regulation of defense response5.20E-04
33GO:0015712: hexose phosphate transport5.20E-04
34GO:0009407: toxin catabolic process6.31E-04
35GO:0002237: response to molecule of bacterial origin7.36E-04
36GO:1900140: regulation of seedling development8.44E-04
37GO:0035436: triose phosphate transmembrane transport8.44E-04
38GO:0010351: lithium ion transport8.44E-04
39GO:0010476: gibberellin mediated signaling pathway8.44E-04
40GO:0010325: raffinose family oligosaccharide biosynthetic process8.44E-04
41GO:0010272: response to silver ion8.44E-04
42GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway8.44E-04
43GO:0015692: lead ion transport8.44E-04
44GO:0009072: aromatic amino acid family metabolic process8.44E-04
45GO:0015714: phosphoenolpyruvate transport8.44E-04
46GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway8.44E-04
47GO:0080168: abscisic acid transport8.44E-04
48GO:0009751: response to salicylic acid8.99E-04
49GO:0042542: response to hydrogen peroxide9.79E-04
50GO:0006874: cellular calcium ion homeostasis1.11E-03
51GO:0006882: cellular zinc ion homeostasis1.20E-03
52GO:0001676: long-chain fatty acid metabolic process1.20E-03
53GO:0046836: glycolipid transport1.20E-03
54GO:0045017: glycerolipid biosynthetic process1.20E-03
55GO:0070301: cellular response to hydrogen peroxide1.20E-03
56GO:0016998: cell wall macromolecule catabolic process1.21E-03
57GO:0006855: drug transmembrane transport1.25E-03
58GO:0031347: regulation of defense response1.31E-03
59GO:0031348: negative regulation of defense response1.33E-03
60GO:0010109: regulation of photosynthesis1.61E-03
61GO:0060548: negative regulation of cell death1.61E-03
62GO:0009939: positive regulation of gibberellic acid mediated signaling pathway1.61E-03
63GO:0006536: glutamate metabolic process1.61E-03
64GO:1901002: positive regulation of response to salt stress1.61E-03
65GO:0015713: phosphoglycerate transport1.61E-03
66GO:0009626: plant-type hypersensitive response2.00E-03
67GO:0010225: response to UV-C2.05E-03
68GO:0034052: positive regulation of plant-type hypersensitive response2.05E-03
69GO:0009697: salicylic acid biosynthetic process2.05E-03
70GO:0045487: gibberellin catabolic process2.05E-03
71GO:0009749: response to glucose2.27E-03
72GO:0009624: response to nematode2.33E-03
73GO:0002229: defense response to oomycetes2.43E-03
74GO:0009643: photosynthetic acclimation2.52E-03
75GO:0050665: hydrogen peroxide biosynthetic process2.52E-03
76GO:0015691: cadmium ion transport2.52E-03
77GO:0060918: auxin transport2.52E-03
78GO:0010189: vitamin E biosynthetic process3.03E-03
79GO:0009854: oxidative photosynthetic carbon pathway3.03E-03
80GO:0048444: floral organ morphogenesis3.03E-03
81GO:0010555: response to mannitol3.03E-03
82GO:2000067: regulation of root morphogenesis3.03E-03
83GO:0071470: cellular response to osmotic stress3.03E-03
84GO:0009615: response to virus3.51E-03
85GO:0050829: defense response to Gram-negative bacterium3.58E-03
86GO:0030026: cellular manganese ion homeostasis3.58E-03
87GO:0000122: negative regulation of transcription from RNA polymerase II promoter3.58E-03
88GO:0010928: regulation of auxin mediated signaling pathway4.15E-03
89GO:0009787: regulation of abscisic acid-activated signaling pathway4.15E-03
90GO:0040008: regulation of growth4.41E-03
91GO:0010204: defense response signaling pathway, resistance gene-independent4.74E-03
92GO:0009699: phenylpropanoid biosynthetic process4.74E-03
93GO:0007186: G-protein coupled receptor signaling pathway4.74E-03
94GO:0010262: somatic embryogenesis4.74E-03
95GO:0010112: regulation of systemic acquired resistance5.37E-03
96GO:0009056: catabolic process5.37E-03
97GO:0046685: response to arsenic-containing substance5.37E-03
98GO:0019432: triglyceride biosynthetic process5.37E-03
99GO:0009688: abscisic acid biosynthetic process6.71E-03
100GO:0010162: seed dormancy process6.71E-03
101GO:0055062: phosphate ion homeostasis6.71E-03
102GO:0007064: mitotic sister chromatid cohesion6.71E-03
103GO:0009750: response to fructose7.43E-03
104GO:0006816: calcium ion transport7.43E-03
105GO:0009807: lignan biosynthetic process7.43E-03
106GO:0009744: response to sucrose7.46E-03
107GO:0050832: defense response to fungus7.69E-03
108GO:0006890: retrograde vesicle-mediated transport, Golgi to ER8.17E-03
109GO:0006790: sulfur compound metabolic process8.17E-03
110GO:0012501: programmed cell death8.17E-03
111GO:0006820: anion transport8.17E-03
112GO:0002213: defense response to insect8.17E-03
113GO:0015706: nitrate transport8.17E-03
114GO:0009636: response to toxic substance8.39E-03
115GO:0006979: response to oxidative stress8.76E-03
116GO:2000028: regulation of photoperiodism, flowering8.93E-03
117GO:0006812: cation transport9.38E-03
118GO:0009266: response to temperature stimulus9.72E-03
119GO:0034605: cellular response to heat9.72E-03
120GO:0070588: calcium ion transmembrane transport1.05E-02
121GO:0046854: phosphatidylinositol phosphorylation1.05E-02
122GO:0042343: indole glucosinolate metabolic process1.05E-02
123GO:0010167: response to nitrate1.05E-02
124GO:0080167: response to karrikin1.07E-02
125GO:0006636: unsaturated fatty acid biosynthetic process1.14E-02
126GO:0006952: defense response1.17E-02
127GO:0009620: response to fungus1.31E-02
128GO:0098542: defense response to other organism1.40E-02
129GO:0010431: seed maturation1.40E-02
130GO:0055085: transmembrane transport1.40E-02
131GO:0019748: secondary metabolic process1.50E-02
132GO:0006012: galactose metabolic process1.59E-02
133GO:0009686: gibberellin biosynthetic process1.59E-02
134GO:0006817: phosphate ion transport1.69E-02
135GO:0009753: response to jasmonic acid1.92E-02
136GO:0010154: fruit development1.99E-02
137GO:0009958: positive gravitropism1.99E-02
138GO:0006885: regulation of pH1.99E-02
139GO:0048544: recognition of pollen2.10E-02
140GO:0006814: sodium ion transport2.10E-02
141GO:0055114: oxidation-reduction process2.18E-02
142GO:0006623: protein targeting to vacuole2.20E-02
143GO:0010183: pollen tube guidance2.20E-02
144GO:0000302: response to reactive oxygen species2.31E-02
145GO:0010150: leaf senescence2.49E-02
146GO:0009651: response to salt stress2.64E-02
147GO:0010252: auxin homeostasis2.65E-02
148GO:0009639: response to red or far red light2.65E-02
149GO:0009414: response to water deprivation2.72E-02
150GO:0006904: vesicle docking involved in exocytosis2.77E-02
151GO:0051607: defense response to virus2.89E-02
152GO:0009816: defense response to bacterium, incompatible interaction3.13E-02
153GO:0042128: nitrate assimilation3.25E-02
154GO:0016311: dephosphorylation3.50E-02
155GO:0016049: cell growth3.50E-02
156GO:0008219: cell death3.63E-02
157GO:0009817: defense response to fungus, incompatible interaction3.63E-02
158GO:0006499: N-terminal protein myristoylation3.89E-02
159GO:0006811: ion transport3.89E-02
160GO:0010043: response to zinc ion4.03E-02
161GO:0007568: aging4.03E-02
162GO:0048527: lateral root development4.03E-02
163GO:0009860: pollen tube growth4.14E-02
164GO:0045087: innate immune response4.30E-02
165GO:0009409: response to cold4.36E-02
166GO:0006099: tricarboxylic acid cycle4.43E-02
167GO:0009723: response to ethylene4.44E-02
168GO:0006887: exocytosis4.85E-02
169GO:0006631: fatty acid metabolic process4.85E-02
RankGO TermAdjusted P value
1GO:0010176: homogentisate phytyltransferase activity0.00E+00
2GO:0035885: exochitinase activity0.00E+00
3GO:0016034: maleylacetoacetate isomerase activity0.00E+00
4GO:0008843: endochitinase activity0.00E+00
5GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
6GO:0005524: ATP binding2.87E-05
7GO:0008061: chitin binding4.59E-05
8GO:0004144: diacylglycerol O-acyltransferase activity1.24E-04
9GO:0004674: protein serine/threonine kinase activity1.47E-04
10GO:0004568: chitinase activity4.36E-04
11GO:0004338: glucan exo-1,3-beta-glucosidase activity5.20E-04
12GO:0010331: gibberellin binding5.20E-04
13GO:0045543: gibberellin 2-beta-dioxygenase activity5.20E-04
14GO:0015152: glucose-6-phosphate transmembrane transporter activity5.20E-04
15GO:0005315: inorganic phosphate transmembrane transporter activity6.54E-04
16GO:0005388: calcium-transporting ATPase activity6.54E-04
17GO:0071917: triose-phosphate transmembrane transporter activity8.44E-04
18GO:0001664: G-protein coupled receptor binding8.44E-04
19GO:0031683: G-protein beta/gamma-subunit complex binding8.44E-04
20GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity8.44E-04
21GO:0004364: glutathione transferase activity9.79E-04
22GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity1.20E-03
23GO:0004351: glutamate decarboxylase activity1.20E-03
24GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity1.20E-03
25GO:0017089: glycolipid transporter activity1.20E-03
26GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity1.20E-03
27GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity1.20E-03
28GO:0004108: citrate (Si)-synthase activity1.20E-03
29GO:0010279: indole-3-acetic acid amido synthetase activity1.61E-03
30GO:0009916: alternative oxidase activity1.61E-03
31GO:0008891: glycolate oxidase activity1.61E-03
32GO:0015120: phosphoglycerate transmembrane transporter activity1.61E-03
33GO:0004659: prenyltransferase activity1.61E-03
34GO:0015368: calcium:cation antiporter activity1.61E-03
35GO:0051861: glycolipid binding1.61E-03
36GO:0015369: calcium:proton antiporter activity1.61E-03
37GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity2.05E-03
38GO:0008200: ion channel inhibitor activity2.52E-03
39GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.03E-03
40GO:0102391: decanoate--CoA ligase activity3.03E-03
41GO:0003978: UDP-glucose 4-epimerase activity3.03E-03
42GO:0016301: kinase activity3.37E-03
43GO:0004467: long-chain fatty acid-CoA ligase activity3.58E-03
44GO:0015491: cation:cation antiporter activity4.15E-03
45GO:0004714: transmembrane receptor protein tyrosine kinase activity4.15E-03
46GO:0015288: porin activity4.15E-03
47GO:0015297: antiporter activity4.41E-03
48GO:0008308: voltage-gated anion channel activity4.74E-03
49GO:0015238: drug transmembrane transporter activity4.80E-03
50GO:0005516: calmodulin binding5.15E-03
51GO:0016614: oxidoreductase activity, acting on CH-OH group of donors5.28E-03
52GO:0004672: protein kinase activity5.39E-03
53GO:0015112: nitrate transmembrane transporter activity6.03E-03
54GO:0042626: ATPase activity, coupled to transmembrane movement of substances6.34E-03
55GO:0008559: xenobiotic-transporting ATPase activity7.43E-03
56GO:0016887: ATPase activity7.97E-03
57GO:0004022: alcohol dehydrogenase (NAD) activity8.93E-03
58GO:0005262: calcium channel activity8.93E-03
59GO:0015114: phosphate ion transmembrane transporter activity8.93E-03
60GO:0043565: sequence-specific DNA binding9.70E-03
61GO:0042973: glucan endo-1,3-beta-D-glucosidase activity9.72E-03
62GO:0050660: flavin adenine dinucleotide binding9.82E-03
63GO:0004970: ionotropic glutamate receptor activity1.05E-02
64GO:0004867: serine-type endopeptidase inhibitor activity1.05E-02
65GO:0005217: intracellular ligand-gated ion channel activity1.05E-02
66GO:0001046: core promoter sequence-specific DNA binding1.22E-02
67GO:0033612: receptor serine/threonine kinase binding1.40E-02
68GO:0004298: threonine-type endopeptidase activity1.40E-02
69GO:0030246: carbohydrate binding1.53E-02
70GO:0022891: substrate-specific transmembrane transporter activity1.59E-02
71GO:0008810: cellulase activity1.59E-02
72GO:0004499: N,N-dimethylaniline monooxygenase activity1.69E-02
73GO:0005451: monovalent cation:proton antiporter activity1.89E-02
74GO:0015299: solute:proton antiporter activity2.10E-02
75GO:0010181: FMN binding2.10E-02
76GO:0004197: cysteine-type endopeptidase activity2.42E-02
77GO:0015385: sodium:proton antiporter activity2.54E-02
78GO:0044212: transcription regulatory region DNA binding2.81E-02
79GO:0051213: dioxygenase activity3.01E-02
80GO:0004683: calmodulin-dependent protein kinase activity3.38E-02
81GO:0004806: triglyceride lipase activity3.38E-02
82GO:0030247: polysaccharide binding3.38E-02
83GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.50E-02
84GO:0046872: metal ion binding3.64E-02
85GO:0004601: peroxidase activity3.85E-02
86GO:0030145: manganese ion binding4.03E-02
87GO:0043531: ADP binding4.21E-02
88GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.30E-02
89GO:0004842: ubiquitin-protein transferase activity4.49E-02
90GO:0050661: NADP binding4.71E-02
91GO:0004497: monooxygenase activity4.76E-02
RankGO TermAdjusted P value
1GO:0005618: cell wall6.96E-04
2GO:0005576: extracellular region1.08E-03
3GO:0016021: integral component of membrane1.13E-03
4GO:0005886: plasma membrane1.31E-03
5GO:0046930: pore complex4.74E-03
6GO:0019773: proteasome core complex, alpha-subunit complex4.74E-03
7GO:0031966: mitochondrial membrane9.38E-03
8GO:0031969: chloroplast membrane1.07E-02
9GO:0048046: apoplast1.18E-02
10GO:0070469: respiratory chain1.31E-02
11GO:0005741: mitochondrial outer membrane1.40E-02
12GO:0005839: proteasome core complex1.40E-02
13GO:0005783: endoplasmic reticulum1.97E-02
14GO:0005770: late endosome1.99E-02
15GO:0000145: exocyst2.42E-02
16GO:0016592: mediator complex2.42E-02
17GO:0071944: cell periphery2.54E-02
18GO:0005788: endoplasmic reticulum lumen3.13E-02
19GO:0009707: chloroplast outer membrane3.63E-02
20GO:0009505: plant-type cell wall3.91E-02
21GO:0000325: plant-type vacuole4.03E-02
22GO:0005819: spindle4.57E-02
Gene type



Gene DE type