co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G35320

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015822: ornithine transport	0.00E+00
2	GO:0009715: chalcone biosynthetic process	0.00E+00
3	GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene	0.00E+00
4	GO:1901038: cyanidin 3-O-glucoside metabolic process	0.00E+00
5	GO:0071555: cell wall organization	7.38E-08
6	GO:0080167: response to karrikin	6.32E-07
7	GO:0009813: flavonoid biosynthetic process	2.62E-06
8	GO:0051555: flavonol biosynthetic process	1.54E-05
9	GO:0010076: maintenance of floral meristem identity	1.24E-04
10	GO:0045489: pectin biosynthetic process	1.80E-04
11	GO:0009741: response to brassinosteroid	1.80E-04
12	GO:0010224: response to UV-B	2.17E-04
13	GO:1901349: glucosinolate transport	2.34E-04
14	GO:0090449: phloem glucosinolate loading	2.34E-04
15	GO:0050691: regulation of defense response to virus by host	2.34E-04
16	GO:0006659: phosphatidylserine biosynthetic process	2.34E-04
17	GO:0033481: galacturonate biosynthetic process	2.34E-04
18	GO:0048438: floral whorl development	2.34E-04
19	GO:0000066: mitochondrial ornithine transport	2.34E-04
20	GO:0009733: response to auxin	2.52E-04
21	GO:0000272: polysaccharide catabolic process	5.04E-04
22	GO:0009629: response to gravity	5.20E-04
23	GO:0007154: cell communication	5.20E-04
24	GO:0071497: cellular response to freezing	5.20E-04
25	GO:0010220: positive regulation of vernalization response	5.20E-04
26	GO:1900386: positive regulation of flavonol biosynthetic process	5.20E-04
27	GO:0071395: cellular response to jasmonic acid stimulus	5.20E-04
28	GO:0010218: response to far red light	6.31E-04
29	GO:0030036: actin cytoskeleton organization	6.54E-04
30	GO:0009718: anthocyanin-containing compound biosynthetic process	6.54E-04
31	GO:0009225: nucleotide-sugar metabolic process	8.23E-04
32	GO:0010253: UDP-rhamnose biosynthetic process	8.44E-04
33	GO:0010114: response to red light	1.03E-03
34	GO:0042546: cell wall biogenesis	1.08E-03
35	GO:0009695: jasmonic acid biosynthetic process	1.11E-03
36	GO:0051016: barbed-end actin filament capping	1.20E-03
37	GO:0009963: positive regulation of flavonoid biosynthetic process	1.20E-03
38	GO:1902358: sulfate transmembrane transport	1.20E-03
39	GO:0031408: oxylipin biosynthetic process	1.21E-03
40	GO:0009411: response to UV	1.44E-03
41	GO:0019722: calcium-mediated signaling	1.57E-03
42	GO:0048442: sepal development	1.61E-03
43	GO:0009765: photosynthesis, light harvesting	1.61E-03
44	GO:0034440: lipid oxidation	1.61E-03
45	GO:0006021: inositol biosynthetic process	1.61E-03
46	GO:0009694: jasmonic acid metabolic process	1.61E-03
47	GO:0016117: carotenoid biosynthetic process	1.70E-03
48	GO:0000271: polysaccharide biosynthetic process	1.83E-03
49	GO:0016120: carotene biosynthetic process	2.05E-03
50	GO:0071368: cellular response to cytokinin stimulus	2.05E-03
51	GO:0009791: post-embryonic development	2.27E-03
52	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.43E-03
53	GO:0042732: D-xylose metabolic process	2.52E-03
54	GO:0010315: auxin efflux	2.52E-03
55	GO:0000060: protein import into nucleus, translocation	2.52E-03
56	GO:0010304: PSII associated light-harvesting complex II catabolic process	2.52E-03
57	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	2.52E-03
58	GO:0010583: response to cyclopentenone	2.60E-03
59	GO:0009828: plant-type cell wall loosening	2.94E-03
60	GO:0045926: negative regulation of growth	3.03E-03
61	GO:0017148: negative regulation of translation	3.03E-03
62	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.03E-03
63	GO:0010077: maintenance of inflorescence meristem identity	3.03E-03
64	GO:0007267: cell-cell signaling	3.12E-03
65	GO:0050829: defense response to Gram-negative bacterium	3.58E-03
66	GO:0051510: regulation of unidimensional cell growth	3.58E-03
67	GO:0045010: actin nucleation	4.15E-03
68	GO:0031540: regulation of anthocyanin biosynthetic process	4.15E-03
69	GO:0022900: electron transport chain	4.74E-03
70	GO:0009056: catabolic process	5.37E-03
71	GO:0009739: response to gibberellin	5.39E-03
72	GO:0016051: carbohydrate biosynthetic process	5.79E-03
73	GO:0009637: response to blue light	5.79E-03
74	GO:0009638: phototropism	6.03E-03
75	GO:0010192: mucilage biosynthetic process	6.71E-03
76	GO:0009970: cellular response to sulfate starvation	6.71E-03
77	GO:0048441: petal development	6.71E-03
78	GO:0043069: negative regulation of programmed cell death	6.71E-03
79	GO:0000038: very long-chain fatty acid metabolic process	7.43E-03
80	GO:0009698: phenylpropanoid metabolic process	7.43E-03
81	GO:0009926: auxin polar transport	7.46E-03
82	GO:0009826: unidimensional cell growth	7.77E-03
83	GO:0016024: CDP-diacylglycerol biosynthetic process	8.17E-03
84	GO:0010582: floral meristem determinacy	8.17E-03
85	GO:0016925: protein sumoylation	8.17E-03
86	GO:0018107: peptidyl-threonine phosphorylation	8.93E-03
87	GO:0031347: regulation of defense response	9.04E-03
88	GO:0000165: MAPK cascade	9.04E-03
89	GO:0034605: cellular response to heat	9.72E-03
90	GO:0010143: cutin biosynthetic process	9.72E-03
91	GO:0048440: carpel development	9.72E-03
92	GO:0002237: response to molecule of bacterial origin	9.72E-03
93	GO:0010223: secondary shoot formation	9.72E-03
94	GO:0009934: regulation of meristem structural organization	9.72E-03
95	GO:0030154: cell differentiation	1.00E-02
96	GO:0009909: regulation of flower development	1.12E-02
97	GO:0009833: plant-type primary cell wall biogenesis	1.14E-02
98	GO:0006833: water transport	1.14E-02
99	GO:0019762: glucosinolate catabolic process	1.14E-02
100	GO:0005992: trehalose biosynthetic process	1.22E-02
101	GO:0006487: protein N-linked glycosylation	1.22E-02
102	GO:0019953: sexual reproduction	1.31E-02
103	GO:0009768: photosynthesis, light harvesting in photosystem I	1.31E-02
104	GO:0010017: red or far-red light signaling pathway	1.50E-02
105	GO:0006730: one-carbon metabolic process	1.50E-02
106	GO:0009742: brassinosteroid mediated signaling pathway	1.52E-02
107	GO:0040007: growth	1.59E-02
108	GO:0010584: pollen exine formation	1.69E-02
109	GO:0048443: stamen development	1.69E-02
110	GO:0042127: regulation of cell proliferation	1.69E-02
111	GO:0009751: response to salicylic acid	1.73E-02
112	GO:0015991: ATP hydrolysis coupled proton transport	1.89E-02
113	GO:0048653: anther development	1.89E-02
114	GO:0034220: ion transmembrane transport	1.89E-02
115	GO:0009753: response to jasmonic acid	1.92E-02
116	GO:0009958: positive gravitropism	1.99E-02
117	GO:0015986: ATP synthesis coupled proton transport	2.10E-02
118	GO:0007059: chromosome segregation	2.10E-02
119	GO:0008654: phospholipid biosynthetic process	2.20E-02
120	GO:0071554: cell wall organization or biogenesis	2.31E-02
121	GO:0002229: defense response to oomycetes	2.31E-02
122	GO:0040008: regulation of growth	2.38E-02
123	GO:0007264: small GTPase mediated signal transduction	2.42E-02
124	GO:0006468: protein phosphorylation	2.48E-02
125	GO:1901657: glycosyl compound metabolic process	2.54E-02
126	GO:0051607: defense response to virus	2.89E-02
127	GO:0009911: positive regulation of flower development	3.01E-02
128	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.13E-02
129	GO:0010411: xyloglucan metabolic process	3.38E-02
130	GO:0048573: photoperiodism, flowering	3.38E-02
131	GO:0016311: dephosphorylation	3.50E-02
132	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	3.57E-02
133	GO:0030244: cellulose biosynthetic process	3.63E-02
134	GO:0018298: protein-chromophore linkage	3.63E-02
135	GO:0009611: response to wounding	3.70E-02
136	GO:0009832: plant-type cell wall biogenesis	3.76E-02
137	GO:0010119: regulation of stomatal movement	4.03E-02
138	GO:0007568: aging	4.03E-02
139	GO:0009860: pollen tube growth	4.14E-02
140	GO:0045893: positive regulation of transcription, DNA-templated	4.27E-02
141	GO:0009867: jasmonic acid mediated signaling pathway	4.30E-02
142	GO:0006839: mitochondrial transport	4.71E-02
143	GO:0006810: transport	4.90E-02
144	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity	0.00E+00
2	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
3	GO:0045552: dihydrokaempferol 4-reductase activity	0.00E+00
4	GO:0016210: naringenin-chalcone synthase activity	0.00E+00
5	GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity	0.00E+00
6	GO:0030795: jasmonate O-methyltransferase activity	0.00E+00
7	GO:0102078: methyl jasmonate methylesterase activity	0.00E+00
8	GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity	0.00E+00
9	GO:0047890: flavanone 4-reductase activity	0.00E+00
10	GO:0045486: naringenin 3-dioxygenase activity	0.00E+00
11	GO:0016719: carotene 7,8-desaturase activity	0.00E+00
12	GO:0045430: chalcone isomerase activity	3.85E-05
13	GO:0016161: beta-amylase activity	1.24E-04
14	GO:0016757: transferase activity, transferring glycosyl groups	1.34E-04
15	GO:0080132: fatty acid alpha-hydroxylase activity	2.34E-04
16	GO:0010313: phytochrome binding	2.34E-04
17	GO:0090448: glucosinolate:proton symporter activity	2.34E-04
18	GO:0016759: cellulose synthase activity	3.14E-04
19	GO:0010280: UDP-L-rhamnose synthase activity	5.20E-04
20	GO:0000064: L-ornithine transmembrane transporter activity	5.20E-04
21	GO:0050377: UDP-glucose 4,6-dehydratase activity	5.20E-04
22	GO:0004512: inositol-3-phosphate synthase activity	5.20E-04
23	GO:0048531: beta-1,3-galactosyltransferase activity	5.20E-04
24	GO:0080109: indole-3-acetonitrile nitrile hydratase activity	5.20E-04
25	GO:0008460: dTDP-glucose 4,6-dehydratase activity	5.20E-04
26	GO:0080061: indole-3-acetonitrile nitrilase activity	8.44E-04
27	GO:0016165: linoleate 13S-lipoxygenase activity	8.44E-04
28	GO:0031418: L-ascorbic acid binding	1.01E-03
29	GO:0000257: nitrilase activity	1.20E-03
30	GO:0048027: mRNA 5'-UTR binding	1.20E-03
31	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	1.20E-03
32	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.33E-03
33	GO:0080032: methyl jasmonate esterase activity	1.61E-03
34	GO:0098599: palmitoyl hydrolase activity	1.61E-03
35	GO:0046527: glucosyltransferase activity	1.61E-03
36	GO:0050378: UDP-glucuronate 4-epimerase activity	1.61E-03
37	GO:0031386: protein tag	2.05E-03
38	GO:0045431: flavonol synthase activity	2.05E-03
39	GO:0080030: methyl indole-3-acetate esterase activity	2.52E-03
40	GO:0008474: palmitoyl-(protein) hydrolase activity	2.52E-03
41	GO:0008429: phosphatidylethanolamine binding	2.52E-03
42	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.52E-03
43	GO:0102229: amylopectin maltohydrolase activity	2.52E-03
44	GO:0035252: UDP-xylosyltransferase activity	2.52E-03
45	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.52E-03
46	GO:0016621: cinnamoyl-CoA reductase activity	3.58E-03
47	GO:0008271: secondary active sulfate transmembrane transporter activity	4.74E-03
48	GO:0016207: 4-coumarate-CoA ligase activity	5.37E-03
49	GO:0004805: trehalose-phosphatase activity	6.71E-03
50	GO:0046961: proton-transporting ATPase activity, rotational mechanism	7.43E-03
51	GO:0015116: sulfate transmembrane transporter activity	8.17E-03
52	GO:0016788: hydrolase activity, acting on ester bonds	8.35E-03
53	GO:0004089: carbonate dehydratase activity	8.93E-03
54	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.72E-03
55	GO:0031409: pigment binding	1.14E-02
56	GO:0052689: carboxylic ester hydrolase activity	1.22E-02
57	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.31E-02
58	GO:0004650: polygalacturonase activity	1.31E-02
59	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.31E-02
60	GO:0016491: oxidoreductase activity	1.39E-02
61	GO:0004176: ATP-dependent peptidase activity	1.40E-02
62	GO:0016760: cellulose synthase (UDP-forming) activity	1.59E-02
63	GO:0016758: transferase activity, transferring hexosyl groups	1.76E-02
64	GO:0016829: lyase activity	1.95E-02
65	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.05E-02
66	GO:0016853: isomerase activity	2.10E-02
67	GO:0050662: coenzyme binding	2.10E-02
68	GO:0019901: protein kinase binding	2.20E-02
69	GO:0004674: protein serine/threonine kinase activity	2.23E-02
70	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.31E-02
71	GO:0004518: nuclease activity	2.42E-02
72	GO:0051015: actin filament binding	2.54E-02
73	GO:0016791: phosphatase activity	2.65E-02
74	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.77E-02
75	GO:0008237: metallopeptidase activity	2.77E-02
76	GO:0005200: structural constituent of cytoskeleton	2.77E-02
77	GO:0044212: transcription regulatory region DNA binding	2.81E-02
78	GO:0016413: O-acetyltransferase activity	2.89E-02
79	GO:0015250: water channel activity	3.01E-02
80	GO:0016887: ATPase activity	3.05E-02
81	GO:0016168: chlorophyll binding	3.13E-02
82	GO:0003824: catalytic activity	3.22E-02
83	GO:0008375: acetylglucosaminyltransferase activity	3.25E-02
84	GO:0005215: transporter activity	3.26E-02
85	GO:0102483: scopolin beta-glucosidase activity	3.38E-02
86	GO:0030247: polysaccharide binding	3.38E-02
87	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.38E-02
88	GO:0046982: protein heterodimerization activity	3.78E-02
89	GO:0004222: metalloendopeptidase activity	3.89E-02
90	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.89E-02
91	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.30E-02
92	GO:0008422: beta-glucosidase activity	4.57E-02
93	GO:0004672: protein kinase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0042406: extrinsic component of endoplasmic reticulum membrane	9.29E-06
2	GO:0009505: plant-type cell wall	3.35E-04
3	GO:0005794: Golgi apparatus	3.46E-04
4	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	5.20E-04
5	GO:0009509: chromoplast	8.44E-04
6	GO:0031225: anchored component of membrane	1.51E-03
7	GO:0009506: plasmodesma	1.56E-03
8	GO:0016021: integral component of membrane	3.08E-03
9	GO:0000139: Golgi membrane	4.60E-03
10	GO:0046658: anchored component of plasma membrane	6.68E-03
11	GO:0005765: lysosomal membrane	7.43E-03
12	GO:0048471: perinuclear region of cytoplasm	7.43E-03
13	GO:0005753: mitochondrial proton-transporting ATP synthase complex	1.05E-02
14	GO:0030076: light-harvesting complex	1.05E-02
15	GO:0005618: cell wall	1.42E-02
16	GO:0005886: plasma membrane	1.69E-02
17	GO:0009522: photosystem I	2.10E-02
18	GO:0009523: photosystem II	2.20E-02
19	GO:0009705: plant-type vacuole membrane	2.49E-02
20	GO:0071944: cell periphery	2.54E-02
21	GO:0032580: Golgi cisterna membrane	2.65E-02
22	GO:0005615: extracellular space	2.79E-02
23	GO:0005576: extracellular region	2.98E-02
24	GO:0000786: nucleosome	4.16E-02
25	GO:0005783: endoplasmic reticulum	4.50E-02
26	GO:0005819: spindle	4.57E-02
27	GO:0031902: late endosome membrane	4.85E-02