co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G35220

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032497: detection of lipopolysaccharide	0.00E+00
2	GO:0045022: early endosome to late endosome transport	0.00E+00
3	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
4	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
5	GO:0006624: vacuolar protein processing	4.93E-06
6	GO:1903409: reactive oxygen species biosynthetic process	1.02E-04
7	GO:0035494: SNARE complex disassembly	1.02E-04
8	GO:0098721: uracil import across plasma membrane	1.02E-04
9	GO:0098702: adenine import across plasma membrane	1.02E-04
10	GO:0035266: meristem growth	1.02E-04
11	GO:0098710: guanine import across plasma membrane	1.02E-04
12	GO:0007292: female gamete generation	1.02E-04
13	GO:0035344: hypoxanthine transport	1.02E-04
14	GO:0008202: steroid metabolic process	1.12E-04
15	GO:0006499: N-terminal protein myristoylation	1.37E-04
16	GO:0045087: innate immune response	1.67E-04
17	GO:1902000: homogentisate catabolic process	2.40E-04
18	GO:0019441: tryptophan catabolic process to kynurenine	2.40E-04
19	GO:0009308: amine metabolic process	2.40E-04
20	GO:0051788: response to misfolded protein	2.40E-04
21	GO:0052542: defense response by callose deposition	2.40E-04
22	GO:0061158: 3'-UTR-mediated mRNA destabilization	3.99E-04
23	GO:0009072: aromatic amino acid family metabolic process	3.99E-04
24	GO:0060968: regulation of gene silencing	3.99E-04
25	GO:0006572: tyrosine catabolic process	5.73E-04
26	GO:0070301: cellular response to hydrogen peroxide	5.73E-04
27	GO:0006809: nitric oxide biosynthetic process	5.73E-04
28	GO:0010222: stem vascular tissue pattern formation	7.62E-04
29	GO:0010337: regulation of salicylic acid metabolic process	1.17E-03
30	GO:0006014: D-ribose metabolic process	1.17E-03
31	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.17E-03
32	GO:0048827: phyllome development	1.17E-03
33	GO:0048232: male gamete generation	1.17E-03
34	GO:0043248: proteasome assembly	1.17E-03
35	GO:0006694: steroid biosynthetic process	1.40E-03
36	GO:0048280: vesicle fusion with Golgi apparatus	1.40E-03
37	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.40E-03
38	GO:0031930: mitochondria-nucleus signaling pathway	1.40E-03
39	GO:0008219: cell death	1.47E-03
40	GO:0070370: cellular heat acclimation	1.65E-03
41	GO:0006333: chromatin assembly or disassembly	1.65E-03
42	GO:0006955: immune response	1.65E-03
43	GO:0009395: phospholipid catabolic process	1.65E-03
44	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.65E-03
45	GO:0071669: plant-type cell wall organization or biogenesis	1.65E-03
46	GO:0006605: protein targeting	1.90E-03
47	GO:0010078: maintenance of root meristem identity	1.90E-03
48	GO:0009819: drought recovery	1.90E-03
49	GO:0030968: endoplasmic reticulum unfolded protein response	2.17E-03
50	GO:0046777: protein autophosphorylation	2.69E-03
51	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.74E-03
52	GO:0006535: cysteine biosynthetic process from serine	3.05E-03
53	GO:0043069: negative regulation of programmed cell death	3.05E-03
54	GO:0048829: root cap development	3.05E-03
55	GO:0006896: Golgi to vacuole transport	3.05E-03
56	GO:0051603: proteolysis involved in cellular protein catabolic process	3.30E-03
57	GO:0043085: positive regulation of catalytic activity	3.36E-03
58	GO:0006378: mRNA polyadenylation	3.36E-03
59	GO:0010015: root morphogenesis	3.36E-03
60	GO:0048367: shoot system development	3.89E-03
61	GO:0009626: plant-type hypersensitive response	4.01E-03
62	GO:0048364: root development	4.27E-03
63	GO:0034605: cellular response to heat	4.37E-03
64	GO:0009933: meristem structural organization	4.37E-03
65	GO:0090351: seedling development	4.72E-03
66	GO:0010167: response to nitrate	4.72E-03
67	GO:0019344: cysteine biosynthetic process	5.46E-03
68	GO:0045333: cellular respiration	5.46E-03
69	GO:0030433: ubiquitin-dependent ERAD pathway	6.64E-03
70	GO:0071215: cellular response to abscisic acid stimulus	7.06E-03
71	GO:0055114: oxidation-reduction process	7.23E-03
72	GO:0009306: protein secretion	7.48E-03
73	GO:0010150: leaf senescence	7.80E-03
74	GO:0042147: retrograde transport, endosome to Golgi	7.91E-03
75	GO:0000271: polysaccharide biosynthetic process	8.35E-03
76	GO:0010051: xylem and phloem pattern formation	8.35E-03
77	GO:0042631: cellular response to water deprivation	8.35E-03
78	GO:0009611: response to wounding	8.61E-03
79	GO:0006470: protein dephosphorylation	8.93E-03
80	GO:0048544: recognition of pollen	9.26E-03
81	GO:0061025: membrane fusion	9.26E-03
82	GO:0009749: response to glucose	9.73E-03
83	GO:0019252: starch biosynthetic process	9.73E-03
84	GO:0006623: protein targeting to vacuole	9.73E-03
85	GO:0006891: intra-Golgi vesicle-mediated transport	1.02E-02
86	GO:0006635: fatty acid beta-oxidation	1.02E-02
87	GO:0009630: gravitropism	1.07E-02
88	GO:0007264: small GTPase mediated signal transduction	1.07E-02
89	GO:0006904: vesicle docking involved in exocytosis	1.22E-02
90	GO:0006511: ubiquitin-dependent protein catabolic process	1.24E-02
91	GO:0051607: defense response to virus	1.27E-02
92	GO:0016126: sterol biosynthetic process	1.32E-02
93	GO:0010029: regulation of seed germination	1.38E-02
94	GO:0009816: defense response to bacterium, incompatible interaction	1.38E-02
95	GO:0048573: photoperiodism, flowering	1.48E-02
96	GO:0006950: response to stress	1.48E-02
97	GO:0006888: ER to Golgi vesicle-mediated transport	1.48E-02
98	GO:0030244: cellulose biosynthetic process	1.60E-02
99	GO:0009832: plant-type cell wall biogenesis	1.65E-02
100	GO:0048767: root hair elongation	1.65E-02
101	GO:0010311: lateral root formation	1.65E-02
102	GO:0010043: response to zinc ion	1.77E-02
103	GO:0045454: cell redox homeostasis	1.80E-02
104	GO:0006865: amino acid transport	1.83E-02
105	GO:0016051: carbohydrate biosynthetic process	1.89E-02
106	GO:0006099: tricarboxylic acid cycle	1.95E-02
107	GO:0006869: lipid transport	1.98E-02
108	GO:0006897: endocytosis	2.13E-02
109	GO:0009751: response to salicylic acid	2.19E-02
110	GO:0009965: leaf morphogenesis	2.46E-02
111	GO:0031347: regulation of defense response	2.59E-02
112	GO:0006508: proteolysis	2.65E-02
113	GO:0009409: response to cold	2.99E-02
114	GO:0009845: seed germination	4.46E-02
115	GO:0009790: embryo development	4.70E-02
116	GO:0006633: fatty acid biosynthetic process	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
2	GO:0019211: phosphatase activator activity	0.00E+00
3	GO:0004334: fumarylacetoacetase activity	0.00E+00
4	GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity	1.02E-04
5	GO:0052595: aliphatic-amine oxidase activity	1.02E-04
6	GO:0015207: adenine transmembrane transporter activity	1.02E-04
7	GO:0035671: enone reductase activity	1.02E-04
8	GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity	1.02E-04
9	GO:0001530: lipopolysaccharide binding	1.02E-04
10	GO:0015208: guanine transmembrane transporter activity	1.02E-04
11	GO:0015294: solute:cation symporter activity	1.02E-04
12	GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity	1.02E-04
13	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	2.40E-04
14	GO:0004061: arylformamidase activity	2.40E-04
15	GO:0016971: flavin-linked sulfhydryl oxidase activity	2.40E-04
16	GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	2.40E-04
17	GO:0004383: guanylate cyclase activity	3.99E-04
18	GO:0005483: soluble NSF attachment protein activity	3.99E-04
19	GO:0005047: signal recognition particle binding	3.99E-04
20	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	3.99E-04
21	GO:0004557: alpha-galactosidase activity	3.99E-04
22	GO:0004108: citrate (Si)-synthase activity	5.73E-04
23	GO:0030527: structural constituent of chromatin	5.73E-04
24	GO:0001653: peptide receptor activity	5.73E-04
25	GO:0016004: phospholipase activator activity	7.62E-04
26	GO:0009916: alternative oxidase activity	7.62E-04
27	GO:0019905: syntaxin binding	7.62E-04
28	GO:0015210: uracil transmembrane transporter activity	7.62E-04
29	GO:0004197: cysteine-type endopeptidase activity	8.55E-04
30	GO:0036402: proteasome-activating ATPase activity	1.17E-03
31	GO:0051753: mannan synthase activity	1.40E-03
32	GO:0004124: cysteine synthase activity	1.40E-03
33	GO:0004747: ribokinase activity	1.40E-03
34	GO:0008865: fructokinase activity	1.90E-03
35	GO:0008142: oxysterol binding	2.17E-03
36	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.45E-03
37	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	2.45E-03
38	GO:0047617: acyl-CoA hydrolase activity	2.74E-03
39	GO:0008794: arsenate reductase (glutaredoxin) activity	3.36E-03
40	GO:0005525: GTP binding	3.58E-03
41	GO:0004521: endoribonuclease activity	3.69E-03
42	GO:0003924: GTPase activity	4.05E-03
43	GO:0008131: primary amine oxidase activity	4.37E-03
44	GO:0004175: endopeptidase activity	4.37E-03
45	GO:0017025: TBP-class protein binding	4.72E-03
46	GO:0004725: protein tyrosine phosphatase activity	5.09E-03
47	GO:0043424: protein histidine kinase binding	5.85E-03
48	GO:0019706: protein-cysteine S-palmitoyltransferase activity	6.24E-03
49	GO:0016760: cellulose synthase (UDP-forming) activity	7.06E-03
50	GO:0003756: protein disulfide isomerase activity	7.48E-03
51	GO:0003727: single-stranded RNA binding	7.48E-03
52	GO:0004872: receptor activity	9.73E-03
53	GO:0048038: quinone binding	1.02E-02
54	GO:0016759: cellulose synthase activity	1.17E-02
55	GO:0008237: metallopeptidase activity	1.22E-02
56	GO:0016788: hydrolase activity, acting on ester bonds	1.23E-02
57	GO:0030247: polysaccharide binding	1.48E-02
58	GO:0004674: protein serine/threonine kinase activity	1.81E-02
59	GO:0003746: translation elongation factor activity	1.89E-02
60	GO:0003993: acid phosphatase activity	1.95E-02
61	GO:0000149: SNARE binding	2.01E-02
62	GO:0005484: SNAP receptor activity	2.26E-02
63	GO:0009055: electron carrier activity	2.38E-02
64	GO:0016301: kinase activity	2.48E-02
65	GO:0008234: cysteine-type peptidase activity	3.01E-02
66	GO:0015171: amino acid transmembrane transporter activity	3.01E-02
67	GO:0031625: ubiquitin protein ligase binding	3.01E-02
68	GO:0008289: lipid binding	3.09E-02
69	GO:0045735: nutrient reservoir activity	3.15E-02
70	GO:0004672: protein kinase activity	3.31E-02
71	GO:0003729: mRNA binding	3.37E-02
72	GO:0022857: transmembrane transporter activity	3.44E-02
73	GO:0015035: protein disulfide oxidoreductase activity	3.67E-02
74	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.30E-02
75	GO:0030170: pyridoxal phosphate binding	4.54E-02
76	GO:0004252: serine-type endopeptidase activity	4.54E-02
77	GO:0005524: ATP binding	4.74E-02

Rank	GO Term	Adjusted P value
1	GO:0010009: cytoplasmic side of endosome membrane	0.00E+00
2	GO:0005785: signal recognition particle receptor complex	0.00E+00
3	GO:0000323: lytic vacuole	4.93E-06
4	GO:0005773: vacuole	6.50E-06
5	GO:0030173: integral component of Golgi membrane	3.34E-05
6	GO:0005794: Golgi apparatus	2.07E-04
7	GO:0042406: extrinsic component of endoplasmic reticulum membrane	3.99E-04
8	GO:0005849: mRNA cleavage factor complex	5.73E-04
9	GO:0016021: integral component of membrane	6.66E-04
10	GO:0005802: trans-Golgi network	7.52E-04
11	GO:0005768: endosome	9.39E-04
12	GO:0030140: trans-Golgi network transport vesicle	1.17E-03
13	GO:0031597: cytosolic proteasome complex	1.40E-03
14	GO:0031595: nuclear proteasome complex	1.65E-03
15	GO:0012507: ER to Golgi transport vesicle membrane	1.90E-03
16	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.17E-03
17	GO:0031201: SNARE complex	2.19E-03
18	GO:0005789: endoplasmic reticulum membrane	2.37E-03
19	GO:0031901: early endosome membrane	2.45E-03
20	GO:0008540: proteasome regulatory particle, base subcomplex	2.74E-03
21	GO:0005774: vacuolar membrane	2.92E-03
22	GO:0005783: endoplasmic reticulum	3.86E-03
23	GO:0005886: plasma membrane	4.29E-03
24	GO:0005769: early endosome	5.09E-03
25	GO:0070469: respiratory chain	5.85E-03
26	GO:0005615: extracellular space	8.73E-03
27	GO:0005770: late endosome	8.80E-03
28	GO:0000785: chromatin	1.07E-02
29	GO:0000325: plant-type vacuole	1.77E-02
30	GO:0000786: nucleosome	1.83E-02
31	GO:0031902: late endosome membrane	2.13E-02
32	GO:0000502: proteasome complex	2.80E-02
33	GO:0009506: plasmodesma	3.82E-02
34	GO:0005777: peroxisome	4.51E-02