GO Enrichment Analysis of Co-expressed Genes with
AT4G34920
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0007172: signal complex assembly | 0.00E+00 |
| 2 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 3 | GO:1904526: regulation of microtubule binding | 0.00E+00 |
| 4 | GO:0001778: plasma membrane repair | 0.00E+00 |
| 5 | GO:0016122: xanthophyll metabolic process | 1.05E-07 |
| 6 | GO:0010207: photosystem II assembly | 6.60E-07 |
| 7 | GO:0000476: maturation of 4.5S rRNA | 4.04E-05 |
| 8 | GO:0000967: rRNA 5'-end processing | 4.04E-05 |
| 9 | GO:0010028: xanthophyll cycle | 4.04E-05 |
| 10 | GO:0035304: regulation of protein dephosphorylation | 1.00E-04 |
| 11 | GO:0046740: transport of virus in host, cell to cell | 1.00E-04 |
| 12 | GO:0034470: ncRNA processing | 1.00E-04 |
| 13 | GO:0006612: protein targeting to membrane | 2.55E-04 |
| 14 | GO:0032456: endocytic recycling | 2.55E-04 |
| 15 | GO:0042938: dipeptide transport | 3.43E-04 |
| 16 | GO:0015994: chlorophyll metabolic process | 3.43E-04 |
| 17 | GO:0010117: photoprotection | 4.37E-04 |
| 18 | GO:0042549: photosystem II stabilization | 5.37E-04 |
| 19 | GO:0045926: negative regulation of growth | 6.40E-04 |
| 20 | GO:0009612: response to mechanical stimulus | 6.40E-04 |
| 21 | GO:0009942: longitudinal axis specification | 6.40E-04 |
| 22 | GO:0009640: photomorphogenesis | 7.35E-04 |
| 23 | GO:0050829: defense response to Gram-negative bacterium | 7.49E-04 |
| 24 | GO:0006353: DNA-templated transcription, termination | 8.61E-04 |
| 25 | GO:0009642: response to light intensity | 8.61E-04 |
| 26 | GO:0007389: pattern specification process | 9.77E-04 |
| 27 | GO:0048507: meristem development | 1.10E-03 |
| 28 | GO:0010206: photosystem II repair | 1.10E-03 |
| 29 | GO:0010205: photoinhibition | 1.22E-03 |
| 30 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.22E-03 |
| 31 | GO:0009688: abscisic acid biosynthetic process | 1.35E-03 |
| 32 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.35E-03 |
| 33 | GO:0019684: photosynthesis, light reaction | 1.49E-03 |
| 34 | GO:0043085: positive regulation of catalytic activity | 1.49E-03 |
| 35 | GO:0015706: nitrate transport | 1.63E-03 |
| 36 | GO:0006094: gluconeogenesis | 1.77E-03 |
| 37 | GO:0009934: regulation of meristem structural organization | 1.92E-03 |
| 38 | GO:0007017: microtubule-based process | 2.55E-03 |
| 39 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.55E-03 |
| 40 | GO:0010305: leaf vascular tissue pattern formation | 3.80E-03 |
| 41 | GO:0006662: glycerol ether metabolic process | 3.80E-03 |
| 42 | GO:0007018: microtubule-based movement | 3.99E-03 |
| 43 | GO:0010583: response to cyclopentenone | 4.58E-03 |
| 44 | GO:0016032: viral process | 4.58E-03 |
| 45 | GO:0010252: auxin homeostasis | 5.00E-03 |
| 46 | GO:0015979: photosynthesis | 5.04E-03 |
| 47 | GO:0009615: response to virus | 5.64E-03 |
| 48 | GO:0015995: chlorophyll biosynthetic process | 6.31E-03 |
| 49 | GO:0016311: dephosphorylation | 6.54E-03 |
| 50 | GO:0018298: protein-chromophore linkage | 6.77E-03 |
| 51 | GO:0048364: root development | 6.78E-03 |
| 52 | GO:0010218: response to far red light | 7.25E-03 |
| 53 | GO:0007568: aging | 7.49E-03 |
| 54 | GO:0009910: negative regulation of flower development | 7.49E-03 |
| 55 | GO:0009637: response to blue light | 7.99E-03 |
| 56 | GO:0034599: cellular response to oxidative stress | 8.24E-03 |
| 57 | GO:0006897: endocytosis | 9.01E-03 |
| 58 | GO:0006631: fatty acid metabolic process | 9.01E-03 |
| 59 | GO:0010114: response to red light | 9.53E-03 |
| 60 | GO:0009926: auxin polar transport | 9.53E-03 |
| 61 | GO:0006857: oligopeptide transport | 1.23E-02 |
| 62 | GO:0006096: glycolytic process | 1.32E-02 |
| 63 | GO:0042545: cell wall modification | 1.48E-02 |
| 64 | GO:0009790: embryo development | 1.97E-02 |
| 65 | GO:0006413: translational initiation | 2.12E-02 |
| 66 | GO:0045490: pectin catabolic process | 2.22E-02 |
| 67 | GO:0006470: protein dephosphorylation | 2.45E-02 |
| 68 | GO:0009409: response to cold | 3.18E-02 |
| 69 | GO:0005975: carbohydrate metabolic process | 3.56E-02 |
| 70 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.63E-02 |
| 71 | GO:0044550: secondary metabolite biosynthetic process | 3.76E-02 |
| 72 | GO:0045454: cell redox homeostasis | 4.02E-02 |
| 73 | GO:0045892: negative regulation of transcription, DNA-templated | 4.07E-02 |
| 74 | GO:0006869: lipid transport | 4.30E-02 |
| 75 | GO:0009408: response to heat | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 2 | GO:0004462: lactoylglutathione lyase activity | 5.05E-06 |
| 3 | GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity | 4.04E-05 |
| 4 | GO:0010242: oxygen evolving activity | 4.04E-05 |
| 5 | GO:1901981: phosphatidylinositol phosphate binding | 1.00E-04 |
| 6 | GO:0019172: glyoxalase III activity | 1.00E-04 |
| 7 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.00E-04 |
| 8 | GO:0016805: dipeptidase activity | 1.73E-04 |
| 9 | GO:0004180: carboxypeptidase activity | 1.73E-04 |
| 10 | GO:0042936: dipeptide transporter activity | 3.43E-04 |
| 11 | GO:0004045: aminoacyl-tRNA hydrolase activity | 3.43E-04 |
| 12 | GO:0016846: carbon-sulfur lyase activity | 4.37E-04 |
| 13 | GO:0004332: fructose-bisphosphate aldolase activity | 5.37E-04 |
| 14 | GO:0009672: auxin:proton symporter activity | 1.22E-03 |
| 15 | GO:0008289: lipid binding | 1.30E-03 |
| 16 | GO:0008047: enzyme activator activity | 1.35E-03 |
| 17 | GO:0010329: auxin efflux transmembrane transporter activity | 1.77E-03 |
| 18 | GO:0009982: pseudouridine synthase activity | 1.77E-03 |
| 19 | GO:0008266: poly(U) RNA binding | 1.92E-03 |
| 20 | GO:0031409: pigment binding | 2.23E-03 |
| 21 | GO:0033612: receptor serine/threonine kinase binding | 2.72E-03 |
| 22 | GO:0047134: protein-disulfide reductase activity | 3.42E-03 |
| 23 | GO:0008536: Ran GTPase binding | 3.80E-03 |
| 24 | GO:0004791: thioredoxin-disulfide reductase activity | 3.99E-03 |
| 25 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 4.79E-03 |
| 26 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 5.21E-03 |
| 27 | GO:0005200: structural constituent of cytoskeleton | 5.21E-03 |
| 28 | GO:0016168: chlorophyll binding | 5.86E-03 |
| 29 | GO:0003993: acid phosphatase activity | 8.24E-03 |
| 30 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 8.49E-03 |
| 31 | GO:0043621: protein self-association | 1.01E-02 |
| 32 | GO:0045330: aspartyl esterase activity | 1.26E-02 |
| 33 | GO:0003777: microtubule motor activity | 1.26E-02 |
| 34 | GO:0030599: pectinesterase activity | 1.45E-02 |
| 35 | GO:0015035: protein disulfide oxidoreductase activity | 1.54E-02 |
| 36 | GO:0005515: protein binding | 1.74E-02 |
| 37 | GO:0016829: lyase activity | 1.87E-02 |
| 38 | GO:0004252: serine-type endopeptidase activity | 1.91E-02 |
| 39 | GO:0046910: pectinesterase inhibitor activity | 2.12E-02 |
| 40 | GO:0008017: microtubule binding | 2.30E-02 |
| 41 | GO:0003743: translation initiation factor activity | 2.48E-02 |
| 42 | GO:0005215: transporter activity | 2.60E-02 |
| 43 | GO:0003682: chromatin binding | 3.16E-02 |
| 44 | GO:0004871: signal transducer activity | 4.16E-02 |
| 45 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 4.25E-02 |
| 46 | GO:0004722: protein serine/threonine phosphatase activity | 4.30E-02 |
| 47 | GO:0003924: GTPase activity | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0009534: chloroplast thylakoid | 3.81E-12 |
| 3 | GO:0009507: chloroplast | 1.16E-09 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 1.60E-07 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 7.29E-07 |
| 6 | GO:0031977: thylakoid lumen | 7.88E-07 |
| 7 | GO:0009579: thylakoid | 3.52E-05 |
| 8 | GO:0032541: cortical endoplasmic reticulum | 4.04E-05 |
| 9 | GO:0030095: chloroplast photosystem II | 6.26E-05 |
| 10 | GO:0010287: plastoglobule | 1.36E-04 |
| 11 | GO:0009898: cytoplasmic side of plasma membrane | 3.43E-04 |
| 12 | GO:0009517: PSII associated light-harvesting complex II | 3.43E-04 |
| 13 | GO:0055035: plastid thylakoid membrane | 4.37E-04 |
| 14 | GO:0009941: chloroplast envelope | 4.45E-04 |
| 15 | GO:0009538: photosystem I reaction center | 8.61E-04 |
| 16 | GO:0045298: tubulin complex | 1.10E-03 |
| 17 | GO:0030076: light-harvesting complex | 2.07E-03 |
| 18 | GO:0009654: photosystem II oxygen evolving complex | 2.55E-03 |
| 19 | GO:0016020: membrane | 2.72E-03 |
| 20 | GO:0009570: chloroplast stroma | 3.41E-03 |
| 21 | GO:0005871: kinesin complex | 3.42E-03 |
| 22 | GO:0009522: photosystem I | 3.99E-03 |
| 23 | GO:0009523: photosystem II | 4.19E-03 |
| 24 | GO:0019898: extrinsic component of membrane | 4.19E-03 |
| 25 | GO:0005874: microtubule | 4.27E-03 |
| 26 | GO:0071944: cell periphery | 4.79E-03 |
| 27 | GO:0000325: plant-type vacuole | 7.49E-03 |
| 28 | GO:0010008: endosome membrane | 1.35E-02 |
| 29 | GO:0005623: cell | 1.80E-02 |
| 30 | GO:0005618: cell wall | 2.46E-02 |
| 31 | GO:0031969: chloroplast membrane | 3.54E-02 |
| 32 | GO:0009506: plasmodesma | 3.67E-02 |