co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G34460

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070291: N-acylethanolamine metabolic process	0.00E+00
2	GO:0000188: inactivation of MAPK activity	0.00E+00
3	GO:0016236: macroautophagy	0.00E+00
4	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
5	GO:0006593: ornithine catabolic process	0.00E+00
6	GO:0010111: glyoxysome organization	0.00E+00
7	GO:0048227: plasma membrane to endosome transport	0.00E+00
8	GO:0033587: shikimate biosynthetic process	0.00E+00
9	GO:0006468: protein phosphorylation	1.12E-06
10	GO:0006623: protein targeting to vacuole	4.05E-06
11	GO:0006014: D-ribose metabolic process	5.10E-05
12	GO:0019544: arginine catabolic process to glutamate	1.64E-04
13	GO:0098721: uracil import across plasma membrane	1.64E-04
14	GO:0098702: adenine import across plasma membrane	1.64E-04
15	GO:0080120: CAAX-box protein maturation	1.64E-04
16	GO:0098710: guanine import across plasma membrane	1.64E-04
17	GO:0051315: attachment of mitotic spindle microtubules to kinetochore	1.64E-04
18	GO:0071586: CAAX-box protein processing	1.64E-04
19	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	1.64E-04
20	GO:0030242: pexophagy	1.64E-04
21	GO:0006422: aspartyl-tRNA aminoacylation	1.64E-04
22	GO:0035344: hypoxanthine transport	1.64E-04
23	GO:0007093: mitotic cell cycle checkpoint	1.64E-04
24	GO:0034214: protein hexamerization	1.64E-04
25	GO:0008202: steroid metabolic process	2.25E-04
26	GO:0006896: Golgi to vacuole transport	2.65E-04
27	GO:0006633: fatty acid biosynthetic process	3.39E-04
28	GO:0000266: mitochondrial fission	3.54E-04
29	GO:0019441: tryptophan catabolic process to kynurenine	3.73E-04
30	GO:0019395: fatty acid oxidation	3.73E-04
31	GO:0050994: regulation of lipid catabolic process	3.73E-04
32	GO:0006212: uracil catabolic process	3.73E-04
33	GO:0007584: response to nutrient	3.73E-04
34	GO:0019483: beta-alanine biosynthetic process	3.73E-04
35	GO:0015865: purine nucleotide transport	3.73E-04
36	GO:0051258: protein polymerization	3.73E-04
37	GO:0006631: fatty acid metabolic process	5.00E-04
38	GO:0048281: inflorescence morphogenesis	6.11E-04
39	GO:0051646: mitochondrion localization	6.11E-04
40	GO:0010359: regulation of anion channel activity	6.11E-04
41	GO:0061158: 3'-UTR-mediated mRNA destabilization	6.11E-04
42	GO:2000114: regulation of establishment of cell polarity	8.73E-04
43	GO:0046902: regulation of mitochondrial membrane permeability	8.73E-04
44	GO:0043481: anthocyanin accumulation in tissues in response to UV light	8.73E-04
45	GO:0072583: clathrin-dependent endocytosis	8.73E-04
46	GO:0006096: glycolytic process	9.90E-04
47	GO:0035556: intracellular signal transduction	1.14E-03
48	GO:0070534: protein K63-linked ubiquitination	1.16E-03
49	GO:0033320: UDP-D-xylose biosynthetic process	1.16E-03
50	GO:0010107: potassium ion import	1.16E-03
51	GO:0045324: late endosome to vacuole transport	1.16E-03
52	GO:0019252: starch biosynthetic process	1.40E-03
53	GO:0007094: mitotic spindle assembly checkpoint	1.47E-03
54	GO:0010225: response to UV-C	1.47E-03
55	GO:0006635: fatty acid beta-oxidation	1.49E-03
56	GO:0009630: gravitropism	1.59E-03
57	GO:0010583: response to cyclopentenone	1.59E-03
58	GO:0006914: autophagy	1.80E-03
59	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.80E-03
60	GO:0006561: proline biosynthetic process	1.80E-03
61	GO:0006301: postreplication repair	1.80E-03
62	GO:0070814: hydrogen sulfide biosynthetic process	1.80E-03
63	GO:0042732: D-xylose metabolic process	1.80E-03
64	GO:1902456: regulation of stomatal opening	1.80E-03
65	GO:0033365: protein localization to organelle	1.80E-03
66	GO:0048280: vesicle fusion with Golgi apparatus	2.17E-03
67	GO:0046686: response to cadmium ion	2.24E-03
68	GO:0046470: phosphatidylcholine metabolic process	2.55E-03
69	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	2.55E-03
70	GO:0071669: plant-type cell wall organization or biogenesis	2.55E-03
71	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	2.55E-03
72	GO:0048767: root hair elongation	2.93E-03
73	GO:0016559: peroxisome fission	2.95E-03
74	GO:0009819: drought recovery	2.95E-03
75	GO:0048766: root hair initiation	2.95E-03
76	GO:0006605: protein targeting	2.95E-03
77	GO:0019375: galactolipid biosynthetic process	2.95E-03
78	GO:0043562: cellular response to nitrogen levels	3.37E-03
79	GO:0009699: phenylpropanoid biosynthetic process	3.37E-03
80	GO:0009827: plant-type cell wall modification	3.37E-03
81	GO:0006098: pentose-phosphate shunt	3.81E-03
82	GO:0090305: nucleic acid phosphodiester bond hydrolysis	3.81E-03
83	GO:0000209: protein polyubiquitination	4.71E-03
84	GO:0043069: negative regulation of programmed cell death	4.75E-03
85	GO:0007064: mitotic sister chromatid cohesion	4.75E-03
86	GO:0019538: protein metabolic process	4.75E-03
87	GO:0006535: cysteine biosynthetic process from serine	4.75E-03
88	GO:0000103: sulfate assimilation	4.75E-03
89	GO:0048765: root hair cell differentiation	5.25E-03
90	GO:0009698: phenylpropanoid metabolic process	5.25E-03
91	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	5.48E-03
92	GO:0009809: lignin biosynthetic process	6.10E-03
93	GO:0046777: protein autophosphorylation	6.17E-03
94	GO:0055046: microgametogenesis	6.30E-03
95	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	6.30E-03
96	GO:0010224: response to UV-B	6.31E-03
97	GO:0055085: transmembrane transport	6.56E-03
98	GO:0007034: vacuolar transport	6.85E-03
99	GO:0070588: calcium ion transmembrane transport	7.41E-03
100	GO:0010053: root epidermal cell differentiation	7.41E-03
101	GO:0009225: nucleotide-sugar metabolic process	7.41E-03
102	GO:0010167: response to nitrate	7.41E-03
103	GO:0010039: response to iron ion	7.41E-03
104	GO:0019344: cysteine biosynthetic process	8.59E-03
105	GO:0018105: peptidyl-serine phosphorylation	8.94E-03
106	GO:0009695: jasmonic acid biosynthetic process	9.21E-03
107	GO:0031408: oxylipin biosynthetic process	9.84E-03
108	GO:0007005: mitochondrion organization	1.05E-02
109	GO:0030433: ubiquitin-dependent ERAD pathway	1.05E-02
110	GO:0009561: megagametogenesis	1.18E-02
111	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.25E-02
112	GO:0042147: retrograde transport, endosome to Golgi	1.25E-02
113	GO:0000271: polysaccharide biosynthetic process	1.32E-02
114	GO:0010118: stomatal movement	1.32E-02
115	GO:0042335: cuticle development	1.32E-02
116	GO:0009737: response to abscisic acid	1.34E-02
117	GO:0010150: leaf senescence	1.51E-02
118	GO:0008654: phospholipid biosynthetic process	1.54E-02
119	GO:0009749: response to glucose	1.54E-02
120	GO:0071554: cell wall organization or biogenesis	1.62E-02
121	GO:0006891: intra-Golgi vesicle-mediated transport	1.62E-02
122	GO:0007264: small GTPase mediated signal transduction	1.70E-02
123	GO:0006470: protein dephosphorylation	1.72E-02
124	GO:0009738: abscisic acid-activated signaling pathway	1.85E-02
125	GO:0015031: protein transport	1.91E-02
126	GO:0051607: defense response to virus	2.02E-02
127	GO:0010029: regulation of seed germination	2.19E-02
128	GO:0009816: defense response to bacterium, incompatible interaction	2.19E-02
129	GO:0006950: response to stress	2.36E-02
130	GO:0006888: ER to Golgi vesicle-mediated transport	2.36E-02
131	GO:0006970: response to osmotic stress	2.51E-02
132	GO:0030244: cellulose biosynthetic process	2.54E-02
133	GO:0009832: plant-type cell wall biogenesis	2.63E-02
134	GO:0010311: lateral root formation	2.63E-02
135	GO:0006811: ion transport	2.72E-02
136	GO:0010043: response to zinc ion	2.82E-02
137	GO:0010119: regulation of stomatal movement	2.82E-02
138	GO:0006511: ubiquitin-dependent protein catabolic process	2.83E-02
139	GO:0009651: response to salt stress	2.88E-02
140	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.99E-02
141	GO:0016051: carbohydrate biosynthetic process	3.01E-02
142	GO:0045087: innate immune response	3.01E-02
143	GO:0006839: mitochondrial transport	3.30E-02
144	GO:0051707: response to other organism	3.60E-02
145	GO:0006869: lipid transport	3.79E-02
146	GO:0007165: signal transduction	3.93E-02
147	GO:0031347: regulation of defense response	4.12E-02
148	GO:0009846: pollen germination	4.23E-02
149	GO:0042538: hyperosmotic salinity response	4.23E-02
150	GO:0048364: root development	4.44E-02
151	GO:0051603: proteolysis involved in cellular protein catabolic process	4.56E-02
152	GO:0008152: metabolic process	4.69E-02
153	GO:0006417: regulation of translation	4.78E-02
154	GO:0016310: phosphorylation	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0047412: N-(long-chain-acyl)ethanolamine deacylase activity	0.00E+00
2	GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity	0.00E+00
3	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
4	GO:0046424: ferulate 5-hydroxylase activity	0.00E+00
5	GO:0017113: dihydropyrimidine dehydrogenase (NADP+) activity	0.00E+00
6	GO:0009940: amino-terminal vacuolar sorting propeptide binding	0.00E+00
7	GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives	0.00E+00
8	GO:0103073: anandamide amidohydrolase activity	0.00E+00
9	GO:0102077: oleamide hydrolase activity	0.00E+00
10	GO:0005524: ATP binding	5.30E-08
11	GO:0016301: kinase activity	1.05E-06
12	GO:0004674: protein serine/threonine kinase activity	1.73E-05
13	GO:0102391: decanoate--CoA ligase activity	7.14E-05
14	GO:0004747: ribokinase activity	7.14E-05
15	GO:0004467: long-chain fatty acid-CoA ligase activity	9.52E-05
16	GO:0008865: fructokinase activity	1.23E-04
17	GO:0008142: oxysterol binding	1.53E-04
18	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	1.64E-04
19	GO:0004815: aspartate-tRNA ligase activity	1.64E-04
20	GO:0015208: guanine transmembrane transporter activity	1.64E-04
21	GO:0015294: solute:cation symporter activity	1.64E-04
22	GO:0010209: vacuolar sorting signal binding	1.64E-04
23	GO:0015207: adenine transmembrane transporter activity	1.64E-04
24	GO:0030955: potassium ion binding	2.25E-04
25	GO:0004743: pyruvate kinase activity	2.25E-04
26	GO:0003958: NADPH-hemoprotein reductase activity	3.73E-04
27	GO:0004750: ribulose-phosphate 3-epimerase activity	3.73E-04
28	GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	3.73E-04
29	GO:0004142: diacylglycerol cholinephosphotransferase activity	3.73E-04
30	GO:0003988: acetyl-CoA C-acyltransferase activity	3.73E-04
31	GO:0004061: arylformamidase activity	3.73E-04
32	GO:0005516: calmodulin binding	5.18E-04
33	GO:0004383: guanylate cyclase activity	6.11E-04
34	GO:0004781: sulfate adenylyltransferase (ATP) activity	6.11E-04
35	GO:0016805: dipeptidase activity	6.11E-04
36	GO:0005093: Rab GDP-dissociation inhibitor activity	6.11E-04
37	GO:0005047: signal recognition particle binding	6.11E-04
38	GO:0004300: enoyl-CoA hydratase activity	8.73E-04
39	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	8.73E-04
40	GO:0001653: peptide receptor activity	8.73E-04
41	GO:0050660: flavin adenine dinucleotide binding	9.57E-04
42	GO:0061630: ubiquitin protein ligase activity	1.14E-03
43	GO:0015210: uracil transmembrane transporter activity	1.16E-03
44	GO:0003995: acyl-CoA dehydrogenase activity	1.16E-03
45	GO:0005471: ATP:ADP antiporter activity	1.47E-03
46	GO:0004040: amidase activity	1.47E-03
47	GO:0036402: proteasome-activating ATPase activity	1.80E-03
48	GO:0048040: UDP-glucuronate decarboxylase activity	1.80E-03
49	GO:0004672: protein kinase activity	1.99E-03
50	GO:0004124: cysteine synthase activity	2.17E-03
51	GO:0070403: NAD+ binding	2.17E-03
52	GO:0008195: phosphatidate phosphatase activity	2.17E-03
53	GO:0051753: mannan synthase activity	2.17E-03
54	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.39E-03
55	GO:0004683: calmodulin-dependent protein kinase activity	2.52E-03
56	GO:0008235: metalloexopeptidase activity	2.55E-03
57	GO:0102425: myricetin 3-O-glucosyltransferase activity	2.55E-03
58	GO:0102360: daphnetin 3-O-glucosyltransferase activity	2.55E-03
59	GO:0015288: porin activity	2.95E-03
60	GO:0047893: flavonol 3-O-glucosyltransferase activity	2.95E-03
61	GO:0005509: calcium ion binding	3.11E-03
62	GO:0005267: potassium channel activity	3.37E-03
63	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.81E-03
64	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	3.81E-03
65	GO:0047617: acyl-CoA hydrolase activity	4.27E-03
66	GO:0004177: aminopeptidase activity	5.25E-03
67	GO:0005388: calcium-transporting ATPase activity	6.30E-03
68	GO:0015266: protein channel activity	6.30E-03
69	GO:0031624: ubiquitin conjugating enzyme binding	6.85E-03
70	GO:0004175: endopeptidase activity	6.85E-03
71	GO:0017025: TBP-class protein binding	7.41E-03
72	GO:0004725: protein tyrosine phosphatase activity	8.00E-03
73	GO:0043130: ubiquitin binding	8.59E-03
74	GO:0019706: protein-cysteine S-palmitoyltransferase activity	9.84E-03
75	GO:0008408: 3'-5' exonuclease activity	9.84E-03
76	GO:0035251: UDP-glucosyltransferase activity	9.84E-03
77	GO:0016760: cellulose synthase (UDP-forming) activity	1.11E-02
78	GO:0003727: single-stranded RNA binding	1.18E-02
79	GO:0030170: pyridoxal phosphate binding	1.21E-02
80	GO:0047134: protein-disulfide reductase activity	1.25E-02
81	GO:0030276: clathrin binding	1.39E-02
82	GO:0008289: lipid binding	1.41E-02
83	GO:0004791: thioredoxin-disulfide reductase activity	1.47E-02
84	GO:0010181: FMN binding	1.47E-02
85	GO:0004872: receptor activity	1.54E-02
86	GO:0016759: cellulose synthase activity	1.86E-02
87	GO:0016491: oxidoreductase activity	2.01E-02
88	GO:0016413: O-acetyltransferase activity	2.02E-02
89	GO:0004842: ubiquitin-protein transferase activity	2.16E-02
90	GO:0000287: magnesium ion binding	2.29E-02
91	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.45E-02
92	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.54E-02
93	GO:0005096: GTPase activator activity	2.63E-02
94	GO:0004222: metalloendopeptidase activity	2.72E-02
95	GO:0030145: manganese ion binding	2.82E-02
96	GO:0000149: SNARE binding	3.20E-02
97	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.20E-02
98	GO:0050661: NADP binding	3.30E-02
99	GO:0005484: SNAP receptor activity	3.60E-02
100	GO:0035091: phosphatidylinositol binding	3.81E-02
101	GO:0003924: GTPase activity	4.26E-02
102	GO:0009055: electron carrier activity	4.56E-02
103	GO:0031625: ubiquitin protein ligase binding	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0071561: nucleus-vacuole junction	0.00E+00
3	GO:0005886: plasma membrane	5.64E-05
4	GO:0005770: late endosome	8.78E-05
5	GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I	1.64E-04
6	GO:0045334: clathrin-coated endocytic vesicle	1.64E-04
7	GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II	1.64E-04
8	GO:0005829: cytosol	1.90E-04
9	GO:0045254: pyruvate dehydrogenase complex	3.73E-04
10	GO:0005783: endoplasmic reticulum	8.08E-04
11	GO:0005773: vacuole	1.11E-03
12	GO:0009527: plastid outer membrane	1.16E-03
13	GO:0031372: UBC13-MMS2 complex	1.16E-03
14	GO:0005777: peroxisome	1.32E-03
15	GO:0072686: mitotic spindle	1.47E-03
16	GO:0000776: kinetochore	1.47E-03
17	GO:0030140: trans-Golgi network transport vesicle	1.80E-03
18	GO:0005778: peroxisomal membrane	1.91E-03
19	GO:0031597: cytosolic proteasome complex	2.17E-03
20	GO:0030173: integral component of Golgi membrane	2.17E-03
21	GO:0005759: mitochondrial matrix	2.20E-03
22	GO:0031595: nuclear proteasome complex	2.55E-03
23	GO:0000151: ubiquitin ligase complex	2.78E-03
24	GO:0012507: ER to Golgi transport vesicle membrane	2.95E-03
25	GO:0046930: pore complex	3.37E-03
26	GO:0009514: glyoxysome	3.37E-03
27	GO:0034045: pre-autophagosomal structure membrane	3.37E-03
28	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	3.37E-03
29	GO:0031902: late endosome membrane	4.18E-03
30	GO:0030665: clathrin-coated vesicle membrane	4.27E-03
31	GO:0008540: proteasome regulatory particle, base subcomplex	4.27E-03
32	GO:0017119: Golgi transport complex	4.75E-03
33	GO:0030125: clathrin vesicle coat	4.75E-03
34	GO:0000502: proteasome complex	6.10E-03
35	GO:0005737: cytoplasm	6.75E-03
36	GO:0030176: integral component of endoplasmic reticulum membrane	7.41E-03
37	GO:0005802: trans-Golgi network	9.33E-03
38	GO:0005741: mitochondrial outer membrane	9.84E-03
39	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.18E-02
40	GO:0009504: cell plate	1.54E-02
41	GO:0032580: Golgi cisterna membrane	1.86E-02
42	GO:0009707: chloroplast outer membrane	2.54E-02
43	GO:0005643: nuclear pore	2.54E-02
44	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.56E-02
45	GO:0000325: plant-type vacuole	2.82E-02
46	GO:0005774: vacuolar membrane	3.04E-02
47	GO:0031201: SNARE complex	3.40E-02
48	GO:0016021: integral component of membrane	4.39E-02
49	GO:0005635: nuclear envelope	4.67E-02
50	GO:0043231: intracellular membrane-bounded organelle	4.69E-02