co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G34450

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070478: nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay	0.00E+00
2	GO:0007160: cell-matrix adhesion	0.00E+00
3	GO:0006903: vesicle targeting	0.00E+00
4	GO:0010636: positive regulation of mitochondrial fusion	0.00E+00
5	GO:0048312: intracellular distribution of mitochondria	0.00E+00
6	GO:0032264: IMP salvage	0.00E+00
7	GO:0034620: cellular response to unfolded protein	1.04E-05
8	GO:0009168: purine ribonucleoside monophosphate biosynthetic process	1.04E-05
9	GO:0006422: aspartyl-tRNA aminoacylation	1.04E-05
10	GO:0042325: regulation of phosphorylation	2.78E-05
11	GO:0060149: negative regulation of posttranscriptional gene silencing	2.78E-05
12	GO:0006612: protein targeting to membrane	7.70E-05
13	GO:0006893: Golgi to plasma membrane transport	7.70E-05
14	GO:2000114: regulation of establishment of cell polarity	7.70E-05
15	GO:0043207: response to external biotic stimulus	7.70E-05
16	GO:0072583: clathrin-dependent endocytosis	7.70E-05
17	GO:0033320: UDP-D-xylose biosynthetic process	1.07E-04
18	GO:0000380: alternative mRNA splicing, via spliceosome	1.40E-04
19	GO:0016070: RNA metabolic process	1.74E-04
20	GO:0042732: D-xylose metabolic process	1.74E-04
21	GO:0048766: root hair initiation	2.90E-04
22	GO:0010093: specification of floral organ identity	3.32E-04
23	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	3.32E-04
24	GO:0060321: acceptance of pollen	3.32E-04
25	GO:0048589: developmental growth	3.74E-04
26	GO:0010018: far-red light signaling pathway	4.18E-04
27	GO:0048354: mucilage biosynthetic process involved in seed coat development	4.18E-04
28	GO:0000266: mitochondrial fission	5.55E-04
29	GO:0034605: cellular response to heat	6.53E-04
30	GO:0009225: nucleotide-sugar metabolic process	7.02E-04
31	GO:0042753: positive regulation of circadian rhythm	7.53E-04
32	GO:0016226: iron-sulfur cluster assembly	9.65E-04
33	GO:0070417: cellular response to cold	1.13E-03
34	GO:0008360: regulation of cell shape	1.25E-03
35	GO:0006397: mRNA processing	1.30E-03
36	GO:0009556: microsporogenesis	1.37E-03
37	GO:0009639: response to red or far red light	1.63E-03
38	GO:0006904: vesicle docking involved in exocytosis	1.70E-03
39	GO:0006887: exocytosis	2.88E-03
40	GO:0009846: pollen germination	3.54E-03
41	GO:0009585: red, far-red light phototransduction	3.72E-03
42	GO:0006096: glycolytic process	4.17E-03
43	GO:0000398: mRNA splicing, via spliceosome	5.22E-03
44	GO:0046686: response to cadmium ion	6.78E-03
45	GO:0009737: response to abscisic acid	9.27E-03
46	GO:0009860: pollen tube growth	9.84E-03
47	GO:0006886: intracellular protein transport	1.26E-02
48	GO:0008152: metabolic process	1.53E-02
49	GO:0009555: pollen development	2.15E-02
50	GO:0045893: positive regulation of transcription, DNA-templated	2.37E-02
51	GO:0006457: protein folding	2.59E-02
52	GO:0071555: cell wall organization	3.56E-02
53	GO:0015031: protein transport	4.22E-02

Rank	GO Term	Adjusted P value
1	GO:0003876: AMP deaminase activity	0.00E+00
2	GO:0030623: U5 snRNA binding	1.04E-05
3	GO:0004815: aspartate-tRNA ligase activity	1.04E-05
4	GO:0030276: clathrin binding	2.93E-05
5	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	7.70E-05
6	GO:0017070: U6 snRNA binding	1.40E-04
7	GO:0048040: UDP-glucuronate decarboxylase activity	1.74E-04
8	GO:0070403: NAD+ binding	2.11E-04
9	GO:0008143: poly(A) binding	2.50E-04
10	GO:0003843: 1,3-beta-D-glucan synthase activity	3.32E-04
11	GO:0003724: RNA helicase activity	3.32E-04
12	GO:0019888: protein phosphatase regulator activity	6.04E-04
13	GO:0009982: pseudouridine synthase activity	6.04E-04
14	GO:0051536: iron-sulfur cluster binding	8.05E-04
15	GO:0051087: chaperone binding	8.59E-04
16	GO:0043424: protein histidine kinase binding	8.59E-04
17	GO:0004004: ATP-dependent RNA helicase activity	2.04E-03
18	GO:0051539: 4 iron, 4 sulfur cluster binding	2.80E-03
19	GO:0005198: structural molecule activity	3.29E-03
20	GO:0005524: ATP binding	3.87E-03
21	GO:0016746: transferase activity, transferring acyl groups	4.82E-03
22	GO:0008026: ATP-dependent helicase activity	4.92E-03
23	GO:0003729: mRNA binding	6.47E-03
24	GO:0003723: RNA binding	6.71E-03
25	GO:0008017: microtubule binding	7.11E-03
26	GO:0042803: protein homodimerization activity	1.27E-02
27	GO:0003924: GTPase activity	1.43E-02
28	GO:0000166: nucleotide binding	2.15E-02
29	GO:0005516: calmodulin binding	2.88E-02
30	GO:0005525: GTP binding	3.07E-02
31	GO:0003824: catalytic activity	3.80E-02
32	GO:0004672: protein kinase activity	4.68E-02
33	GO:0046872: metal ion binding	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0008305: integrin complex	0.00E+00
2	GO:0055087: Ski complex	0.00E+00
3	GO:0005829: cytosol	1.03E-07
4	GO:0009506: plasmodesma	8.14E-06
5	GO:0045334: clathrin-coated endocytic vesicle	1.04E-05
6	GO:0045254: pyruvate dehydrogenase complex	2.78E-05
7	GO:0005783: endoplasmic reticulum	1.62E-04
8	GO:0000148: 1,3-beta-D-glucan synthase complex	3.32E-04
9	GO:0010494: cytoplasmic stress granule	3.74E-04
10	GO:0031307: integral component of mitochondrial outer membrane	5.55E-04
11	GO:0009504: cell plate	1.37E-03
12	GO:0000145: exocyst	1.50E-03
13	GO:0005886: plasma membrane	1.56E-03
14	GO:0032580: Golgi cisterna membrane	1.63E-03
15	GO:0005774: vacuolar membrane	2.40E-03
16	GO:0005856: cytoskeleton	3.29E-03
17	GO:0005681: spliceosomal complex	4.17E-03
18	GO:0016607: nuclear speck	4.26E-03
19	GO:0005794: Golgi apparatus	4.33E-03
20	GO:0005654: nucleoplasm	5.42E-03
21	GO:0009524: phragmoplast	5.72E-03
22	GO:0005759: mitochondrial matrix	6.46E-03
23	GO:0046658: anchored component of plasma membrane	8.38E-03
24	GO:0005874: microtubule	1.06E-02
25	GO:0043231: intracellular membrane-bounded organelle	1.53E-02
26	GO:0005618: cell wall	1.73E-02
27	GO:0005773: vacuole	2.32E-02
28	GO:0005802: trans-Golgi network	3.01E-02
29	GO:0005768: endosome	3.30E-02
30	GO:0000139: Golgi membrane	4.42E-02