co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G34230

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
2	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
3	GO:0006592: ornithine biosynthetic process	0.00E+00
4	GO:0006593: ornithine catabolic process	0.00E+00
5	GO:0006482: protein demethylation	0.00E+00
6	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
7	GO:0006105: succinate metabolic process	0.00E+00
8	GO:0046109: uridine biosynthetic process	0.00E+00
9	GO:0019484: beta-alanine catabolic process	0.00E+00
10	GO:0006983: ER overload response	0.00E+00
11	GO:0033587: shikimate biosynthetic process	0.00E+00
12	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
13	GO:1900425: negative regulation of defense response to bacterium	5.65E-05
14	GO:0098721: uracil import across plasma membrane	1.75E-04
15	GO:0098702: adenine import across plasma membrane	1.75E-04
16	GO:0035266: meristem growth	1.75E-04
17	GO:0098710: guanine import across plasma membrane	1.75E-04
18	GO:0009450: gamma-aminobutyric acid catabolic process	1.75E-04
19	GO:0007292: female gamete generation	1.75E-04
20	GO:0060627: regulation of vesicle-mediated transport	1.75E-04
21	GO:0015760: glucose-6-phosphate transport	1.75E-04
22	GO:0010184: cytokinin transport	1.75E-04
23	GO:0035344: hypoxanthine transport	1.75E-04
24	GO:0009865: pollen tube adhesion	1.75E-04
25	GO:0006540: glutamate decarboxylation to succinate	1.75E-04
26	GO:0019544: arginine catabolic process to glutamate	1.75E-04
27	GO:0043069: negative regulation of programmed cell death	2.90E-04
28	GO:0019441: tryptophan catabolic process to kynurenine	3.96E-04
29	GO:0010033: response to organic substance	3.96E-04
30	GO:0009915: phloem sucrose loading	3.96E-04
31	GO:0019374: galactolipid metabolic process	3.96E-04
32	GO:0051788: response to misfolded protein	3.96E-04
33	GO:0043066: negative regulation of apoptotic process	3.96E-04
34	GO:0015865: purine nucleotide transport	3.96E-04
35	GO:0015712: hexose phosphate transport	3.96E-04
36	GO:0052542: defense response by callose deposition	3.96E-04
37	GO:0080026: response to indolebutyric acid	3.96E-04
38	GO:0006631: fatty acid metabolic process	5.59E-04
39	GO:0051707: response to other organism	6.19E-04
40	GO:0010476: gibberellin mediated signaling pathway	6.47E-04
41	GO:0010325: raffinose family oligosaccharide biosynthetic process	6.47E-04
42	GO:0060968: regulation of gene silencing	6.47E-04
43	GO:0015714: phosphoenolpyruvate transport	6.47E-04
44	GO:1900055: regulation of leaf senescence	6.47E-04
45	GO:0051646: mitochondrion localization	6.47E-04
46	GO:0010359: regulation of anion channel activity	6.47E-04
47	GO:0061158: 3'-UTR-mediated mRNA destabilization	6.47E-04
48	GO:0035436: triose phosphate transmembrane transport	6.47E-04
49	GO:0080024: indolebutyric acid metabolic process	9.23E-04
50	GO:0001676: long-chain fatty acid metabolic process	9.23E-04
51	GO:0006624: vacuolar protein processing	9.23E-04
52	GO:0006020: inositol metabolic process	9.23E-04
53	GO:2001289: lipid X metabolic process	9.23E-04
54	GO:0070301: cellular response to hydrogen peroxide	9.23E-04
55	GO:0046902: regulation of mitochondrial membrane permeability	9.23E-04
56	GO:0009052: pentose-phosphate shunt, non-oxidative branch	9.23E-04
57	GO:0071786: endoplasmic reticulum tubular network organization	9.23E-04
58	GO:0006012: galactose metabolic process	9.77E-04
59	GO:0006508: proteolysis	1.08E-03
60	GO:0006096: glycolytic process	1.10E-03
61	GO:0009626: plant-type hypersensitive response	1.19E-03
62	GO:0010109: regulation of photosynthesis	1.22E-03
63	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.22E-03
64	GO:0006536: glutamate metabolic process	1.22E-03
65	GO:0015713: phosphoglycerate transport	1.22E-03
66	GO:0009651: response to salt stress	1.33E-03
67	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.91E-03
68	GO:0006561: proline biosynthetic process	1.91E-03
69	GO:0048827: phyllome development	1.91E-03
70	GO:0048232: male gamete generation	1.91E-03
71	GO:0043248: proteasome assembly	1.91E-03
72	GO:0010358: leaf shaping	1.91E-03
73	GO:1902456: regulation of stomatal opening	1.91E-03
74	GO:0010337: regulation of salicylic acid metabolic process	1.91E-03
75	GO:0035435: phosphate ion transmembrane transport	1.91E-03
76	GO:0009643: photosynthetic acclimation	1.91E-03
77	GO:0009845: seed germination	2.04E-03
78	GO:0006904: vesicle docking involved in exocytosis	2.09E-03
79	GO:0016042: lipid catabolic process	2.09E-03
80	GO:0010189: vitamin E biosynthetic process	2.30E-03
81	GO:0048444: floral organ morphogenesis	2.30E-03
82	GO:0009094: L-phenylalanine biosynthetic process	2.30E-03
83	GO:0048280: vesicle fusion with Golgi apparatus	2.30E-03
84	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	2.30E-03
85	GO:0048364: root development	2.33E-03
86	GO:0046686: response to cadmium ion	2.67E-03
87	GO:0050790: regulation of catalytic activity	2.70E-03
88	GO:0006955: immune response	2.70E-03
89	GO:0046470: phosphatidylcholine metabolic process	2.70E-03
90	GO:0009395: phospholipid catabolic process	2.70E-03
91	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	2.70E-03
92	GO:0050829: defense response to Gram-negative bacterium	2.70E-03
93	GO:0010150: leaf senescence	2.77E-03
94	GO:0006644: phospholipid metabolic process	3.13E-03
95	GO:0009819: drought recovery	3.13E-03
96	GO:1900150: regulation of defense response to fungus	3.13E-03
97	GO:0019375: galactolipid biosynthetic process	3.13E-03
98	GO:0010078: maintenance of root meristem identity	3.13E-03
99	GO:0048767: root hair elongation	3.19E-03
100	GO:0010119: regulation of stomatal movement	3.51E-03
101	GO:0006972: hyperosmotic response	3.58E-03
102	GO:0006002: fructose 6-phosphate metabolic process	3.58E-03
103	GO:0006526: arginine biosynthetic process	3.58E-03
104	GO:0009056: catabolic process	4.05E-03
105	GO:0009821: alkaloid biosynthetic process	4.05E-03
106	GO:0006098: pentose-phosphate shunt	4.05E-03
107	GO:0090333: regulation of stomatal closure	4.05E-03
108	GO:0008202: steroid metabolic process	4.54E-03
109	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.54E-03
110	GO:0006887: exocytosis	4.56E-03
111	GO:0009744: response to sucrose	4.95E-03
112	GO:0048829: root cap development	5.05E-03
113	GO:0006896: Golgi to vacuole transport	5.05E-03
114	GO:0006995: cellular response to nitrogen starvation	5.05E-03
115	GO:0010015: root morphogenesis	5.58E-03
116	GO:0000038: very long-chain fatty acid metabolic process	5.58E-03
117	GO:0043085: positive regulation of catalytic activity	5.58E-03
118	GO:0006855: drug transmembrane transport	5.77E-03
119	GO:0080167: response to karrikin	6.34E-03
120	GO:0009809: lignin biosynthetic process	6.66E-03
121	GO:0006813: potassium ion transport	6.66E-03
122	GO:0018107: peptidyl-threonine phosphorylation	6.70E-03
123	GO:0009725: response to hormone	6.70E-03
124	GO:0051603: proteolysis involved in cellular protein catabolic process	6.90E-03
125	GO:0046777: protein autophosphorylation	6.91E-03
126	GO:0009266: response to temperature stimulus	7.28E-03
127	GO:0006541: glutamine metabolic process	7.28E-03
128	GO:0009933: meristem structural organization	7.28E-03
129	GO:0090351: seedling development	7.89E-03
130	GO:0010053: root epidermal cell differentiation	7.89E-03
131	GO:0005985: sucrose metabolic process	7.89E-03
132	GO:0048367: shoot system development	8.14E-03
133	GO:0006863: purine nucleobase transport	8.51E-03
134	GO:0006636: unsaturated fatty acid biosynthetic process	8.51E-03
135	GO:0009620: response to fungus	8.66E-03
136	GO:2000377: regulation of reactive oxygen species metabolic process	9.15E-03
137	GO:0030150: protein import into mitochondrial matrix	9.15E-03
138	GO:0007010: cytoskeleton organization	9.15E-03
139	GO:0018105: peptidyl-serine phosphorylation	9.78E-03
140	GO:0006629: lipid metabolic process	1.04E-02
141	GO:0031408: oxylipin biosynthetic process	1.05E-02
142	GO:0035428: hexose transmembrane transport	1.12E-02
143	GO:0030433: ubiquitin-dependent ERAD pathway	1.12E-02
144	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.33E-02
145	GO:0042147: retrograde transport, endosome to Golgi	1.33E-02
146	GO:0046323: glucose import	1.49E-02
147	GO:0010154: fruit development	1.49E-02
148	GO:0042742: defense response to bacterium	1.52E-02
149	GO:0006814: sodium ion transport	1.56E-02
150	GO:0040008: regulation of growth	1.57E-02
151	GO:0006623: protein targeting to vacuole	1.64E-02
152	GO:0010183: pollen tube guidance	1.64E-02
153	GO:0009749: response to glucose	1.64E-02
154	GO:0006635: fatty acid beta-oxidation	1.72E-02
155	GO:0002229: defense response to oomycetes	1.72E-02
156	GO:0000302: response to reactive oxygen species	1.72E-02
157	GO:0006891: intra-Golgi vesicle-mediated transport	1.72E-02
158	GO:0010193: response to ozone	1.72E-02
159	GO:0009630: gravitropism	1.81E-02
160	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.84E-02
161	GO:0030163: protein catabolic process	1.89E-02
162	GO:0071805: potassium ion transmembrane transport	2.06E-02
163	GO:0009738: abscisic acid-activated signaling pathway	2.07E-02
164	GO:0051607: defense response to virus	2.15E-02
165	GO:0009615: response to virus	2.24E-02
166	GO:0010029: regulation of seed germination	2.33E-02
167	GO:0009816: defense response to bacterium, incompatible interaction	2.33E-02
168	GO:0006888: ER to Golgi vesicle-mediated transport	2.52E-02
169	GO:0008219: cell death	2.71E-02
170	GO:0030244: cellulose biosynthetic process	2.71E-02
171	GO:0010311: lateral root formation	2.80E-02
172	GO:0006499: N-terminal protein myristoylation	2.90E-02
173	GO:0055085: transmembrane transport	2.90E-02
174	GO:0009723: response to ethylene	2.95E-02
175	GO:0045087: innate immune response	3.20E-02
176	GO:0016051: carbohydrate biosynthetic process	3.20E-02
177	GO:0010200: response to chitin	3.27E-02
178	GO:0006839: mitochondrial transport	3.52E-02
179	GO:0042542: response to hydrogen peroxide	3.73E-02
180	GO:0010114: response to red light	3.84E-02
181	GO:0009965: leaf morphogenesis	4.17E-02
182	GO:0031347: regulation of defense response	4.39E-02
183	GO:0042538: hyperosmotic salinity response	4.51E-02
184	GO:0006812: cation transport	4.51E-02
185	GO:0009751: response to salicylic acid	4.58E-02
186	GO:0010224: response to UV-B	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0008777: acetylornithine deacetylase activity	0.00E+00
2	GO:0015211: purine nucleoside transmembrane transporter activity	0.00E+00
3	GO:0016504: peptidase activator activity	0.00E+00
4	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
5	GO:0070577: lysine-acetylated histone binding	0.00E+00
6	GO:0019211: phosphatase activator activity	0.00E+00
7	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
8	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
9	GO:0051723: protein methylesterase activity	0.00E+00
10	GO:0004620: phospholipase activity	1.05E-04
11	GO:0004630: phospholipase D activity	1.69E-04
12	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.69E-04
13	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	1.75E-04
14	GO:0015208: guanine transmembrane transporter activity	1.75E-04
15	GO:0015294: solute:cation symporter activity	1.75E-04
16	GO:0003867: 4-aminobutyrate transaminase activity	1.75E-04
17	GO:0015207: adenine transmembrane transporter activity	1.75E-04
18	GO:0019707: protein-cysteine S-acyltransferase activity	1.75E-04
19	GO:0030955: potassium ion binding	2.46E-04
20	GO:0004743: pyruvate kinase activity	2.46E-04
21	GO:0010331: gibberellin binding	3.96E-04
22	GO:0047216: inositol 3-alpha-galactosyltransferase activity	3.96E-04
23	GO:0015152: glucose-6-phosphate transmembrane transporter activity	3.96E-04
24	GO:0004061: arylformamidase activity	3.96E-04
25	GO:0015036: disulfide oxidoreductase activity	3.96E-04
26	GO:0015297: antiporter activity	4.21E-04
27	GO:0005315: inorganic phosphate transmembrane transporter activity	4.39E-04
28	GO:0016805: dipeptidase activity	6.47E-04
29	GO:0071917: triose-phosphate transmembrane transporter activity	6.47E-04
30	GO:0004751: ribose-5-phosphate isomerase activity	6.47E-04
31	GO:0000287: magnesium ion binding	8.55E-04
32	GO:0004300: enoyl-CoA hydratase activity	9.23E-04
33	GO:0005432: calcium:sodium antiporter activity	9.23E-04
34	GO:0015120: phosphoglycerate transmembrane transporter activity	1.22E-03
35	GO:0004659: prenyltransferase activity	1.22E-03
36	GO:0047769: arogenate dehydratase activity	1.22E-03
37	GO:0004737: pyruvate decarboxylase activity	1.22E-03
38	GO:0004664: prephenate dehydratase activity	1.22E-03
39	GO:0015210: uracil transmembrane transporter activity	1.22E-03
40	GO:0070628: proteasome binding	1.22E-03
41	GO:0009916: alternative oxidase activity	1.22E-03
42	GO:0004872: receptor activity	1.52E-03
43	GO:0005471: ATP:ADP antiporter activity	1.56E-03
44	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.56E-03
45	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.56E-03
46	GO:0005496: steroid binding	1.56E-03
47	GO:0004197: cysteine-type endopeptidase activity	1.73E-03
48	GO:0030976: thiamine pyrophosphate binding	1.91E-03
49	GO:0036402: proteasome-activating ATPase activity	1.91E-03
50	GO:0004012: phospholipid-translocating ATPase activity	2.30E-03
51	GO:0003978: UDP-glucose 4-epimerase activity	2.30E-03
52	GO:0016831: carboxy-lyase activity	2.70E-03
53	GO:0008235: metalloexopeptidase activity	2.70E-03
54	GO:0102425: myricetin 3-O-glucosyltransferase activity	2.70E-03
55	GO:0102360: daphnetin 3-O-glucosyltransferase activity	2.70E-03
56	GO:0008121: ubiquinol-cytochrome-c reductase activity	2.70E-03
57	GO:0003872: 6-phosphofructokinase activity	2.70E-03
58	GO:0047893: flavonol 3-O-glucosyltransferase activity	3.13E-03
59	GO:0052747: sinapyl alcohol dehydrogenase activity	3.13E-03
60	GO:0015491: cation:cation antiporter activity	3.13E-03
61	GO:0015238: drug transmembrane transporter activity	3.19E-03
62	GO:0004674: protein serine/threonine kinase activity	3.33E-03
63	GO:0008142: oxysterol binding	3.58E-03
64	GO:0047617: acyl-CoA hydrolase activity	4.54E-03
65	GO:0016844: strictosidine synthase activity	4.54E-03
66	GO:0016301: kinase activity	4.87E-03
67	GO:0004177: aminopeptidase activity	5.58E-03
68	GO:0045551: cinnamyl-alcohol dehydrogenase activity	6.13E-03
69	GO:0015266: protein channel activity	6.70E-03
70	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	6.70E-03
71	GO:0004175: endopeptidase activity	7.28E-03
72	GO:0008234: cysteine-type peptidase activity	7.38E-03
73	GO:0004190: aspartic-type endopeptidase activity	7.89E-03
74	GO:0017025: TBP-class protein binding	7.89E-03
75	GO:0003954: NADH dehydrogenase activity	9.15E-03
76	GO:0005516: calmodulin binding	9.72E-03
77	GO:0005345: purine nucleobase transmembrane transporter activity	9.80E-03
78	GO:0015079: potassium ion transmembrane transporter activity	9.80E-03
79	GO:0043565: sequence-specific DNA binding	1.01E-02
80	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.05E-02
81	GO:0035251: UDP-glucosyltransferase activity	1.05E-02
82	GO:0016758: transferase activity, transferring hexosyl groups	1.16E-02
83	GO:0003727: single-stranded RNA binding	1.26E-02
84	GO:0030170: pyridoxal phosphate binding	1.32E-02
85	GO:0005355: glucose transmembrane transporter activity	1.56E-02
86	GO:0016787: hydrolase activity	1.57E-02
87	GO:0048038: quinone binding	1.72E-02
88	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.72E-02
89	GO:0005215: transporter activity	1.77E-02
90	GO:0008237: metallopeptidase activity	2.06E-02
91	GO:0005200: structural constituent of cytoskeleton	2.06E-02
92	GO:0016597: amino acid binding	2.15E-02
93	GO:0051213: dioxygenase activity	2.24E-02
94	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.42E-02
95	GO:0004683: calmodulin-dependent protein kinase activity	2.52E-02
96	GO:0004806: triglyceride lipase activity	2.52E-02
97	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.71E-02
98	GO:0005096: GTPase activator activity	2.80E-02
99	GO:0004222: metalloendopeptidase activity	2.90E-02
100	GO:0030145: manganese ion binding	3.00E-02
101	GO:0050897: cobalt ion binding	3.00E-02
102	GO:0000149: SNARE binding	3.41E-02
103	GO:0051539: 4 iron, 4 sulfur cluster binding	3.52E-02
104	GO:0005524: ATP binding	3.65E-02
105	GO:0005484: SNAP receptor activity	3.84E-02
106	GO:0035091: phosphatidylinositol binding	4.06E-02
107	GO:0005509: calcium ion binding	4.67E-02
108	GO:0016298: lipase activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0005829: cytosol	4.64E-05
2	GO:0005773: vacuole	1.46E-04
3	GO:0000138: Golgi trans cisterna	1.75E-04
4	GO:0031304: intrinsic component of mitochondrial inner membrane	3.96E-04
5	GO:0031314: extrinsic component of mitochondrial inner membrane	3.96E-04
6	GO:0031902: late endosome membrane	5.59E-04
7	GO:0005789: endoplasmic reticulum membrane	7.32E-04
8	GO:0070062: extracellular exosome	9.23E-04
9	GO:0000323: lytic vacuole	9.23E-04
10	GO:0071782: endoplasmic reticulum tubular network	9.23E-04
11	GO:0005777: peroxisome	1.55E-03
12	GO:0005945: 6-phosphofructokinase complex	1.56E-03
13	GO:0000145: exocyst	1.73E-03
14	GO:0030140: trans-Golgi network transport vesicle	1.91E-03
15	GO:0031597: cytosolic proteasome complex	2.30E-03
16	GO:0031595: nuclear proteasome complex	2.70E-03
17	GO:0031305: integral component of mitochondrial inner membrane	3.13E-03
18	GO:0012507: ER to Golgi transport vesicle membrane	3.13E-03
19	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	3.13E-03
20	GO:0016021: integral component of membrane	3.97E-03
21	GO:0008540: proteasome regulatory particle, base subcomplex	4.54E-03
22	GO:0005886: plasma membrane	5.20E-03
23	GO:0005764: lysosome	7.28E-03
24	GO:0005750: mitochondrial respiratory chain complex III	7.28E-03
25	GO:0005783: endoplasmic reticulum	7.56E-03
26	GO:0016020: membrane	8.42E-03
27	GO:0005769: early endosome	8.51E-03
28	GO:0005743: mitochondrial inner membrane	9.49E-03
29	GO:0070469: respiratory chain	9.80E-03
30	GO:0005839: proteasome core complex	1.05E-02
31	GO:0005802: trans-Golgi network	1.07E-02
32	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.26E-02
33	GO:0005774: vacuolar membrane	1.27E-02
34	GO:0030136: clathrin-coated vesicle	1.33E-02
35	GO:0005794: Golgi apparatus	1.33E-02
36	GO:0005770: late endosome	1.49E-02
37	GO:0071944: cell periphery	1.89E-02
38	GO:0000325: plant-type vacuole	3.00E-02
39	GO:0031969: chloroplast membrane	3.16E-02
40	GO:0031201: SNARE complex	3.62E-02
41	GO:0005856: cytoskeleton	4.17E-02
42	GO:0031966: mitochondrial membrane	4.51E-02
43	GO:0000502: proteasome complex	4.74E-02
44	GO:0005635: nuclear envelope	4.97E-02