co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G34120

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019484: beta-alanine catabolic process	0.00E+00
2	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
3	GO:0010730: negative regulation of hydrogen peroxide biosynthetic process	0.00E+00
4	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
5	GO:0006592: ornithine biosynthetic process	0.00E+00
6	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
7	GO:0006105: succinate metabolic process	0.00E+00
8	GO:0000390: spliceosomal complex disassembly	0.00E+00
9	GO:0009415: response to water	9.51E-05
10	GO:0035344: hypoxanthine transport	1.40E-04
11	GO:0071366: cellular response to indolebutyric acid stimulus	1.40E-04
12	GO:0009865: pollen tube adhesion	1.40E-04
13	GO:0006540: glutamate decarboxylation to succinate	1.40E-04
14	GO:0098721: uracil import across plasma membrane	1.40E-04
15	GO:0006144: purine nucleobase metabolic process	1.40E-04
16	GO:0098702: adenine import across plasma membrane	1.40E-04
17	GO:0046167: glycerol-3-phosphate biosynthetic process	1.40E-04
18	GO:0035266: meristem growth	1.40E-04
19	GO:0098710: guanine import across plasma membrane	1.40E-04
20	GO:0009450: gamma-aminobutyric acid catabolic process	1.40E-04
21	GO:0007292: female gamete generation	1.40E-04
22	GO:0019628: urate catabolic process	1.40E-04
23	GO:0000303: response to superoxide	1.40E-04
24	GO:0010184: cytokinin transport	1.40E-04
25	GO:0048829: root cap development	2.09E-04
26	GO:0051788: response to misfolded protein	3.20E-04
27	GO:0051258: protein polymerization	3.20E-04
28	GO:0034243: regulation of transcription elongation from RNA polymerase II promoter	3.20E-04
29	GO:0010033: response to organic substance	3.20E-04
30	GO:0006641: triglyceride metabolic process	3.20E-04
31	GO:0009660: amyloplast organization	3.20E-04
32	GO:0046686: response to cadmium ion	3.68E-04
33	GO:0019563: glycerol catabolic process	5.26E-04
34	GO:0061158: 3'-UTR-mediated mRNA destabilization	5.26E-04
35	GO:0030029: actin filament-based process	5.26E-04
36	GO:0060968: regulation of gene silencing	5.26E-04
37	GO:0032786: positive regulation of DNA-templated transcription, elongation	5.26E-04
38	GO:0042344: indole glucosinolate catabolic process	5.26E-04
39	GO:0009737: response to abscisic acid	7.45E-04
40	GO:0071786: endoplasmic reticulum tubular network organization	7.53E-04
41	GO:0006882: cellular zinc ion homeostasis	7.53E-04
42	GO:0048194: Golgi vesicle budding	7.53E-04
43	GO:0006020: inositol metabolic process	7.53E-04
44	GO:0006072: glycerol-3-phosphate metabolic process	7.53E-04
45	GO:0015749: monosaccharide transport	7.53E-04
46	GO:0006809: nitric oxide biosynthetic process	7.53E-04
47	GO:0009399: nitrogen fixation	7.53E-04
48	GO:0016192: vesicle-mediated transport	8.11E-04
49	GO:0010188: response to microbial phytotoxin	9.98E-04
50	GO:0006878: cellular copper ion homeostasis	9.98E-04
51	GO:0015743: malate transport	9.98E-04
52	GO:0033320: UDP-D-xylose biosynthetic process	9.98E-04
53	GO:0006536: glutamate metabolic process	9.98E-04
54	GO:0043097: pyrimidine nucleoside salvage	1.26E-03
55	GO:0005513: detection of calcium ion	1.26E-03
56	GO:0006914: autophagy	1.44E-03
57	GO:0006206: pyrimidine nucleobase metabolic process	1.55E-03
58	GO:0006014: D-ribose metabolic process	1.55E-03
59	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.55E-03
60	GO:0015691: cadmium ion transport	1.55E-03
61	GO:0048827: phyllome development	1.55E-03
62	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	1.55E-03
63	GO:0009959: negative gravitropism	1.55E-03
64	GO:0048232: male gamete generation	1.55E-03
65	GO:0043248: proteasome assembly	1.55E-03
66	GO:0042732: D-xylose metabolic process	1.55E-03
67	GO:0010358: leaf shaping	1.55E-03
68	GO:0009612: response to mechanical stimulus	1.86E-03
69	GO:0006694: steroid biosynthetic process	1.86E-03
70	GO:0048280: vesicle fusion with Golgi apparatus	1.86E-03
71	GO:0031930: mitochondria-nucleus signaling pathway	1.86E-03
72	GO:0098869: cellular oxidant detoxification	2.18E-03
73	GO:0046470: phosphatidylcholine metabolic process	2.18E-03
74	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	2.18E-03
75	GO:0010311: lateral root formation	2.33E-03
76	GO:0006979: response to oxidative stress	2.42E-03
77	GO:0006499: N-terminal protein myristoylation	2.45E-03
78	GO:0006605: protein targeting	2.52E-03
79	GO:0010078: maintenance of root meristem identity	2.52E-03
80	GO:0009819: drought recovery	2.52E-03
81	GO:0006526: arginine biosynthetic process	2.88E-03
82	GO:0006972: hyperosmotic response	2.88E-03
83	GO:0046916: cellular transition metal ion homeostasis	3.26E-03
84	GO:0009051: pentose-phosphate shunt, oxidative branch	3.26E-03
85	GO:0006970: response to osmotic stress	3.54E-03
86	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.65E-03
87	GO:0006535: cysteine biosynthetic process from serine	4.06E-03
88	GO:0009688: abscisic acid biosynthetic process	4.06E-03
89	GO:0006896: Golgi to vacuole transport	4.06E-03
90	GO:0006325: chromatin organization	4.06E-03
91	GO:0052544: defense response by callose deposition in cell wall	4.48E-03
92	GO:0010015: root morphogenesis	4.48E-03
93	GO:0071365: cellular response to auxin stimulus	4.92E-03
94	GO:0012501: programmed cell death	4.92E-03
95	GO:0010102: lateral root morphogenesis	5.37E-03
96	GO:0006006: glucose metabolic process	5.37E-03
97	GO:0007034: vacuolar transport	5.84E-03
98	GO:0009933: meristem structural organization	5.84E-03
99	GO:0048467: gynoecium development	5.84E-03
100	GO:0006541: glutamine metabolic process	5.84E-03
101	GO:0002237: response to molecule of bacterial origin	5.84E-03
102	GO:0048367: shoot system development	5.92E-03
103	GO:0005985: sucrose metabolic process	6.32E-03
104	GO:0090351: seedling development	6.32E-03
105	GO:0007033: vacuole organization	6.32E-03
106	GO:0009225: nucleotide-sugar metabolic process	6.32E-03
107	GO:0007031: peroxisome organization	6.32E-03
108	GO:0010167: response to nitrate	6.32E-03
109	GO:0009651: response to salt stress	6.39E-03
110	GO:0006863: purine nucleobase transport	6.81E-03
111	GO:0000162: tryptophan biosynthetic process	6.81E-03
112	GO:0048364: root development	7.32E-03
113	GO:0045333: cellular respiration	7.32E-03
114	GO:2000377: regulation of reactive oxygen species metabolic process	7.32E-03
115	GO:0019344: cysteine biosynthetic process	7.32E-03
116	GO:0009269: response to desiccation	8.38E-03
117	GO:0048278: vesicle docking	8.38E-03
118	GO:0030433: ubiquitin-dependent ERAD pathway	8.92E-03
119	GO:0031348: negative regulation of defense response	8.92E-03
120	GO:0009845: seed germination	9.35E-03
121	GO:0071215: cellular response to abscisic acid stimulus	9.48E-03
122	GO:0055114: oxidation-reduction process	1.05E-02
123	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.06E-02
124	GO:0042147: retrograde transport, endosome to Golgi	1.06E-02
125	GO:0042391: regulation of membrane potential	1.12E-02
126	GO:0080022: primary root development	1.12E-02
127	GO:0000413: protein peptidyl-prolyl isomerization	1.12E-02
128	GO:0010118: stomatal movement	1.12E-02
129	GO:0015991: ATP hydrolysis coupled proton transport	1.12E-02
130	GO:0042631: cellular response to water deprivation	1.12E-02
131	GO:0010154: fruit development	1.18E-02
132	GO:0046323: glucose import	1.18E-02
133	GO:0061025: membrane fusion	1.25E-02
134	GO:0042752: regulation of circadian rhythm	1.25E-02
135	GO:0009749: response to glucose	1.31E-02
136	GO:0019252: starch biosynthetic process	1.31E-02
137	GO:0009851: auxin biosynthetic process	1.31E-02
138	GO:0006623: protein targeting to vacuole	1.31E-02
139	GO:0010183: pollen tube guidance	1.31E-02
140	GO:0006891: intra-Golgi vesicle-mediated transport	1.37E-02
141	GO:0010193: response to ozone	1.37E-02
142	GO:0006635: fatty acid beta-oxidation	1.37E-02
143	GO:0009617: response to bacterium	1.43E-02
144	GO:0016032: viral process	1.44E-02
145	GO:0009630: gravitropism	1.44E-02
146	GO:0009409: response to cold	1.48E-02
147	GO:0035556: intracellular signal transduction	1.54E-02
148	GO:0009567: double fertilization forming a zygote and endosperm	1.58E-02
149	GO:0010286: heat acclimation	1.64E-02
150	GO:0051607: defense response to virus	1.71E-02
151	GO:0001666: response to hypoxia	1.79E-02
152	GO:0016126: sterol biosynthetic process	1.79E-02
153	GO:0010029: regulation of seed germination	1.86E-02
154	GO:0009816: defense response to bacterium, incompatible interaction	1.86E-02
155	GO:0006906: vesicle fusion	1.93E-02
156	GO:0009627: systemic acquired resistance	1.93E-02
157	GO:0006888: ER to Golgi vesicle-mediated transport	2.00E-02
158	GO:0048573: photoperiodism, flowering	2.00E-02
159	GO:0006950: response to stress	2.00E-02
160	GO:0009817: defense response to fungus, incompatible interaction	2.16E-02
161	GO:0006811: ion transport	2.31E-02
162	GO:0009631: cold acclimation	2.39E-02
163	GO:0010043: response to zinc ion	2.39E-02
164	GO:0010119: regulation of stomatal movement	2.39E-02
165	GO:0046777: protein autophosphorylation	2.46E-02
166	GO:0045087: innate immune response	2.55E-02
167	GO:0016051: carbohydrate biosynthetic process	2.55E-02
168	GO:0009867: jasmonic acid mediated signaling pathway	2.55E-02
169	GO:0006099: tricarboxylic acid cycle	2.63E-02
170	GO:0030001: metal ion transport	2.80E-02
171	GO:0007165: signal transduction	2.81E-02
172	GO:0006886: intracellular protein transport	2.84E-02
173	GO:0006631: fatty acid metabolic process	2.88E-02
174	GO:0008283: cell proliferation	3.06E-02
175	GO:0006468: protein phosphorylation	3.15E-02
176	GO:0009965: leaf morphogenesis	3.32E-02
177	GO:0009414: response to water deprivation	3.38E-02
178	GO:0006855: drug transmembrane transport	3.41E-02
179	GO:0042742: defense response to bacterium	3.48E-02
180	GO:0016310: phosphorylation	3.56E-02
181	GO:0009873: ethylene-activated signaling pathway	4.37E-02
182	GO:0009626: plant-type hypersensitive response	4.45E-02
183	GO:0015031: protein transport	4.67E-02
184	GO:0018105: peptidyl-serine phosphorylation	4.95E-02
185	GO:0006396: RNA processing	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
2	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
3	GO:0004846: urate oxidase activity	0.00E+00
4	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
5	GO:0004370: glycerol kinase activity	0.00E+00
6	GO:0008777: acetylornithine deacetylase activity	0.00E+00
7	GO:0015211: purine nucleoside transmembrane transporter activity	0.00E+00
8	GO:1990446: U1 snRNP binding	0.00E+00
9	GO:0010293: abscisic aldehyde oxidase activity	0.00E+00
10	GO:0004012: phospholipid-translocating ATPase activity	5.48E-05
11	GO:0004869: cysteine-type endopeptidase inhibitor activity	9.51E-05
12	GO:0003867: 4-aminobutyrate transaminase activity	1.40E-04
13	GO:0015207: adenine transmembrane transporter activity	1.40E-04
14	GO:0009679: hexose:proton symporter activity	1.40E-04
15	GO:0046870: cadmium ion binding	1.40E-04
16	GO:0015208: guanine transmembrane transporter activity	1.40E-04
17	GO:0004112: cyclic-nucleotide phosphodiesterase activity	1.40E-04
18	GO:0015294: solute:cation symporter activity	1.40E-04
19	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	1.40E-04
20	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	3.20E-04
21	GO:0019200: carbohydrate kinase activity	3.20E-04
22	GO:0032791: lead ion binding	3.20E-04
23	GO:0004839: ubiquitin activating enzyme activity	3.20E-04
24	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.21E-04
25	GO:0005047: signal recognition particle binding	5.26E-04
26	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	5.26E-04
27	GO:0015086: cadmium ion transmembrane transporter activity	7.53E-04
28	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	7.53E-04
29	GO:0004108: citrate (Si)-synthase activity	7.53E-04
30	GO:0003727: single-stranded RNA binding	7.83E-04
31	GO:0004031: aldehyde oxidase activity	9.98E-04
32	GO:0050302: indole-3-acetaldehyde oxidase activity	9.98E-04
33	GO:0005253: anion channel activity	9.98E-04
34	GO:0000993: RNA polymerase II core binding	9.98E-04
35	GO:0009916: alternative oxidase activity	9.98E-04
36	GO:0004834: tryptophan synthase activity	9.98E-04
37	GO:0004345: glucose-6-phosphate dehydrogenase activity	9.98E-04
38	GO:0043015: gamma-tubulin binding	9.98E-04
39	GO:0015210: uracil transmembrane transporter activity	9.98E-04
40	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.26E-03
41	GO:0004356: glutamate-ammonia ligase activity	1.26E-03
42	GO:0015145: monosaccharide transmembrane transporter activity	1.26E-03
43	GO:0008641: small protein activating enzyme activity	1.26E-03
44	GO:0036402: proteasome-activating ATPase activity	1.55E-03
45	GO:0048040: UDP-glucuronate decarboxylase activity	1.55E-03
46	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.86E-03
47	GO:0004747: ribokinase activity	1.86E-03
48	GO:0004602: glutathione peroxidase activity	1.86E-03
49	GO:0004124: cysteine synthase activity	1.86E-03
50	GO:0070403: NAD+ binding	1.86E-03
51	GO:0070300: phosphatidic acid binding	1.86E-03
52	GO:0004849: uridine kinase activity	1.86E-03
53	GO:0004620: phospholipase activity	2.18E-03
54	GO:0015140: malate transmembrane transporter activity	2.18E-03
55	GO:0005096: GTPase activator activity	2.33E-03
56	GO:0004525: ribonuclease III activity	2.52E-03
57	GO:0008865: fructokinase activity	2.52E-03
58	GO:0050897: cobalt ion binding	2.56E-03
59	GO:0004630: phospholipase D activity	2.88E-03
60	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.88E-03
61	GO:0000149: SNARE binding	3.06E-03
62	GO:0005524: ATP binding	3.07E-03
63	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.26E-03
64	GO:0005484: SNAP receptor activity	3.61E-03
65	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	3.65E-03
66	GO:0005515: protein binding	4.67E-03
67	GO:0005516: calmodulin binding	5.98E-03
68	GO:0030552: cAMP binding	6.32E-03
69	GO:0004867: serine-type endopeptidase inhibitor activity	6.32E-03
70	GO:0030553: cGMP binding	6.32E-03
71	GO:0017025: TBP-class protein binding	6.32E-03
72	GO:0043130: ubiquitin binding	7.32E-03
73	GO:0043424: protein histidine kinase binding	7.84E-03
74	GO:0005345: purine nucleobase transmembrane transporter activity	7.84E-03
75	GO:0005216: ion channel activity	7.84E-03
76	GO:0005509: calcium ion binding	8.29E-03
77	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	8.87E-03
78	GO:0030170: pyridoxal phosphate binding	9.59E-03
79	GO:0015144: carbohydrate transmembrane transporter activity	1.03E-02
80	GO:0005249: voltage-gated potassium channel activity	1.12E-02
81	GO:0030551: cyclic nucleotide binding	1.12E-02
82	GO:0016301: kinase activity	1.14E-02
83	GO:0005351: sugar:proton symporter activity	1.17E-02
84	GO:0003713: transcription coactivator activity	1.18E-02
85	GO:0004872: receptor activity	1.31E-02
86	GO:0004674: protein serine/threonine kinase activity	1.34E-02
87	GO:0008237: metallopeptidase activity	1.64E-02
88	GO:0005200: structural constituent of cytoskeleton	1.64E-02
89	GO:0000287: magnesium ion binding	1.82E-02
90	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.93E-02
91	GO:0030247: polysaccharide binding	2.00E-02
92	GO:0004683: calmodulin-dependent protein kinase activity	2.00E-02
93	GO:0004497: monooxygenase activity	2.30E-02
94	GO:0004222: metalloendopeptidase activity	2.31E-02
95	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.39E-02
96	GO:0003746: translation elongation factor activity	2.55E-02
97	GO:0050661: NADP binding	2.80E-02
98	GO:0051537: 2 iron, 2 sulfur cluster binding	3.23E-02
99	GO:0043621: protein self-association	3.23E-02
100	GO:0005506: iron ion binding	3.41E-02
101	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.41E-02
102	GO:0031625: ubiquitin protein ligase binding	4.06E-02
103	GO:0022857: transmembrane transporter activity	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0031981: nuclear lumen	0.00E+00
2	GO:0071008: U2-type post-mRNA release spliceosomal complex	0.00E+00
3	GO:0005785: signal recognition particle receptor complex	0.00E+00
4	GO:0030140: trans-Golgi network transport vesicle	3.90E-05
5	GO:0005886: plasma membrane	9.65E-05
6	GO:0005829: cytosol	1.37E-04
7	GO:0032044: DSIF complex	1.40E-04
8	GO:0005737: cytoplasm	2.66E-04
9	GO:0031902: late endosome membrane	3.73E-04
10	GO:0005783: endoplasmic reticulum	4.12E-04
11	GO:0071782: endoplasmic reticulum tubular network	7.53E-04
12	GO:0005794: Golgi apparatus	8.97E-04
13	GO:0005770: late endosome	9.78E-04
14	GO:0033179: proton-transporting V-type ATPase, V0 domain	9.98E-04
15	GO:0005776: autophagosome	9.98E-04
16	GO:0005773: vacuole	1.83E-03
17	GO:0031597: cytosolic proteasome complex	1.86E-03
18	GO:0000815: ESCRT III complex	1.86E-03
19	GO:0016363: nuclear matrix	1.86E-03
20	GO:0031595: nuclear proteasome complex	2.18E-03
21	GO:0012507: ER to Golgi transport vesicle membrane	2.52E-03
22	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	2.52E-03
23	GO:0000325: plant-type vacuole	2.56E-03
24	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.88E-03
25	GO:0031201: SNARE complex	3.33E-03
26	GO:0008540: proteasome regulatory particle, base subcomplex	3.65E-03
27	GO:0016021: integral component of membrane	4.82E-03
28	GO:0005789: endoplasmic reticulum membrane	5.01E-03
29	GO:0010008: endosome membrane	5.92E-03
30	GO:0009506: plasmodesma	6.26E-03
31	GO:0005802: trans-Golgi network	6.57E-03
32	GO:0005774: vacuolar membrane	6.79E-03
33	GO:0070469: respiratory chain	7.84E-03
34	GO:0031410: cytoplasmic vesicle	8.92E-03
35	GO:0030136: clathrin-coated vesicle	1.06E-02
36	GO:0009705: plant-type vacuole membrane	1.19E-02
37	GO:0031965: nuclear membrane	1.31E-02
38	GO:0005777: peroxisome	1.71E-02
39	GO:0005768: endosome	3.05E-02
40	GO:0031966: mitochondrial membrane	3.59E-02
41	GO:0000502: proteasome complex	3.78E-02
42	GO:0005887: integral component of plasma membrane	4.59E-02