co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G33220

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007172: signal complex assembly	0.00E+00
2	GO:0090627: plant epidermal cell differentiation	0.00E+00
3	GO:0032928: regulation of superoxide anion generation	0.00E+00
4	GO:0018160: peptidyl-pyrromethane cofactor linkage	0.00E+00
5	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
6	GO:0033231: carbohydrate export	0.00E+00
7	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
8	GO:0015995: chlorophyll biosynthetic process	1.09E-11
9	GO:0015979: photosynthesis	6.40E-09
10	GO:0006782: protoporphyrinogen IX biosynthetic process	1.23E-08
11	GO:0006783: heme biosynthetic process	9.28E-07
12	GO:0000476: maturation of 4.5S rRNA	9.33E-05
13	GO:0000967: rRNA 5'-end processing	9.33E-05
14	GO:0033206: meiotic cytokinesis	9.33E-05
15	GO:0043007: maintenance of rDNA	9.33E-05
16	GO:1902334: fructose export from vacuole to cytoplasm	9.33E-05
17	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	9.33E-05
18	GO:0015755: fructose transport	9.33E-05
19	GO:0006779: porphyrin-containing compound biosynthetic process	9.72E-05
20	GO:0010218: response to far red light	1.14E-04
21	GO:0009750: response to fructose	1.37E-04
22	GO:0010114: response to red light	2.00E-04
23	GO:0016122: xanthophyll metabolic process	2.20E-04
24	GO:0034470: ncRNA processing	2.20E-04
25	GO:0009768: photosynthesis, light harvesting in photosystem I	3.24E-04
26	GO:0051260: protein homooligomerization	3.56E-04
27	GO:0090391: granum assembly	3.67E-04
28	GO:0045493: xylan catabolic process	3.67E-04
29	GO:0009740: gibberellic acid mediated signaling pathway	4.38E-04
30	GO:0010306: rhamnogalacturonan II biosynthetic process	5.28E-04
31	GO:0009741: response to brassinosteroid	5.80E-04
32	GO:0042938: dipeptide transport	7.02E-04
33	GO:0009765: photosynthesis, light harvesting	7.02E-04
34	GO:0030007: cellular potassium ion homeostasis	7.02E-04
35	GO:0007275: multicellular organism development	7.44E-04
36	GO:0040008: regulation of growth	8.83E-04
37	GO:0010117: photoprotection	8.88E-04
38	GO:0009823: cytokinin catabolic process	8.88E-04
39	GO:0009734: auxin-activated signaling pathway	9.83E-04
40	GO:0010029: regulation of seed germination	1.07E-03
41	GO:0009913: epidermal cell differentiation	1.08E-03
42	GO:0042176: regulation of protein catabolic process	1.08E-03
43	GO:0009733: response to auxin	1.10E-03
44	GO:0009735: response to cytokinin	1.21E-03
45	GO:0009942: longitudinal axis specification	1.29E-03
46	GO:0010189: vitamin E biosynthetic process	1.29E-03
47	GO:2000033: regulation of seed dormancy process	1.29E-03
48	GO:0018298: protein-chromophore linkage	1.30E-03
49	GO:0009645: response to low light intensity stimulus	1.51E-03
50	GO:0009769: photosynthesis, light harvesting in photosystem II	1.51E-03
51	GO:0009637: response to blue light	1.64E-03
52	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	1.75E-03
53	GO:0009690: cytokinin metabolic process	1.75E-03
54	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.75E-03
55	GO:0009642: response to light intensity	1.75E-03
56	GO:0046620: regulation of organ growth	1.75E-03
57	GO:0006353: DNA-templated transcription, termination	1.75E-03
58	GO:0007389: pattern specification process	2.00E-03
59	GO:0009657: plastid organization	2.00E-03
60	GO:0009640: photomorphogenesis	2.10E-03
61	GO:0009926: auxin polar transport	2.10E-03
62	GO:0010206: photosystem II repair	2.25E-03
63	GO:0034765: regulation of ion transmembrane transport	2.25E-03
64	GO:0009664: plant-type cell wall organization	2.63E-03
65	GO:0009688: abscisic acid biosynthetic process	2.80E-03
66	GO:0006949: syncytium formation	2.80E-03
67	GO:0006995: cellular response to nitrogen starvation	2.80E-03
68	GO:0043085: positive regulation of catalytic activity	3.09E-03
69	GO:1903507: negative regulation of nucleic acid-templated transcription	3.09E-03
70	GO:0009698: phenylpropanoid metabolic process	3.09E-03
71	GO:0009773: photosynthetic electron transport in photosystem I	3.09E-03
72	GO:0015706: nitrate transport	3.38E-03
73	GO:0010207: photosystem II assembly	4.01E-03
74	GO:0009934: regulation of meristem structural organization	4.01E-03
75	GO:0010187: negative regulation of seed germination	5.01E-03
76	GO:2000377: regulation of reactive oxygen species metabolic process	5.01E-03
77	GO:0009863: salicylic acid mediated signaling pathway	5.01E-03
78	GO:0007017: microtubule-based process	5.36E-03
79	GO:0009269: response to desiccation	5.72E-03
80	GO:2000022: regulation of jasmonic acid mediated signaling pathway	6.09E-03
81	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	6.47E-03
82	GO:0070417: cellular response to cold	7.25E-03
83	GO:0006662: glycerol ether metabolic process	8.06E-03
84	GO:0048868: pollen tube development	8.06E-03
85	GO:0007018: microtubule-based movement	8.47E-03
86	GO:0009646: response to absence of light	8.47E-03
87	GO:0048825: cotyledon development	8.90E-03
88	GO:0009749: response to glucose	8.90E-03
89	GO:0010193: response to ozone	9.33E-03
90	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	9.33E-03
91	GO:0010583: response to cyclopentenone	9.78E-03
92	GO:0009826: unidimensional cell growth	1.03E-02
93	GO:0009828: plant-type cell wall loosening	1.07E-02
94	GO:0010252: auxin homeostasis	1.07E-02
95	GO:0071805: potassium ion transmembrane transport	1.11E-02
96	GO:0080167: response to karrikin	1.32E-02
97	GO:0010411: xyloglucan metabolic process	1.36E-02
98	GO:0000160: phosphorelay signal transduction system	1.51E-02
99	GO:0010119: regulation of stomatal movement	1.62E-02
100	GO:0007568: aging	1.62E-02
101	GO:0009867: jasmonic acid mediated signaling pathway	1.73E-02
102	GO:0016051: carbohydrate biosynthetic process	1.73E-02
103	GO:0034599: cellular response to oxidative stress	1.78E-02
104	GO:0006629: lipid metabolic process	1.96E-02
105	GO:0009744: response to sucrose	2.07E-02
106	GO:0009644: response to high light intensity	2.18E-02
107	GO:0031347: regulation of defense response	2.37E-02
108	GO:0042538: hyperosmotic salinity response	2.43E-02
109	GO:0009736: cytokinin-activated signaling pathway	2.55E-02
110	GO:0006364: rRNA processing	2.55E-02
111	GO:0009585: red, far-red light phototransduction	2.55E-02
112	GO:0010224: response to UV-B	2.62E-02
113	GO:0006857: oligopeptide transport	2.68E-02
114	GO:0006417: regulation of translation	2.75E-02
115	GO:0009624: response to nematode	3.28E-02
116	GO:0006396: RNA processing	3.35E-02
117	GO:0009742: brassinosteroid mediated signaling pathway	3.42E-02
118	GO:0009611: response to wounding	3.55E-02
119	GO:0009845: seed germination	4.07E-02
120	GO:0007623: circadian rhythm	4.84E-02
121	GO:0045490: pectin catabolic process	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
2	GO:0045550: geranylgeranyl reductase activity	0.00E+00
3	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
4	GO:0004418: hydroxymethylbilane synthase activity	0.00E+00
5	GO:0015284: fructose uniporter activity	0.00E+00
6	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
7	GO:0015269: calcium-activated potassium channel activity	0.00E+00
8	GO:0004853: uroporphyrinogen decarboxylase activity	0.00E+00
9	GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor	9.33E-05
10	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	9.33E-05
11	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	9.33E-05
12	GO:0019172: glyoxalase III activity	2.20E-04
13	GO:0005353: fructose transmembrane transporter activity	2.20E-04
14	GO:0016868: intramolecular transferase activity, phosphotransferases	2.20E-04
15	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	2.20E-04
16	GO:0031409: pigment binding	2.63E-04
17	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	5.28E-04
18	GO:0016851: magnesium chelatase activity	5.28E-04
19	GO:0009044: xylan 1,4-beta-xylosidase activity	7.02E-04
20	GO:0046556: alpha-L-arabinofuranosidase activity	7.02E-04
21	GO:0042936: dipeptide transporter activity	7.02E-04
22	GO:0019139: cytokinin dehydrogenase activity	8.88E-04
23	GO:0016168: chlorophyll binding	1.07E-03
24	GO:0004462: lactoylglutathione lyase activity	1.08E-03
25	GO:0015271: outward rectifier potassium channel activity	1.08E-03
26	GO:0005267: potassium channel activity	2.00E-03
27	GO:0000989: transcription factor activity, transcription factor binding	2.25E-03
28	GO:0043621: protein self-association	2.27E-03
29	GO:0009672: auxin:proton symporter activity	2.52E-03
30	GO:0008047: enzyme activator activity	2.80E-03
31	GO:0015020: glucuronosyltransferase activity	2.80E-03
32	GO:0047372: acylglycerol lipase activity	3.09E-03
33	GO:0003777: microtubule motor activity	3.11E-03
34	GO:0008081: phosphoric diester hydrolase activity	3.69E-03
35	GO:0031072: heat shock protein binding	3.69E-03
36	GO:0010329: auxin efflux transmembrane transporter activity	3.69E-03
37	GO:0008131: primary amine oxidase activity	4.01E-03
38	GO:0051119: sugar transmembrane transporter activity	4.33E-03
39	GO:0004190: aspartic-type endopeptidase activity	4.33E-03
40	GO:0003714: transcription corepressor activity	5.01E-03
41	GO:0008289: lipid binding	5.23E-03
42	GO:0005216: ion channel activity	5.36E-03
43	GO:0033612: receptor serine/threonine kinase binding	5.72E-03
44	GO:0030570: pectate lyase activity	6.47E-03
45	GO:0003756: protein disulfide isomerase activity	6.85E-03
46	GO:0003727: single-stranded RNA binding	6.85E-03
47	GO:0047134: protein-disulfide reductase activity	7.25E-03
48	GO:0004791: thioredoxin-disulfide reductase activity	8.47E-03
49	GO:0048038: quinone binding	9.33E-03
50	GO:0000156: phosphorelay response regulator activity	1.02E-02
51	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.02E-02
52	GO:0005200: structural constituent of cytoskeleton	1.11E-02
53	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.11E-02
54	GO:0008375: acetylglucosaminyltransferase activity	1.31E-02
55	GO:0005096: GTPase activator activity	1.51E-02
56	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.62E-02
57	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.84E-02
58	GO:0004185: serine-type carboxypeptidase activity	2.07E-02
59	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.94E-02
60	GO:0016874: ligase activity	3.15E-02
61	GO:0051082: unfolded protein binding	3.28E-02
62	GO:0015035: protein disulfide oxidoreductase activity	3.35E-02
63	GO:0005515: protein binding	3.75E-02
64	GO:0016829: lyase activity	4.07E-02
65	GO:0004252: serine-type endopeptidase activity	4.15E-02
66	GO:0043565: sequence-specific DNA binding	4.61E-02
67	GO:0008017: microtubule binding	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
2	GO:0009534: chloroplast thylakoid	8.56E-14
3	GO:0009535: chloroplast thylakoid membrane	1.29E-12
4	GO:0009507: chloroplast	1.72E-11
5	GO:0009941: chloroplast envelope	2.41E-07
6	GO:0009522: photosystem I	6.21E-07
7	GO:0009543: chloroplast thylakoid lumen	3.03E-06
8	GO:0009517: PSII associated light-harvesting complex II	7.97E-06
9	GO:0009570: chloroplast stroma	9.22E-06
10	GO:0009579: thylakoid	5.09E-05
11	GO:0009538: photosystem I reaction center	5.09E-05
12	GO:0010287: plastoglobule	5.32E-05
13	GO:0030093: chloroplast photosystem I	2.20E-04
14	GO:0030076: light-harvesting complex	2.34E-04
15	GO:0031969: chloroplast membrane	3.21E-04
16	GO:0010007: magnesium chelatase complex	3.67E-04
17	GO:0009531: secondary cell wall	5.28E-04
18	GO:0042646: plastid nucleoid	5.28E-04
19	GO:0009523: photosystem II	6.66E-04
20	GO:0030660: Golgi-associated vesicle membrane	7.02E-04
21	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	7.02E-04
22	GO:0016020: membrane	7.78E-04
23	GO:0016363: nuclear matrix	1.29E-03
24	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.75E-03
25	GO:0045298: tubulin complex	2.25E-03
26	GO:0005765: lysosomal membrane	3.09E-03
27	GO:0030095: chloroplast photosystem II	4.01E-03
28	GO:0005623: cell	5.12E-03
29	GO:0005871: kinesin complex	7.25E-03
30	GO:0005874: microtubule	1.28E-02
31	GO:0000325: plant-type vacuole	1.62E-02
32	GO:0031977: thylakoid lumen	1.95E-02
33	GO:0016021: integral component of membrane	2.41E-02
34	GO:0010008: endosome membrane	2.94E-02
35	GO:0009706: chloroplast inner membrane	3.28E-02
36	GO:0009705: plant-type vacuole membrane	4.84E-02