co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G33090

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000390: spliceosomal complex disassembly	0.00E+00
2	GO:0005997: xylulose metabolic process	0.00E+00
3	GO:0010378: temperature compensation of the circadian clock	0.00E+00
4	GO:0000380: alternative mRNA splicing, via spliceosome	2.48E-05
5	GO:0035556: intracellular signal transduction	1.32E-04
6	GO:0015812: gamma-aminobutyric acid transport	1.35E-04
7	GO:0032958: inositol phosphate biosynthetic process	1.35E-04
8	GO:0009817: defense response to fungus, incompatible interaction	2.04E-04
9	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	3.08E-04
10	GO:0042542: response to hydrogen peroxide	3.73E-04
11	GO:0042344: indole glucosinolate catabolic process	5.13E-04
12	GO:0090630: activation of GTPase activity	5.13E-04
13	GO:0042256: mature ribosome assembly	5.13E-04
14	GO:0007165: signal transduction	6.47E-04
15	GO:1901332: negative regulation of lateral root development	7.34E-04
16	GO:0006020: inositol metabolic process	7.34E-04
17	GO:0010601: positive regulation of auxin biosynthetic process	7.34E-04
18	GO:0015749: monosaccharide transport	7.34E-04
19	GO:0006646: phosphatidylethanolamine biosynthetic process	9.73E-04
20	GO:0015743: malate transport	9.73E-04
21	GO:1903830: magnesium ion transmembrane transport	9.73E-04
22	GO:0009409: response to cold	9.87E-04
23	GO:0042752: regulation of circadian rhythm	1.01E-03
24	GO:0043097: pyrimidine nucleoside salvage	1.23E-03
25	GO:0048578: positive regulation of long-day photoperiodism, flowering	1.23E-03
26	GO:0010286: heat acclimation	1.47E-03
27	GO:0006206: pyrimidine nucleobase metabolic process	1.51E-03
28	GO:0007623: circadian rhythm	1.76E-03
29	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.81E-03
30	GO:0010038: response to metal ion	2.12E-03
31	GO:0015693: magnesium ion transport	2.12E-03
32	GO:0048437: floral organ development	2.12E-03
33	GO:0009414: response to water deprivation	2.13E-03
34	GO:0009737: response to abscisic acid	2.41E-03
35	GO:0009415: response to water	2.46E-03
36	GO:0032508: DNA duplex unwinding	2.46E-03
37	GO:0010043: response to zinc ion	2.46E-03
38	GO:0045087: innate immune response	2.70E-03
39	GO:0001510: RNA methylation	2.81E-03
40	GO:0030001: metal ion transport	3.07E-03
41	GO:0046916: cellular transition metal ion homeostasis	3.17E-03
42	GO:0008202: steroid metabolic process	3.55E-03
43	GO:0000209: protein polyubiquitination	3.60E-03
44	GO:0008643: carbohydrate transport	3.75E-03
45	GO:0055062: phosphate ion homeostasis	3.95E-03
46	GO:0009970: cellular response to sulfate starvation	3.95E-03
47	GO:0006995: cellular response to nitrogen starvation	3.95E-03
48	GO:0000165: MAPK cascade	4.19E-03
49	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.19E-03
50	GO:0009682: induced systemic resistance	4.36E-03
51	GO:0052544: defense response by callose deposition in cell wall	4.36E-03
52	GO:0016925: protein sumoylation	4.79E-03
53	GO:0016567: protein ubiquitination	4.86E-03
54	GO:0018107: peptidyl-threonine phosphorylation	5.22E-03
55	GO:2000012: regulation of auxin polar transport	5.22E-03
56	GO:0010540: basipetal auxin transport	5.68E-03
57	GO:0019853: L-ascorbic acid biosynthetic process	6.14E-03
58	GO:0006406: mRNA export from nucleus	7.11E-03
59	GO:0009695: jasmonic acid biosynthetic process	7.62E-03
60	GO:0016575: histone deacetylation	7.62E-03
61	GO:0003333: amino acid transmembrane transport	8.14E-03
62	GO:0048511: rhythmic process	8.14E-03
63	GO:0006334: nucleosome assembly	8.14E-03
64	GO:0010227: floral organ abscission	9.21E-03
65	GO:0006012: galactose metabolic process	9.21E-03
66	GO:0042391: regulation of membrane potential	1.09E-02
67	GO:0080022: primary root development	1.09E-02
68	GO:0010501: RNA secondary structure unwinding	1.09E-02
69	GO:0000413: protein peptidyl-prolyl isomerization	1.09E-02
70	GO:0010051: xylem and phloem pattern formation	1.09E-02
71	GO:0046323: glucose import	1.15E-02
72	GO:0010228: vegetative to reproductive phase transition of meristem	1.20E-02
73	GO:0008654: phospholipid biosynthetic process	1.27E-02
74	GO:0009556: microsporogenesis	1.27E-02
75	GO:0006623: protein targeting to vacuole	1.27E-02
76	GO:0006635: fatty acid beta-oxidation	1.34E-02
77	GO:0009617: response to bacterium	1.37E-02
78	GO:0010468: regulation of gene expression	1.37E-02
79	GO:1901657: glycosyl compound metabolic process	1.46E-02
80	GO:0019760: glucosinolate metabolic process	1.53E-02
81	GO:0006952: defense response	1.56E-02
82	GO:0009911: positive regulation of flower development	1.73E-02
83	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.80E-02
84	GO:0009651: response to salt stress	1.82E-02
85	GO:0006970: response to osmotic stress	1.92E-02
86	GO:0048573: photoperiodism, flowering	1.95E-02
87	GO:0006950: response to stress	1.95E-02
88	GO:0016049: cell growth	2.02E-02
89	GO:0048481: plant ovule development	2.09E-02
90	GO:0080167: response to karrikin	2.21E-02
91	GO:0010218: response to far red light	2.24E-02
92	GO:0010200: response to chitin	2.28E-02
93	GO:0010119: regulation of stomatal movement	2.32E-02
94	GO:0009631: cold acclimation	2.32E-02
95	GO:0044550: secondary metabolite biosynthetic process	2.40E-02
96	GO:0016051: carbohydrate biosynthetic process	2.48E-02
97	GO:0009637: response to blue light	2.48E-02
98	GO:0006886: intracellular protein transport	2.73E-02
99	GO:0006812: cation transport	3.49E-02
100	GO:0042538: hyperosmotic salinity response	3.49E-02
101	GO:0009585: red, far-red light phototransduction	3.67E-02
102	GO:0051603: proteolysis involved in cellular protein catabolic process	3.76E-02
103	GO:0009909: regulation of flower development	3.95E-02
104	GO:0009553: embryo sac development	4.62E-02
105	GO:0018105: peptidyl-serine phosphorylation	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0080082: esculin beta-glucosidase activity	0.00E+00
2	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
3	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
4	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
5	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
6	GO:1990446: U1 snRNP binding	0.00E+00
7	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
8	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
9	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
10	GO:0004567: beta-mannosidase activity	0.00E+00
11	GO:0005253: anion channel activity	1.51E-05
12	GO:0004856: xylulokinase activity	1.35E-04
13	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	1.35E-04
14	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	1.35E-04
15	GO:0009679: hexose:proton symporter activity	1.35E-04
16	GO:0035671: enone reductase activity	1.35E-04
17	GO:0000829: inositol heptakisphosphate kinase activity	1.35E-04
18	GO:0080079: cellobiose glucosidase activity	1.35E-04
19	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	1.35E-04
20	GO:0046870: cadmium ion binding	1.35E-04
21	GO:0000828: inositol hexakisphosphate kinase activity	1.35E-04
22	GO:0015180: L-alanine transmembrane transporter activity	3.11E-04
23	GO:0032791: lead ion binding	3.11E-04
24	GO:0004609: phosphatidylserine decarboxylase activity	3.11E-04
25	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	3.11E-04
26	GO:0031624: ubiquitin conjugating enzyme binding	3.49E-04
27	GO:0004096: catalase activity	5.13E-04
28	GO:0019948: SUMO activating enzyme activity	5.13E-04
29	GO:0017150: tRNA dihydrouridine synthase activity	5.13E-04
30	GO:0004707: MAP kinase activity	5.84E-04
31	GO:0004165: dodecenoyl-CoA delta-isomerase activity	7.34E-04
32	GO:0004300: enoyl-CoA hydratase activity	7.34E-04
33	GO:0015189: L-lysine transmembrane transporter activity	7.34E-04
34	GO:0015181: arginine transmembrane transporter activity	7.34E-04
35	GO:0005313: L-glutamate transmembrane transporter activity	9.73E-04
36	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.23E-03
37	GO:0015145: monosaccharide transmembrane transporter activity	1.23E-03
38	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.23E-03
39	GO:0019137: thioglucosidase activity	1.51E-03
40	GO:0005247: voltage-gated chloride channel activity	1.51E-03
41	GO:0004629: phospholipase C activity	1.51E-03
42	GO:0015562: efflux transmembrane transporter activity	1.51E-03
43	GO:0004849: uridine kinase activity	1.81E-03
44	GO:0004435: phosphatidylinositol phospholipase C activity	1.81E-03
45	GO:0070300: phosphatidic acid binding	1.81E-03
46	GO:0102483: scopolin beta-glucosidase activity	1.93E-03
47	GO:0015140: malate transmembrane transporter activity	2.12E-03
48	GO:0004033: aldo-keto reductase (NADP) activity	2.46E-03
49	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	2.81E-03
50	GO:0008422: beta-glucosidase activity	2.94E-03
51	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.17E-03
52	GO:0004842: ubiquitin-protein transferase activity	3.91E-03
53	GO:0015020: glucuronosyltransferase activity	3.95E-03
54	GO:0016301: kinase activity	4.18E-03
55	GO:0061630: ubiquitin protein ligase activity	4.28E-03
56	GO:0004177: aminopeptidase activity	4.36E-03
57	GO:0015095: magnesium ion transmembrane transporter activity	5.22E-03
58	GO:0030552: cAMP binding	6.14E-03
59	GO:0030553: cGMP binding	6.14E-03
60	GO:0004407: histone deacetylase activity	7.11E-03
61	GO:0005216: ion channel activity	7.62E-03
62	GO:0008324: cation transmembrane transporter activity	7.62E-03
63	GO:0019706: protein-cysteine S-palmitoyltransferase activity	8.14E-03
64	GO:0005249: voltage-gated potassium channel activity	1.09E-02
65	GO:0015297: antiporter activity	1.09E-02
66	GO:0030551: cyclic nucleotide binding	1.09E-02
67	GO:0005351: sugar:proton symporter activity	1.12E-02
68	GO:0046873: metal ion transmembrane transporter activity	1.15E-02
69	GO:0008375: acetylglucosaminyltransferase activity	1.88E-02
70	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.94E-02
71	GO:0005096: GTPase activator activity	2.17E-02
72	GO:0008233: peptidase activity	2.17E-02
73	GO:0050897: cobalt ion binding	2.32E-02
74	GO:0003697: single-stranded DNA binding	2.48E-02
75	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.85E-02
76	GO:0004722: protein serine/threonine phosphatase activity	2.90E-02
77	GO:0005509: calcium ion binding	2.99E-02
78	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.31E-02
79	GO:0003690: double-stranded DNA binding	3.76E-02
80	GO:0015171: amino acid transmembrane transporter activity	3.95E-02
81	GO:0031625: ubiquitin protein ligase binding	3.95E-02
82	GO:0016874: ligase activity	4.52E-02
83	GO:0022857: transmembrane transporter activity	4.52E-02
84	GO:0008026: ATP-dependent helicase activity	4.91E-02
85	GO:0005515: protein binding	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0071008: U2-type post-mRNA release spliceosomal complex	0.00E+00
2	GO:0031981: nuclear lumen	0.00E+00
3	GO:0005777: peroxisome	2.20E-05
4	GO:0000151: ubiquitin ligase complex	2.04E-04
5	GO:0032777: Piccolo NuA4 histone acetyltransferase complex	3.11E-04
6	GO:0032586: protein storage vacuole membrane	9.73E-04
7	GO:0034707: chloride channel complex	1.51E-03
8	GO:0000786: nucleosome	2.58E-03
9	GO:0000326: protein storage vacuole	2.81E-03
10	GO:0030665: clathrin-coated vesicle membrane	3.55E-03
11	GO:0017119: Golgi transport complex	3.95E-03
12	GO:0016020: membrane	4.88E-03
13	GO:0005802: trans-Golgi network	6.17E-03
14	GO:0016021: integral component of membrane	6.60E-03
15	GO:0005618: cell wall	8.15E-03
16	GO:0005783: endoplasmic reticulum	8.95E-03
17	GO:0005887: integral component of plasma membrane	9.71E-03
18	GO:0031965: nuclear membrane	1.27E-02
19	GO:0009506: plasmodesma	1.41E-02
20	GO:0005829: cytosol	2.79E-02
21	GO:0031902: late endosome membrane	2.80E-02
22	GO:0005622: intracellular	2.81E-02
23	GO:0031966: mitochondrial membrane	3.49E-02
24	GO:0005773: vacuole	3.91E-02
25	GO:0009505: plant-type cell wall	4.37E-02
26	GO:0000139: Golgi membrane	4.80E-02