GO Enrichment Analysis of Co-expressed Genes with
AT4G32590
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010027: thylakoid membrane organization | 2.34E-05 |
| 2 | GO:0015995: chlorophyll biosynthetic process | 3.05E-05 |
| 3 | GO:1902458: positive regulation of stomatal opening | 5.64E-05 |
| 4 | GO:0034337: RNA folding | 5.64E-05 |
| 5 | GO:0010207: photosystem II assembly | 1.02E-04 |
| 6 | GO:0015979: photosynthesis | 1.30E-04 |
| 7 | GO:0035304: regulation of protein dephosphorylation | 1.37E-04 |
| 8 | GO:0010115: regulation of abscisic acid biosynthetic process | 1.37E-04 |
| 9 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 1.37E-04 |
| 10 | GO:0090391: granum assembly | 2.34E-04 |
| 11 | GO:0051604: protein maturation | 2.34E-04 |
| 12 | GO:0009306: protein secretion | 2.38E-04 |
| 13 | GO:0015994: chlorophyll metabolic process | 4.56E-04 |
| 14 | GO:0080110: sporopollenin biosynthetic process | 5.78E-04 |
| 15 | GO:0045038: protein import into chloroplast thylakoid membrane | 5.78E-04 |
| 16 | GO:0006655: phosphatidylglycerol biosynthetic process | 7.07E-04 |
| 17 | GO:0006561: proline biosynthetic process | 7.07E-04 |
| 18 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 7.07E-04 |
| 19 | GO:0042549: photosystem II stabilization | 7.07E-04 |
| 20 | GO:1901259: chloroplast rRNA processing | 8.44E-04 |
| 21 | GO:0006400: tRNA modification | 9.85E-04 |
| 22 | GO:0010196: nonphotochemical quenching | 9.85E-04 |
| 23 | GO:0006605: protein targeting | 1.13E-03 |
| 24 | GO:2000070: regulation of response to water deprivation | 1.13E-03 |
| 25 | GO:0010492: maintenance of shoot apical meristem identity | 1.13E-03 |
| 26 | GO:0015996: chlorophyll catabolic process | 1.29E-03 |
| 27 | GO:0010206: photosystem II repair | 1.45E-03 |
| 28 | GO:0048507: meristem development | 1.45E-03 |
| 29 | GO:0010205: photoinhibition | 1.62E-03 |
| 30 | GO:0008152: metabolic process | 1.67E-03 |
| 31 | GO:0009688: abscisic acid biosynthetic process | 1.79E-03 |
| 32 | GO:0019684: photosynthesis, light reaction | 1.97E-03 |
| 33 | GO:0009750: response to fructose | 1.97E-03 |
| 34 | GO:0009773: photosynthetic electron transport in photosystem I | 1.97E-03 |
| 35 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.16E-03 |
| 36 | GO:0010628: positive regulation of gene expression | 2.36E-03 |
| 37 | GO:0019953: sexual reproduction | 3.40E-03 |
| 38 | GO:0010584: pollen exine formation | 4.34E-03 |
| 39 | GO:0042335: cuticle development | 4.83E-03 |
| 40 | GO:0010182: sugar mediated signaling pathway | 5.09E-03 |
| 41 | GO:0048544: recognition of pollen | 5.35E-03 |
| 42 | GO:0016032: viral process | 6.15E-03 |
| 43 | GO:0006855: drug transmembrane transport | 1.44E-02 |
| 44 | GO:0006364: rRNA processing | 1.59E-02 |
| 45 | GO:0009735: response to cytokinin | 1.63E-02 |
| 46 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.63E-02 |
| 47 | GO:0006857: oligopeptide transport | 1.67E-02 |
| 48 | GO:0043086: negative regulation of catalytic activity | 1.79E-02 |
| 49 | GO:0042744: hydrogen peroxide catabolic process | 2.63E-02 |
| 50 | GO:0009451: RNA modification | 3.07E-02 |
| 51 | GO:0007166: cell surface receptor signaling pathway | 3.32E-02 |
| 52 | GO:0006979: response to oxidative stress | 3.63E-02 |
| 53 | GO:0055114: oxidation-reduction process | 4.02E-02 |
| 54 | GO:0042254: ribosome biogenesis | 4.17E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 3 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 4 | GO:0016851: magnesium chelatase activity | 1.75E-06 |
| 5 | GO:0005528: FK506 binding | 2.60E-06 |
| 6 | GO:0034256: chlorophyll(ide) b reductase activity | 5.64E-05 |
| 7 | GO:0010242: oxygen evolving activity | 5.64E-05 |
| 8 | GO:0016491: oxidoreductase activity | 6.89E-05 |
| 9 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.64E-05 |
| 10 | GO:0016630: protochlorophyllide reductase activity | 1.37E-04 |
| 11 | GO:0047746: chlorophyllase activity | 1.37E-04 |
| 12 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 1.37E-04 |
| 13 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 4.56E-04 |
| 14 | GO:0003959: NADPH dehydrogenase activity | 5.78E-04 |
| 15 | GO:0042578: phosphoric ester hydrolase activity | 7.07E-04 |
| 16 | GO:0016787: hydrolase activity | 1.04E-03 |
| 17 | GO:0043022: ribosome binding | 1.13E-03 |
| 18 | GO:0016746: transferase activity, transferring acyl groups | 2.13E-03 |
| 19 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.36E-03 |
| 20 | GO:0031072: heat shock protein binding | 2.36E-03 |
| 21 | GO:0008266: poly(U) RNA binding | 2.56E-03 |
| 22 | GO:0003756: protein disulfide isomerase activity | 4.34E-03 |
| 23 | GO:0050662: coenzyme binding | 5.35E-03 |
| 24 | GO:0016597: amino acid binding | 7.29E-03 |
| 25 | GO:0003824: catalytic activity | 8.39E-03 |
| 26 | GO:0008236: serine-type peptidase activity | 8.81E-03 |
| 27 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 9.13E-03 |
| 28 | GO:0003746: translation elongation factor activity | 1.08E-02 |
| 29 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.18E-02 |
| 30 | GO:0004185: serine-type carboxypeptidase activity | 1.29E-02 |
| 31 | GO:0016887: ATPase activity | 1.55E-02 |
| 32 | GO:0016298: lipase activity | 1.63E-02 |
| 33 | GO:0016874: ligase activity | 1.96E-02 |
| 34 | GO:0051082: unfolded protein binding | 2.04E-02 |
| 35 | GO:0030246: carbohydrate binding | 2.40E-02 |
| 36 | GO:0019843: rRNA binding | 2.40E-02 |
| 37 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.87E-02 |
| 38 | GO:0046910: pectinesterase inhibitor activity | 2.87E-02 |
| 39 | GO:0003723: RNA binding | 3.21E-02 |
| 40 | GO:0005509: calcium ion binding | 3.33E-02 |
| 41 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.58E-02 |
| 42 | GO:0004601: peroxidase activity | 4.12E-02 |
| 43 | GO:0016788: hydrolase activity, acting on ester bonds | 4.17E-02 |
| 44 | GO:0008233: peptidase activity | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 4.20E-24 |
| 2 | GO:0009534: chloroplast thylakoid | 3.52E-14 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.81E-13 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 2.38E-10 |
| 5 | GO:0009570: chloroplast stroma | 2.67E-09 |
| 6 | GO:0031977: thylakoid lumen | 3.77E-08 |
| 7 | GO:0009941: chloroplast envelope | 6.37E-08 |
| 8 | GO:0009579: thylakoid | 4.89E-07 |
| 9 | GO:0010007: magnesium chelatase complex | 7.23E-07 |
| 10 | GO:0009515: granal stacked thylakoid | 5.64E-05 |
| 11 | GO:0009654: photosystem II oxygen evolving complex | 1.63E-04 |
| 12 | GO:0033281: TAT protein transport complex | 2.34E-04 |
| 13 | GO:0019898: extrinsic component of membrane | 3.49E-04 |
| 14 | GO:0009526: plastid envelope | 4.56E-04 |
| 15 | GO:0055035: plastid thylakoid membrane | 5.78E-04 |
| 16 | GO:0032040: small-subunit processome | 2.16E-03 |
| 17 | GO:0010287: plastoglobule | 2.45E-03 |
| 18 | GO:0030095: chloroplast photosystem II | 2.56E-03 |
| 19 | GO:0031969: chloroplast membrane | 6.77E-03 |
| 20 | GO:0016021: integral component of membrane | 3.00E-02 |
| 21 | GO:0009705: plant-type vacuole membrane | 3.02E-02 |
| 22 | GO:0005840: ribosome | 3.78E-02 |