GO Enrichment Analysis of Co-expressed Genes with
AT4G31820
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 2 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 3 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 4 | GO:0042493: response to drug | 0.00E+00 |
| 5 | GO:0015979: photosynthesis | 5.61E-06 |
| 6 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.08E-04 |
| 7 | GO:0043489: RNA stabilization | 1.08E-04 |
| 8 | GO:0000481: maturation of 5S rRNA | 1.08E-04 |
| 9 | GO:0033481: galacturonate biosynthetic process | 1.08E-04 |
| 10 | GO:0042371: vitamin K biosynthetic process | 1.08E-04 |
| 11 | GO:0034337: RNA folding | 1.08E-04 |
| 12 | GO:0006006: glucose metabolic process | 2.25E-04 |
| 13 | GO:0001736: establishment of planar polarity | 2.52E-04 |
| 14 | GO:0009926: auxin polar transport | 2.62E-04 |
| 15 | GO:0006518: peptide metabolic process | 4.19E-04 |
| 16 | GO:0051639: actin filament network formation | 6.01E-04 |
| 17 | GO:0009800: cinnamic acid biosynthetic process | 6.01E-04 |
| 18 | GO:0009650: UV protection | 6.01E-04 |
| 19 | GO:1901332: negative regulation of lateral root development | 6.01E-04 |
| 20 | GO:0042335: cuticle development | 6.53E-04 |
| 21 | GO:0000413: protein peptidyl-prolyl isomerization | 6.53E-04 |
| 22 | GO:0015976: carbon utilization | 7.98E-04 |
| 23 | GO:0051764: actin crosslink formation | 7.98E-04 |
| 24 | GO:2000122: negative regulation of stomatal complex development | 7.98E-04 |
| 25 | GO:0010037: response to carbon dioxide | 7.98E-04 |
| 26 | GO:0006461: protein complex assembly | 1.01E-03 |
| 27 | GO:0042549: photosystem II stabilization | 1.23E-03 |
| 28 | GO:0006559: L-phenylalanine catabolic process | 1.23E-03 |
| 29 | GO:0009913: epidermal cell differentiation | 1.23E-03 |
| 30 | GO:0006596: polyamine biosynthetic process | 1.23E-03 |
| 31 | GO:0048759: xylem vessel member cell differentiation | 1.23E-03 |
| 32 | GO:0042372: phylloquinone biosynthetic process | 1.47E-03 |
| 33 | GO:0006694: steroid biosynthetic process | 1.47E-03 |
| 34 | GO:0010019: chloroplast-nucleus signaling pathway | 1.47E-03 |
| 35 | GO:0009733: response to auxin | 1.57E-03 |
| 36 | GO:0000160: phosphorelay signal transduction system | 1.66E-03 |
| 37 | GO:0010311: lateral root formation | 1.66E-03 |
| 38 | GO:0050829: defense response to Gram-negative bacterium | 1.73E-03 |
| 39 | GO:0009834: plant-type secondary cell wall biogenesis | 1.74E-03 |
| 40 | GO:0009631: cold acclimation | 1.82E-03 |
| 41 | GO:0009416: response to light stimulus | 1.88E-03 |
| 42 | GO:0008610: lipid biosynthetic process | 2.00E-03 |
| 43 | GO:0046620: regulation of organ growth | 2.00E-03 |
| 44 | GO:0030091: protein repair | 2.00E-03 |
| 45 | GO:0032508: DNA duplex unwinding | 2.00E-03 |
| 46 | GO:0009827: plant-type cell wall modification | 2.28E-03 |
| 47 | GO:0009657: plastid organization | 2.28E-03 |
| 48 | GO:0032544: plastid translation | 2.28E-03 |
| 49 | GO:0017004: cytochrome complex assembly | 2.28E-03 |
| 50 | GO:0009808: lignin metabolic process | 2.28E-03 |
| 51 | GO:0009051: pentose-phosphate shunt, oxidative branch | 2.57E-03 |
| 52 | GO:0048829: root cap development | 3.20E-03 |
| 53 | GO:0009736: cytokinin-activated signaling pathway | 3.43E-03 |
| 54 | GO:0000038: very long-chain fatty acid metabolic process | 3.53E-03 |
| 55 | GO:0009773: photosynthetic electron transport in photosystem I | 3.53E-03 |
| 56 | GO:0048765: root hair cell differentiation | 3.53E-03 |
| 57 | GO:0009725: response to hormone | 4.23E-03 |
| 58 | GO:0010102: lateral root morphogenesis | 4.23E-03 |
| 59 | GO:0010143: cutin biosynthetic process | 4.59E-03 |
| 60 | GO:0019253: reductive pentose-phosphate cycle | 4.59E-03 |
| 61 | GO:0010207: photosystem II assembly | 4.59E-03 |
| 62 | GO:0009225: nucleotide-sugar metabolic process | 4.96E-03 |
| 63 | GO:0019762: glucosinolate catabolic process | 5.35E-03 |
| 64 | GO:0006833: water transport | 5.35E-03 |
| 65 | GO:0000027: ribosomal large subunit assembly | 5.75E-03 |
| 66 | GO:0007010: cytoskeleton organization | 5.75E-03 |
| 67 | GO:0051017: actin filament bundle assembly | 5.75E-03 |
| 68 | GO:0009768: photosynthesis, light harvesting in photosystem I | 6.15E-03 |
| 69 | GO:0003333: amino acid transmembrane transport | 6.56E-03 |
| 70 | GO:0009734: auxin-activated signaling pathway | 6.85E-03 |
| 71 | GO:0009411: response to UV | 7.42E-03 |
| 72 | GO:0006284: base-excision repair | 7.87E-03 |
| 73 | GO:0009306: protein secretion | 7.87E-03 |
| 74 | GO:0009735: response to cytokinin | 8.20E-03 |
| 75 | GO:0009451: RNA modification | 8.59E-03 |
| 76 | GO:0034220: ion transmembrane transport | 8.79E-03 |
| 77 | GO:0010087: phloem or xylem histogenesis | 8.79E-03 |
| 78 | GO:0045489: pectin biosynthetic process | 9.26E-03 |
| 79 | GO:0009958: positive gravitropism | 9.26E-03 |
| 80 | GO:0006810: transport | 9.82E-03 |
| 81 | GO:0071554: cell wall organization or biogenesis | 1.07E-02 |
| 82 | GO:0000302: response to reactive oxygen species | 1.07E-02 |
| 83 | GO:0016132: brassinosteroid biosynthetic process | 1.07E-02 |
| 84 | GO:0009630: gravitropism | 1.12E-02 |
| 85 | GO:0009826: unidimensional cell growth | 1.25E-02 |
| 86 | GO:0071805: potassium ion transmembrane transport | 1.28E-02 |
| 87 | GO:0042254: ribosome biogenesis | 1.33E-02 |
| 88 | GO:0010027: thylakoid membrane organization | 1.39E-02 |
| 89 | GO:0010411: xyloglucan metabolic process | 1.56E-02 |
| 90 | GO:0016311: dephosphorylation | 1.62E-02 |
| 91 | GO:0030244: cellulose biosynthetic process | 1.68E-02 |
| 92 | GO:0018298: protein-chromophore linkage | 1.68E-02 |
| 93 | GO:0009407: toxin catabolic process | 1.80E-02 |
| 94 | GO:0010218: response to far red light | 1.80E-02 |
| 95 | GO:0010119: regulation of stomatal movement | 1.86E-02 |
| 96 | GO:0006865: amino acid transport | 1.92E-02 |
| 97 | GO:0045087: innate immune response | 1.99E-02 |
| 98 | GO:0009637: response to blue light | 1.99E-02 |
| 99 | GO:0034599: cellular response to oxidative stress | 2.05E-02 |
| 100 | GO:0006869: lipid transport | 2.12E-02 |
| 101 | GO:0006839: mitochondrial transport | 2.18E-02 |
| 102 | GO:0009414: response to water deprivation | 2.18E-02 |
| 103 | GO:0016042: lipid catabolic process | 2.32E-02 |
| 104 | GO:0010114: response to red light | 2.38E-02 |
| 105 | GO:0006281: DNA repair | 2.39E-02 |
| 106 | GO:0042546: cell wall biogenesis | 2.45E-02 |
| 107 | GO:0009636: response to toxic substance | 2.59E-02 |
| 108 | GO:0006855: drug transmembrane transport | 2.66E-02 |
| 109 | GO:0042538: hyperosmotic salinity response | 2.80E-02 |
| 110 | GO:0006813: potassium ion transport | 2.94E-02 |
| 111 | GO:0009409: response to cold | 3.28E-02 |
| 112 | GO:0006096: glycolytic process | 3.32E-02 |
| 113 | GO:0009624: response to nematode | 3.78E-02 |
| 114 | GO:0006396: RNA processing | 3.86E-02 |
| 115 | GO:0018105: peptidyl-serine phosphorylation | 3.86E-02 |
| 116 | GO:0009611: response to wounding | 4.32E-02 |
| 117 | GO:0042744: hydrogen peroxide catabolic process | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
| 2 | GO:0010487: thermospermine synthase activity | 0.00E+00 |
| 3 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 4 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 5 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.12E-05 |
| 6 | GO:0016768: spermine synthase activity | 1.08E-04 |
| 7 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 2.52E-04 |
| 8 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 2.52E-04 |
| 9 | GO:0005528: FK506 binding | 3.57E-04 |
| 10 | GO:0015079: potassium ion transmembrane transporter activity | 3.94E-04 |
| 11 | GO:0050734: hydroxycinnamoyltransferase activity | 4.19E-04 |
| 12 | GO:0045548: phenylalanine ammonia-lyase activity | 4.19E-04 |
| 13 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 4.19E-04 |
| 14 | GO:0001872: (1->3)-beta-D-glucan binding | 6.01E-04 |
| 15 | GO:0010011: auxin binding | 7.98E-04 |
| 16 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 7.98E-04 |
| 17 | GO:0010328: auxin influx transmembrane transporter activity | 7.98E-04 |
| 18 | GO:0050378: UDP-glucuronate 4-epimerase activity | 7.98E-04 |
| 19 | GO:0004659: prenyltransferase activity | 7.98E-04 |
| 20 | GO:0000156: phosphorelay response regulator activity | 9.72E-04 |
| 21 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.01E-03 |
| 22 | GO:0005509: calcium ion binding | 1.11E-03 |
| 23 | GO:0016413: O-acetyltransferase activity | 1.16E-03 |
| 24 | GO:0004130: cytochrome-c peroxidase activity | 1.23E-03 |
| 25 | GO:0016208: AMP binding | 1.23E-03 |
| 26 | GO:0016688: L-ascorbate peroxidase activity | 1.23E-03 |
| 27 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.47E-03 |
| 28 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.47E-03 |
| 29 | GO:0016788: hydrolase activity, acting on ester bonds | 2.11E-03 |
| 30 | GO:0050661: NADP binding | 2.26E-03 |
| 31 | GO:0052689: carboxylic ester hydrolase activity | 3.07E-03 |
| 32 | GO:0015386: potassium:proton antiporter activity | 3.53E-03 |
| 33 | GO:0004089: carbonate dehydratase activity | 4.23E-03 |
| 34 | GO:0008266: poly(U) RNA binding | 4.59E-03 |
| 35 | GO:0031409: pigment binding | 5.35E-03 |
| 36 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 5.35E-03 |
| 37 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 5.35E-03 |
| 38 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 5.35E-03 |
| 39 | GO:0019843: rRNA binding | 6.08E-03 |
| 40 | GO:0008017: microtubule binding | 8.79E-03 |
| 41 | GO:0030276: clathrin binding | 9.26E-03 |
| 42 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.07E-02 |
| 43 | GO:0051015: actin filament binding | 1.18E-02 |
| 44 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.31E-02 |
| 45 | GO:0015250: water channel activity | 1.39E-02 |
| 46 | GO:0016168: chlorophyll binding | 1.45E-02 |
| 47 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.51E-02 |
| 48 | GO:0005516: calmodulin binding | 1.54E-02 |
| 49 | GO:0102483: scopolin beta-glucosidase activity | 1.56E-02 |
| 50 | GO:0030247: polysaccharide binding | 1.56E-02 |
| 51 | GO:0004683: calmodulin-dependent protein kinase activity | 1.56E-02 |
| 52 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.56E-02 |
| 53 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.68E-02 |
| 54 | GO:0015238: drug transmembrane transporter activity | 1.74E-02 |
| 55 | GO:0004222: metalloendopeptidase activity | 1.80E-02 |
| 56 | GO:0030145: manganese ion binding | 1.86E-02 |
| 57 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.86E-02 |
| 58 | GO:0004871: signal transducer activity | 2.03E-02 |
| 59 | GO:0003993: acid phosphatase activity | 2.05E-02 |
| 60 | GO:0008422: beta-glucosidase activity | 2.12E-02 |
| 61 | GO:0004364: glutathione transferase activity | 2.31E-02 |
| 62 | GO:0005215: transporter activity | 2.55E-02 |
| 63 | GO:0015293: symporter activity | 2.59E-02 |
| 64 | GO:0051287: NAD binding | 2.73E-02 |
| 65 | GO:0003777: microtubule motor activity | 3.17E-02 |
| 66 | GO:0015171: amino acid transmembrane transporter activity | 3.17E-02 |
| 67 | GO:0045735: nutrient reservoir activity | 3.32E-02 |
| 68 | GO:0008289: lipid binding | 3.32E-02 |
| 69 | GO:0016746: transferase activity, transferring acyl groups | 3.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009543: chloroplast thylakoid lumen | 6.85E-14 |
| 2 | GO:0009579: thylakoid | 1.52E-10 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.12E-09 |
| 4 | GO:0009507: chloroplast | 2.46E-09 |
| 5 | GO:0031977: thylakoid lumen | 8.94E-09 |
| 6 | GO:0009941: chloroplast envelope | 8.54E-08 |
| 7 | GO:0009654: photosystem II oxygen evolving complex | 2.05E-07 |
| 8 | GO:0019898: extrinsic component of membrane | 1.14E-06 |
| 9 | GO:0009534: chloroplast thylakoid | 9.73E-06 |
| 10 | GO:0009570: chloroplast stroma | 1.07E-04 |
| 11 | GO:0030095: chloroplast photosystem II | 2.55E-04 |
| 12 | GO:0032432: actin filament bundle | 6.01E-04 |
| 13 | GO:0009533: chloroplast stromal thylakoid | 1.73E-03 |
| 14 | GO:0009986: cell surface | 1.73E-03 |
| 15 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.57E-03 |
| 16 | GO:0008180: COP9 signalosome | 2.57E-03 |
| 17 | GO:0005874: microtubule | 2.60E-03 |
| 18 | GO:0031969: chloroplast membrane | 2.71E-03 |
| 19 | GO:0005884: actin filament | 3.53E-03 |
| 20 | GO:0016020: membrane | 3.69E-03 |
| 21 | GO:0031225: anchored component of membrane | 3.69E-03 |
| 22 | GO:0048046: apoplast | 3.72E-03 |
| 23 | GO:0032040: small-subunit processome | 3.87E-03 |
| 24 | GO:0031012: extracellular matrix | 4.23E-03 |
| 25 | GO:0005618: cell wall | 4.41E-03 |
| 26 | GO:0030076: light-harvesting complex | 4.96E-03 |
| 27 | GO:0005886: plasma membrane | 6.05E-03 |
| 28 | GO:0030136: clathrin-coated vesicle | 8.32E-03 |
| 29 | GO:0009522: photosystem I | 9.74E-03 |
| 30 | GO:0009523: photosystem II | 1.02E-02 |
| 31 | GO:0005777: peroxisome | 1.10E-02 |
| 32 | GO:0046658: anchored component of plasma membrane | 1.11E-02 |
| 33 | GO:0032580: Golgi cisterna membrane | 1.23E-02 |
| 34 | GO:0005778: peroxisomal membrane | 1.28E-02 |
| 35 | GO:0030529: intracellular ribonucleoprotein complex | 1.39E-02 |
| 36 | GO:0019005: SCF ubiquitin ligase complex | 1.68E-02 |
| 37 | GO:0015934: large ribosomal subunit | 1.86E-02 |
| 38 | GO:0005768: endosome | 1.97E-02 |
| 39 | GO:0005819: spindle | 2.12E-02 |
| 40 | GO:0005840: ribosome | 2.38E-02 |
| 41 | GO:0000502: proteasome complex | 2.94E-02 |
| 42 | GO:0016021: integral component of membrane | 3.38E-02 |
| 43 | GO:0010287: plastoglobule | 4.27E-02 |