GO Enrichment Analysis of Co-expressed Genes with
AT4G31500
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance | 0.00E+00 |
| 2 | GO:0042891: antibiotic transport | 0.00E+00 |
| 3 | GO:0071578: zinc II ion transmembrane import | 0.00E+00 |
| 4 | GO:0010398: xylogalacturonan metabolic process | 0.00E+00 |
| 5 | GO:0000162: tryptophan biosynthetic process | 1.66E-06 |
| 6 | GO:0010941: regulation of cell death | 5.03E-05 |
| 7 | GO:0046520: sphingoid biosynthetic process | 5.03E-05 |
| 8 | GO:0052542: defense response by callose deposition | 1.23E-04 |
| 9 | GO:0015865: purine nucleotide transport | 1.23E-04 |
| 10 | GO:0042256: mature ribosome assembly | 2.11E-04 |
| 11 | GO:1902626: assembly of large subunit precursor of preribosome | 2.11E-04 |
| 12 | GO:0051176: positive regulation of sulfur metabolic process | 2.11E-04 |
| 13 | GO:2001289: lipid X metabolic process | 3.09E-04 |
| 14 | GO:0046902: regulation of mitochondrial membrane permeability | 3.09E-04 |
| 15 | GO:0010600: regulation of auxin biosynthetic process | 4.15E-04 |
| 16 | GO:0000460: maturation of 5.8S rRNA | 4.15E-04 |
| 17 | GO:0061088: regulation of sequestering of zinc ion | 4.15E-04 |
| 18 | GO:0030308: negative regulation of cell growth | 5.26E-04 |
| 19 | GO:0006564: L-serine biosynthetic process | 5.26E-04 |
| 20 | GO:0000470: maturation of LSU-rRNA | 6.44E-04 |
| 21 | GO:0010337: regulation of salicylic acid metabolic process | 6.44E-04 |
| 22 | GO:0010043: response to zinc ion | 6.92E-04 |
| 23 | GO:0000054: ribosomal subunit export from nucleus | 7.68E-04 |
| 24 | GO:0048280: vesicle fusion with Golgi apparatus | 7.68E-04 |
| 25 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 8.97E-04 |
| 26 | GO:0006955: immune response | 8.97E-04 |
| 27 | GO:0009808: lignin metabolic process | 1.17E-03 |
| 28 | GO:0006812: cation transport | 1.19E-03 |
| 29 | GO:0006896: Golgi to vacuole transport | 1.63E-03 |
| 30 | GO:0006995: cellular response to nitrogen starvation | 1.63E-03 |
| 31 | GO:0030148: sphingolipid biosynthetic process | 1.79E-03 |
| 32 | GO:0071365: cellular response to auxin stimulus | 1.96E-03 |
| 33 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 1.96E-03 |
| 34 | GO:0007034: vacuolar transport | 2.32E-03 |
| 35 | GO:0010053: root epidermal cell differentiation | 2.50E-03 |
| 36 | GO:0007010: cytoskeleton organization | 2.88E-03 |
| 37 | GO:0080147: root hair cell development | 2.88E-03 |
| 38 | GO:0016226: iron-sulfur cluster assembly | 3.50E-03 |
| 39 | GO:0009617: response to bacterium | 3.66E-03 |
| 40 | GO:0006012: galactose metabolic process | 3.71E-03 |
| 41 | GO:0071215: cellular response to abscisic acid stimulus | 3.71E-03 |
| 42 | GO:0042147: retrograde transport, endosome to Golgi | 4.15E-03 |
| 43 | GO:0045489: pectin biosynthetic process | 4.60E-03 |
| 44 | GO:0006885: regulation of pH | 4.60E-03 |
| 45 | GO:0048544: recognition of pollen | 4.83E-03 |
| 46 | GO:0009851: auxin biosynthetic process | 5.07E-03 |
| 47 | GO:0006623: protein targeting to vacuole | 5.07E-03 |
| 48 | GO:0006891: intra-Golgi vesicle-mediated transport | 5.32E-03 |
| 49 | GO:0009723: response to ethylene | 5.46E-03 |
| 50 | GO:0009630: gravitropism | 5.56E-03 |
| 51 | GO:0019761: glucosinolate biosynthetic process | 5.56E-03 |
| 52 | GO:0010200: response to chitin | 6.06E-03 |
| 53 | GO:0006904: vesicle docking involved in exocytosis | 6.33E-03 |
| 54 | GO:0006888: ER to Golgi vesicle-mediated transport | 7.68E-03 |
| 55 | GO:0008219: cell death | 8.24E-03 |
| 56 | GO:0048767: root hair elongation | 8.53E-03 |
| 57 | GO:0010311: lateral root formation | 8.53E-03 |
| 58 | GO:0048364: root development | 9.01E-03 |
| 59 | GO:0006839: mitochondrial transport | 1.07E-02 |
| 60 | GO:0006887: exocytosis | 1.10E-02 |
| 61 | GO:0009873: ethylene-activated signaling pathway | 1.12E-02 |
| 62 | GO:0009640: photomorphogenesis | 1.16E-02 |
| 63 | GO:0006813: potassium ion transport | 1.44E-02 |
| 64 | GO:0009611: response to wounding | 1.57E-02 |
| 65 | GO:0009737: response to abscisic acid | 1.61E-02 |
| 66 | GO:0006096: glycolytic process | 1.62E-02 |
| 67 | GO:0048367: shoot system development | 1.65E-02 |
| 68 | GO:0009626: plant-type hypersensitive response | 1.69E-02 |
| 69 | GO:0009742: brassinosteroid mediated signaling pathway | 1.92E-02 |
| 70 | GO:0009845: seed germination | 2.29E-02 |
| 71 | GO:0009790: embryo development | 2.41E-02 |
| 72 | GO:0006413: translational initiation | 2.59E-02 |
| 73 | GO:0071555: cell wall organization | 3.12E-02 |
| 74 | GO:0009733: response to auxin | 3.50E-02 |
| 75 | GO:0009409: response to cold | 4.21E-02 |
| 76 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.43E-02 |
| 77 | GO:0046777: protein autophosphorylation | 4.54E-02 |
| 78 | GO:0046686: response to cadmium ion | 4.83E-02 |
| 79 | GO:0045892: negative regulation of transcription, DNA-templated | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity | 0.00E+00 |
| 2 | GO:0015370: solute:sodium symporter activity | 0.00E+00 |
| 3 | GO:0005496: steroid binding | 4.70E-06 |
| 4 | GO:0045309: protein phosphorylated amino acid binding | 3.83E-05 |
| 5 | GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 5.03E-05 |
| 6 | GO:0000170: sphingosine hydroxylase activity | 5.03E-05 |
| 7 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 5.03E-05 |
| 8 | GO:0019904: protein domain specific binding | 5.51E-05 |
| 9 | GO:0047364: desulfoglucosinolate sulfotransferase activity | 1.23E-04 |
| 10 | GO:0042284: sphingolipid delta-4 desaturase activity | 1.23E-04 |
| 11 | GO:0045140: inositol phosphoceramide synthase activity | 1.23E-04 |
| 12 | GO:0004049: anthranilate synthase activity | 2.11E-04 |
| 13 | GO:0008430: selenium binding | 2.11E-04 |
| 14 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 2.11E-04 |
| 15 | GO:0016656: monodehydroascorbate reductase (NADH) activity | 3.09E-04 |
| 16 | GO:0043023: ribosomal large subunit binding | 3.09E-04 |
| 17 | GO:0004834: tryptophan synthase activity | 4.15E-04 |
| 18 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.15E-04 |
| 19 | GO:0015204: urea transmembrane transporter activity | 4.15E-04 |
| 20 | GO:0005471: ATP:ADP antiporter activity | 5.26E-04 |
| 21 | GO:0015562: efflux transmembrane transporter activity | 6.44E-04 |
| 22 | GO:0035252: UDP-xylosyltransferase activity | 6.44E-04 |
| 23 | GO:0004012: phospholipid-translocating ATPase activity | 7.68E-04 |
| 24 | GO:0004034: aldose 1-epimerase activity | 1.03E-03 |
| 25 | GO:0043022: ribosome binding | 1.03E-03 |
| 26 | GO:0004743: pyruvate kinase activity | 1.47E-03 |
| 27 | GO:0030955: potassium ion binding | 1.47E-03 |
| 28 | GO:0008047: enzyme activator activity | 1.63E-03 |
| 29 | GO:0004713: protein tyrosine kinase activity | 1.63E-03 |
| 30 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 2.14E-03 |
| 31 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.14E-03 |
| 32 | GO:0008146: sulfotransferase activity | 2.50E-03 |
| 33 | GO:0005385: zinc ion transmembrane transporter activity | 2.88E-03 |
| 34 | GO:0005524: ATP binding | 3.04E-03 |
| 35 | GO:0008324: cation transmembrane transporter activity | 3.08E-03 |
| 36 | GO:0030246: carbohydrate binding | 3.68E-03 |
| 37 | GO:0005451: monovalent cation:proton antiporter activity | 4.37E-03 |
| 38 | GO:0000287: magnesium ion binding | 4.64E-03 |
| 39 | GO:0016853: isomerase activity | 4.83E-03 |
| 40 | GO:0015299: solute:proton antiporter activity | 4.83E-03 |
| 41 | GO:0010181: FMN binding | 4.83E-03 |
| 42 | GO:0004872: receptor activity | 5.07E-03 |
| 43 | GO:0015385: sodium:proton antiporter activity | 5.81E-03 |
| 44 | GO:0005200: structural constituent of cytoskeleton | 6.33E-03 |
| 45 | GO:0000149: SNARE binding | 1.03E-02 |
| 46 | GO:0005484: SNAP receptor activity | 1.16E-02 |
| 47 | GO:0015293: symporter activity | 1.26E-02 |
| 48 | GO:0004674: protein serine/threonine kinase activity | 1.30E-02 |
| 49 | GO:0045735: nutrient reservoir activity | 1.62E-02 |
| 50 | GO:0005507: copper ion binding | 2.19E-02 |
| 51 | GO:0016301: kinase activity | 2.85E-02 |
| 52 | GO:0003743: translation initiation factor activity | 3.04E-02 |
| 53 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.23E-02 |
| 54 | GO:0003824: catalytic activity | 3.42E-02 |
| 55 | GO:0005515: protein binding | 3.56E-02 |
| 56 | GO:0050660: flavin adenine dinucleotide binding | 4.12E-02 |
| 57 | GO:0004672: protein kinase activity | 4.56E-02 |
| 58 | GO:0020037: heme binding | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016021: integral component of membrane | 1.88E-05 |
| 2 | GO:0009570: chloroplast stroma | 8.38E-05 |
| 3 | GO:0005950: anthranilate synthase complex | 1.23E-04 |
| 4 | GO:0005886: plasma membrane | 1.70E-04 |
| 5 | GO:0070062: extracellular exosome | 3.09E-04 |
| 6 | GO:0005775: vacuolar lumen | 3.09E-04 |
| 7 | GO:0030140: trans-Golgi network transport vesicle | 6.44E-04 |
| 8 | GO:0005802: trans-Golgi network | 8.23E-04 |
| 9 | GO:0030687: preribosome, large subunit precursor | 8.97E-04 |
| 10 | GO:0012507: ER to Golgi transport vesicle membrane | 1.03E-03 |
| 11 | GO:0016604: nuclear body | 1.47E-03 |
| 12 | GO:0005794: Golgi apparatus | 3.64E-03 |
| 13 | GO:0005770: late endosome | 4.60E-03 |
| 14 | GO:0000145: exocyst | 5.56E-03 |
| 15 | GO:0005783: endoplasmic reticulum | 6.33E-03 |
| 16 | GO:0005829: cytosol | 7.52E-03 |
| 17 | GO:0005774: vacuolar membrane | 7.63E-03 |
| 18 | GO:0000325: plant-type vacuole | 9.12E-03 |
| 19 | GO:0005789: endoplasmic reticulum membrane | 1.06E-02 |
| 20 | GO:0031201: SNARE complex | 1.10E-02 |
| 21 | GO:0031902: late endosome membrane | 1.10E-02 |
| 22 | GO:0005856: cytoskeleton | 1.26E-02 |
| 23 | GO:0016020: membrane | 1.50E-02 |
| 24 | GO:0005635: nuclear envelope | 1.51E-02 |
| 25 | GO:0010008: endosome membrane | 1.65E-02 |
| 26 | GO:0009506: plasmodesma | 1.91E-02 |
| 27 | GO:0005768: endosome | 2.81E-02 |
| 28 | GO:0022627: cytosolic small ribosomal subunit | 3.32E-02 |
| 29 | GO:0009536: plastid | 3.82E-02 |
| 30 | GO:0000139: Golgi membrane | 4.21E-02 |
| 31 | GO:0009941: chloroplast envelope | 4.33E-02 |