Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G31390

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901038: cyanidin 3-O-glucoside metabolic process0.00E+00
2GO:0009264: deoxyribonucleotide catabolic process0.00E+00
3GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene0.00E+00
4GO:0009813: flavonoid biosynthetic process3.67E-09
5GO:0051555: flavonol biosynthetic process2.22E-07
6GO:0006796: phosphate-containing compound metabolic process4.77E-06
7GO:0005978: glycogen biosynthetic process1.29E-05
8GO:0009698: phenylpropanoid metabolic process3.76E-05
9GO:0080167: response to karrikin4.24E-05
10GO:0009718: anthocyanin-containing compound biosynthetic process5.16E-05
11GO:0010224: response to UV-B6.20E-05
12GO:0009225: nucleotide-sugar metabolic process6.80E-05
13GO:0019388: galactose catabolic process9.72E-05
14GO:1900386: positive regulation of flavonol biosynthetic process9.72E-05
15GO:0071395: cellular response to jasmonic acid stimulus9.72E-05
16GO:0009411: response to UV1.32E-04
17GO:0010253: UDP-rhamnose biosynthetic process1.68E-04
18GO:0046417: chorismate metabolic process1.68E-04
19GO:0040009: regulation of growth rate1.68E-04
20GO:0019252: starch biosynthetic process2.16E-04
21GO:0009590: detection of gravity2.48E-04
22GO:0042823: pyridoxal phosphate biosynthetic process2.48E-04
23GO:0034613: cellular protein localization3.33E-04
24GO:0009435: NAD biosynthetic process4.25E-04
25GO:0016120: carotene biosynthetic process4.25E-04
26GO:0071368: cellular response to cytokinin stimulus4.25E-04
27GO:0010304: PSII associated light-harvesting complex II catabolic process5.22E-04
28GO:0042732: D-xylose metabolic process5.22E-04
29GO:0010315: auxin efflux5.22E-04
30GO:0098869: cellular oxidant detoxification7.28E-04
31GO:0009733: response to auxin8.44E-04
32GO:0009909: regulation of flower development1.03E-03
33GO:0048268: clathrin coat assembly1.19E-03
34GO:0009073: aromatic amino acid family biosynthetic process1.44E-03
35GO:0048229: gametophyte development1.44E-03
36GO:0006006: glucose metabolic process1.72E-03
37GO:0055114: oxidation-reduction process1.81E-03
38GO:0019853: L-ascorbic acid biosynthetic process2.01E-03
39GO:0006487: protein N-linked glycosylation2.32E-03
40GO:0019915: lipid storage2.64E-03
41GO:0042127: regulation of cell proliferation3.15E-03
42GO:0010584: pollen exine formation3.15E-03
43GO:0016117: carotenoid biosynthetic process3.32E-03
44GO:0009723: response to ethylene3.95E-03
45GO:0030154: cell differentiation4.53E-03
46GO:0010252: auxin homeostasis4.85E-03
47GO:0009911: positive regulation of flower development5.47E-03
48GO:0048573: photoperiodism, flowering6.13E-03
49GO:0010311: lateral root formation6.80E-03
50GO:0008152: metabolic process6.86E-03
51GO:0006811: ion transport7.04E-03
52GO:0010119: regulation of stomatal movement7.27E-03
53GO:0007568: aging7.27E-03
54GO:0006897: endocytosis8.74E-03
55GO:0009926: auxin polar transport9.25E-03
56GO:0031347: regulation of defense response1.06E-02
57GO:0006812: cation transport1.09E-02
58GO:0009809: lignin biosynthetic process1.14E-02
59GO:0006096: glycolytic process1.28E-02
60GO:0042545: cell wall modification1.43E-02
61GO:0018105: peptidyl-serine phosphorylation1.49E-02
62GO:0009845: seed germination1.81E-02
63GO:0006633: fatty acid biosynthetic process2.02E-02
64GO:0016036: cellular response to phosphate starvation2.05E-02
65GO:0007623: circadian rhythm2.16E-02
66GO:0045490: pectin catabolic process2.16E-02
67GO:0009739: response to gibberellin2.34E-02
68GO:0046777: protein autophosphorylation3.60E-02
69GO:0016042: lipid catabolic process4.43E-02
70GO:0009751: response to salicylic acid4.48E-02
71GO:0009408: response to heat4.53E-02
72GO:0007165: signal transduction4.66E-02
73GO:0009753: response to jasmonic acid4.76E-02
RankGO TermAdjusted P value
1GO:0047213: anthocyanidin 3-O-glucosyltransferase activity0.00E+00
2GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity0.00E+00
3GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity0.00E+00
4GO:0045486: naringenin 3-dioxygenase activity0.00E+00
5GO:0016719: carotene 7,8-desaturase activity0.00E+00
6GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
7GO:0008734: L-aspartate oxidase activity0.00E+00
8GO:0047918: GDP-mannose 3,5-epimerase activity0.00E+00
9GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity0.00E+00
10GO:0045430: chalcone isomerase activity1.81E-06
11GO:0004427: inorganic diphosphatase activity9.64E-06
12GO:0000287: magnesium ion binding2.69E-05
13GO:0031418: L-ascorbic acid binding8.70E-05
14GO:0080043: quercetin 3-O-glucosyltransferase activity8.73E-05
15GO:0080044: quercetin 7-O-glucosyltransferase activity8.73E-05
16GO:0004106: chorismate mutase activity9.72E-05
17GO:0004614: phosphoglucomutase activity9.72E-05
18GO:0016868: intramolecular transferase activity, phosphotransferases9.72E-05
19GO:0008460: dTDP-glucose 4,6-dehydratase activity9.72E-05
20GO:0010280: UDP-L-rhamnose synthase activity9.72E-05
21GO:0050377: UDP-glucose 4,6-dehydratase activity9.72E-05
22GO:0033897: ribonuclease T2 activity1.68E-04
23GO:0008253: 5'-nucleotidase activity1.68E-04
24GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity2.48E-04
25GO:0008194: UDP-glycosyltransferase activity2.52E-04
26GO:0008878: glucose-1-phosphate adenylyltransferase activity3.33E-04
27GO:0045431: flavonol synthase activity4.25E-04
28GO:0016462: pyrophosphatase activity5.22E-04
29GO:0035252: UDP-xylosyltransferase activity5.22E-04
30GO:0016688: L-ascorbate peroxidase activity5.22E-04
31GO:0008429: phosphatidylethanolamine binding5.22E-04
32GO:0102425: myricetin 3-O-glucosyltransferase activity7.28E-04
33GO:0102360: daphnetin 3-O-glucosyltransferase activity7.28E-04
34GO:0016621: cinnamoyl-CoA reductase activity7.28E-04
35GO:0047893: flavonol 3-O-glucosyltransferase activity8.37E-04
36GO:0015288: porin activity8.37E-04
37GO:0016757: transferase activity, transferring glycosyl groups1.00E-03
38GO:0016207: 4-coumarate-CoA ligase activity1.07E-03
39GO:0009672: auxin:proton symporter activity1.19E-03
40GO:0030955: potassium ion binding1.19E-03
41GO:0004743: pyruvate kinase activity1.19E-03
42GO:0005545: 1-phosphatidylinositol binding1.31E-03
43GO:0004521: endoribonuclease activity1.58E-03
44GO:0010329: auxin efflux transmembrane transporter activity1.72E-03
45GO:0005216: ion channel activity2.48E-03
46GO:0004176: ATP-dependent peptidase activity2.64E-03
47GO:0035251: UDP-glucosyltransferase activity2.64E-03
48GO:0004540: ribonuclease activity2.64E-03
49GO:0030276: clathrin binding3.69E-03
50GO:0016853: isomerase activity3.87E-03
51GO:0003824: catalytic activity4.58E-03
52GO:0008237: metallopeptidase activity5.05E-03
53GO:0016491: oxidoreductase activity5.77E-03
54GO:0008375: acetylglucosaminyltransferase activity5.91E-03
55GO:0009931: calcium-dependent protein serine/threonine kinase activity5.91E-03
56GO:0004683: calmodulin-dependent protein kinase activity6.13E-03
57GO:0008236: serine-type peptidase activity6.35E-03
58GO:0004222: metalloendopeptidase activity7.04E-03
59GO:0004185: serine-type carboxypeptidase activity9.25E-03
60GO:0035091: phosphatidylinositol binding9.77E-03
61GO:0051287: NAD binding1.06E-02
62GO:0016298: lipase activity1.17E-02
63GO:0045330: aspartyl esterase activity1.23E-02
64GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.31E-02
65GO:0016874: ligase activity1.40E-02
66GO:0030599: pectinesterase activity1.40E-02
67GO:0016758: transferase activity, transferring hexosyl groups1.68E-02
68GO:0046910: pectinesterase inhibitor activity2.05E-02
69GO:0046982: protein heterodimerization activity2.90E-02
70GO:0043531: ADP binding3.14E-02
71GO:0052689: carboxylic ester hydrolase activity3.68E-02
72GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.90E-02
73GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding4.21E-02
74GO:0003700: transcription factor activity, sequence-specific DNA binding4.72E-02
RankGO TermAdjusted P value
1GO:0042406: extrinsic component of endoplasmic reticulum membrane1.68E-04
2GO:0009509: chromoplast1.68E-04
3GO:0009507: chloroplast5.03E-04
4GO:0031359: integral component of chloroplast outer membrane7.28E-04
5GO:0043231: intracellular membrane-bounded organelle9.27E-04
6GO:0046930: pore complex9.50E-04
7GO:0009536: plastid9.62E-04
8GO:0005764: lysosome1.86E-03
9GO:0005905: clathrin-coated pit2.64E-03
10GO:0030136: clathrin-coated vesicle3.32E-03
11GO:0071944: cell periphery4.65E-03
12GO:0010319: stromule5.05E-03
13GO:0009941: chloroplast envelope7.33E-03
14GO:0009706: chloroplast inner membrane1.46E-02
15GO:0005737: cytoplasm1.64E-02
16GO:0009705: plant-type vacuole membrane2.16E-02
17GO:0005743: mitochondrial inner membrane4.30E-02
18GO:0005783: endoplasmic reticulum4.69E-02
Gene type



Gene DE type