GO Enrichment Analysis of Co-expressed Genes with
AT4G30660
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 2 | GO:1903508: positive regulation of nucleic acid-templated transcription | 0.00E+00 |
| 3 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 4 | GO:1903428: positive regulation of reactive oxygen species biosynthetic process | 0.00E+00 |
| 5 | GO:0070584: mitochondrion morphogenesis | 0.00E+00 |
| 6 | GO:0010378: temperature compensation of the circadian clock | 0.00E+00 |
| 7 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.86E-27 |
| 8 | GO:0015979: photosynthesis | 6.01E-19 |
| 9 | GO:0018298: protein-chromophore linkage | 5.38E-18 |
| 10 | GO:0009645: response to low light intensity stimulus | 1.56E-12 |
| 11 | GO:0010218: response to far red light | 1.16E-11 |
| 12 | GO:0009769: photosynthesis, light harvesting in photosystem II | 6.90E-10 |
| 13 | GO:0009637: response to blue light | 1.44E-09 |
| 14 | GO:0010114: response to red light | 3.33E-09 |
| 15 | GO:0009644: response to high light intensity | 4.30E-09 |
| 16 | GO:0009416: response to light stimulus | 1.42E-06 |
| 17 | GO:0009409: response to cold | 3.79E-06 |
| 18 | GO:0009765: photosynthesis, light harvesting | 6.24E-06 |
| 19 | GO:0080167: response to karrikin | 2.11E-05 |
| 20 | GO:0010196: nonphotochemical quenching | 3.11E-05 |
| 21 | GO:0007623: circadian rhythm | 7.51E-05 |
| 22 | GO:0051262: protein tetramerization | 1.93E-04 |
| 23 | GO:0051170: nuclear import | 1.93E-04 |
| 24 | GO:0048511: rhythmic process | 2.94E-04 |
| 25 | GO:0009269: response to desiccation | 2.94E-04 |
| 26 | GO:0010017: red or far-red light signaling pathway | 3.23E-04 |
| 27 | GO:1902448: positive regulation of shade avoidance | 3.24E-04 |
| 28 | GO:0006598: polyamine catabolic process | 3.24E-04 |
| 29 | GO:0031936: negative regulation of chromatin silencing | 4.66E-04 |
| 30 | GO:0050482: arachidonic acid secretion | 4.66E-04 |
| 31 | GO:0030104: water homeostasis | 6.21E-04 |
| 32 | GO:2000306: positive regulation of photomorphogenesis | 6.21E-04 |
| 33 | GO:0010600: regulation of auxin biosynthetic process | 6.21E-04 |
| 34 | GO:1901657: glycosyl compound metabolic process | 6.71E-04 |
| 35 | GO:0048578: positive regulation of long-day photoperiodism, flowering | 7.86E-04 |
| 36 | GO:0009635: response to herbicide | 9.59E-04 |
| 37 | GO:0045962: positive regulation of development, heterochronic | 9.59E-04 |
| 38 | GO:0015995: chlorophyll biosynthetic process | 9.86E-04 |
| 39 | GO:0000160: phosphorelay signal transduction system | 1.14E-03 |
| 40 | GO:0071470: cellular response to osmotic stress | 1.14E-03 |
| 41 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.14E-03 |
| 42 | GO:0010161: red light signaling pathway | 1.34E-03 |
| 43 | GO:0080111: DNA demethylation | 1.34E-03 |
| 44 | GO:0009704: de-etiolation | 1.54E-03 |
| 45 | GO:0006644: phospholipid metabolic process | 1.54E-03 |
| 46 | GO:0010928: regulation of auxin mediated signaling pathway | 1.54E-03 |
| 47 | GO:0042542: response to hydrogen peroxide | 1.68E-03 |
| 48 | GO:0009640: photomorphogenesis | 1.74E-03 |
| 49 | GO:0010099: regulation of photomorphogenesis | 1.76E-03 |
| 50 | GO:0007186: G-protein coupled receptor signaling pathway | 1.76E-03 |
| 51 | GO:0090333: regulation of stomatal closure | 1.98E-03 |
| 52 | GO:1900865: chloroplast RNA modification | 2.22E-03 |
| 53 | GO:0009585: red, far-red light phototransduction | 2.34E-03 |
| 54 | GO:0009641: shade avoidance | 2.46E-03 |
| 55 | GO:0010162: seed dormancy process | 2.46E-03 |
| 56 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.71E-03 |
| 57 | GO:0005983: starch catabolic process | 2.97E-03 |
| 58 | GO:0009718: anthocyanin-containing compound biosynthetic process | 3.24E-03 |
| 59 | GO:0009767: photosynthetic electron transport chain | 3.24E-03 |
| 60 | GO:0010207: photosystem II assembly | 3.52E-03 |
| 61 | GO:0009266: response to temperature stimulus | 3.52E-03 |
| 62 | GO:0090351: seedling development | 3.81E-03 |
| 63 | GO:0006874: cellular calcium ion homeostasis | 4.70E-03 |
| 64 | GO:0009735: response to cytokinin | 4.99E-03 |
| 65 | GO:0061077: chaperone-mediated protein folding | 5.02E-03 |
| 66 | GO:0006810: transport | 5.41E-03 |
| 67 | GO:0071215: cellular response to abscisic acid stimulus | 5.67E-03 |
| 68 | GO:0045492: xylan biosynthetic process | 6.01E-03 |
| 69 | GO:0006351: transcription, DNA-templated | 6.49E-03 |
| 70 | GO:0006814: sodium ion transport | 7.42E-03 |
| 71 | GO:0042752: regulation of circadian rhythm | 7.42E-03 |
| 72 | GO:0000302: response to reactive oxygen species | 8.17E-03 |
| 73 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 8.17E-03 |
| 74 | GO:0006355: regulation of transcription, DNA-templated | 9.50E-03 |
| 75 | GO:0016579: protein deubiquitination | 1.02E-02 |
| 76 | GO:0016126: sterol biosynthetic process | 1.06E-02 |
| 77 | GO:0010029: regulation of seed germination | 1.10E-02 |
| 78 | GO:0048573: photoperiodism, flowering | 1.19E-02 |
| 79 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.19E-02 |
| 80 | GO:0045892: negative regulation of transcription, DNA-templated | 1.33E-02 |
| 81 | GO:0006811: ion transport | 1.37E-02 |
| 82 | GO:0010119: regulation of stomatal movement | 1.41E-02 |
| 83 | GO:0009631: cold acclimation | 1.41E-02 |
| 84 | GO:0016051: carbohydrate biosynthetic process | 1.51E-02 |
| 85 | GO:0032259: methylation | 1.55E-02 |
| 86 | GO:0034599: cellular response to oxidative stress | 1.56E-02 |
| 87 | GO:0006839: mitochondrial transport | 1.65E-02 |
| 88 | GO:0051707: response to other organism | 1.80E-02 |
| 89 | GO:0009965: leaf morphogenesis | 1.96E-02 |
| 90 | GO:0006812: cation transport | 2.12E-02 |
| 91 | GO:0043086: negative regulation of catalytic activity | 2.51E-02 |
| 92 | GO:0009908: flower development | 2.60E-02 |
| 93 | GO:0009624: response to nematode | 2.87E-02 |
| 94 | GO:0009611: response to wounding | 2.93E-02 |
| 95 | GO:0009845: seed germination | 3.56E-02 |
| 96 | GO:0055085: transmembrane transport | 3.64E-02 |
| 97 | GO:0010228: vegetative to reproductive phase transition of meristem | 4.37E-02 |
| 98 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.58E-02 |
| 99 | GO:0008380: RNA splicing | 4.80E-02 |
| 100 | GO:0010468: regulation of gene expression | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080082: esculin beta-glucosidase activity | 0.00E+00 |
| 2 | GO:0015038: glutathione disulfide oxidoreductase activity | 0.00E+00 |
| 3 | GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity | 0.00E+00 |
| 4 | GO:0047668: amygdalin beta-glucosidase activity | 0.00E+00 |
| 5 | GO:0080083: beta-gentiobiose beta-glucosidase activity | 0.00E+00 |
| 6 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 7 | GO:0090711: FMN hydrolase activity | 0.00E+00 |
| 8 | GO:0004567: beta-mannosidase activity | 0.00E+00 |
| 9 | GO:0031409: pigment binding | 5.30E-25 |
| 10 | GO:0016168: chlorophyll binding | 9.56E-21 |
| 11 | GO:0005227: calcium activated cation channel activity | 8.09E-05 |
| 12 | GO:0080079: cellobiose glucosidase activity | 8.09E-05 |
| 13 | GO:0016630: protochlorophyllide reductase activity | 1.93E-04 |
| 14 | GO:0046872: metal ion binding | 2.62E-04 |
| 15 | GO:0046592: polyamine oxidase activity | 3.24E-04 |
| 16 | GO:0004506: squalene monooxygenase activity | 6.21E-04 |
| 17 | GO:0004930: G-protein coupled receptor activity | 6.21E-04 |
| 18 | GO:0000156: phosphorelay response regulator activity | 6.71E-04 |
| 19 | GO:0004623: phospholipase A2 activity | 7.86E-04 |
| 20 | GO:0004556: alpha-amylase activity | 9.59E-04 |
| 21 | GO:0102483: scopolin beta-glucosidase activity | 9.86E-04 |
| 22 | GO:0005261: cation channel activity | 1.14E-03 |
| 23 | GO:0008422: beta-glucosidase activity | 1.48E-03 |
| 24 | GO:0004564: beta-fructofuranosidase activity | 1.54E-03 |
| 25 | GO:0000989: transcription factor activity, transcription factor binding | 1.98E-03 |
| 26 | GO:0005515: protein binding | 2.18E-03 |
| 27 | GO:0004575: sucrose alpha-glucosidase activity | 2.22E-03 |
| 28 | GO:0016787: hydrolase activity | 2.43E-03 |
| 29 | GO:0044183: protein binding involved in protein folding | 2.71E-03 |
| 30 | GO:0047372: acylglycerol lipase activity | 2.71E-03 |
| 31 | GO:0004022: alcohol dehydrogenase (NAD) activity | 3.24E-03 |
| 32 | GO:0005315: inorganic phosphate transmembrane transporter activity | 3.24E-03 |
| 33 | GO:0008131: primary amine oxidase activity | 3.52E-03 |
| 34 | GO:0005215: transporter activity | 3.52E-03 |
| 35 | GO:0003712: transcription cofactor activity | 3.81E-03 |
| 36 | GO:0004970: ionotropic glutamate receptor activity | 3.81E-03 |
| 37 | GO:0005217: intracellular ligand-gated ion channel activity | 3.81E-03 |
| 38 | GO:0005216: ion channel activity | 4.70E-03 |
| 39 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 5.02E-03 |
| 40 | GO:0004707: MAP kinase activity | 5.02E-03 |
| 41 | GO:0008514: organic anion transmembrane transporter activity | 6.01E-03 |
| 42 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 8.17E-03 |
| 43 | GO:0008168: methyltransferase activity | 8.47E-03 |
| 44 | GO:0008375: acetylglucosaminyltransferase activity | 1.14E-02 |
| 45 | GO:0005509: calcium ion binding | 1.24E-02 |
| 46 | GO:0003993: acid phosphatase activity | 1.56E-02 |
| 47 | GO:0042393: histone binding | 1.65E-02 |
| 48 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.91E-02 |
| 49 | GO:0043621: protein self-association | 1.91E-02 |
| 50 | GO:0015293: symporter activity | 1.96E-02 |
| 51 | GO:0005198: structural molecule activity | 1.96E-02 |
| 52 | GO:0015035: protein disulfide oxidoreductase activity | 2.93E-02 |
| 53 | GO:0008270: zinc ion binding | 2.95E-02 |
| 54 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.43E-02 |
| 55 | GO:0004252: serine-type endopeptidase activity | 3.62E-02 |
| 56 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.78E-02 |
| 57 | GO:0015144: carbohydrate transmembrane transporter activity | 3.82E-02 |
| 58 | GO:0046910: pectinesterase inhibitor activity | 4.02E-02 |
| 59 | GO:0015297: antiporter activity | 4.09E-02 |
| 60 | GO:0005351: sugar:proton symporter activity | 4.16E-02 |
| 61 | GO:0003677: DNA binding | 4.39E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009783: photosystem II antenna complex | 0.00E+00 |
| 2 | GO:0009522: photosystem I | 2.47E-22 |
| 3 | GO:0030076: light-harvesting complex | 5.67E-20 |
| 4 | GO:0009579: thylakoid | 5.27E-19 |
| 5 | GO:0009534: chloroplast thylakoid | 5.71E-19 |
| 6 | GO:0010287: plastoglobule | 1.16E-18 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 3.17E-17 |
| 8 | GO:0009941: chloroplast envelope | 1.63E-14 |
| 9 | GO:0009523: photosystem II | 6.01E-11 |
| 10 | GO:0009517: PSII associated light-harvesting complex II | 1.51E-08 |
| 11 | GO:0009507: chloroplast | 5.53E-08 |
| 12 | GO:0042651: thylakoid membrane | 7.07E-06 |
| 13 | GO:0009538: photosystem I reaction center | 4.08E-05 |
| 14 | GO:0016021: integral component of membrane | 6.27E-05 |
| 15 | GO:0016020: membrane | 1.29E-04 |
| 16 | GO:0030127: COPII vesicle coat | 9.59E-04 |
| 17 | GO:0009533: chloroplast stromal thylakoid | 1.34E-03 |
| 18 | GO:0010494: cytoplasmic stress granule | 1.98E-03 |
| 19 | GO:0030095: chloroplast photosystem II | 3.52E-03 |
| 20 | GO:0009654: photosystem II oxygen evolving complex | 4.70E-03 |
| 21 | GO:0031410: cytoplasmic vesicle | 5.34E-03 |
| 22 | GO:0019898: extrinsic component of membrane | 7.79E-03 |
| 23 | GO:0000932: P-body | 1.06E-02 |
| 24 | GO:0009707: chloroplast outer membrane | 1.27E-02 |
| 25 | GO:0031977: thylakoid lumen | 1.70E-02 |
| 26 | GO:0031966: mitochondrial membrane | 2.12E-02 |
| 27 | GO:0016607: nuclear speck | 2.57E-02 |
| 28 | GO:0005777: peroxisome | 3.29E-02 |
| 29 | GO:0005654: nucleoplasm | 3.30E-02 |
| 30 | GO:0009543: chloroplast thylakoid lumen | 3.36E-02 |
| 31 | GO:0005623: cell | 3.43E-02 |
| 32 | GO:0009570: chloroplast stroma | 5.00E-02 |