Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G30490

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048034: heme O biosynthetic process0.00E+00
2GO:0006793: phosphorus metabolic process0.00E+00
3GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
4GO:0072722: response to amitrole0.00E+00
5GO:0042430: indole-containing compound metabolic process0.00E+00
6GO:0002376: immune system process0.00E+00
7GO:0055091: phospholipid homeostasis0.00E+00
8GO:0070212: protein poly-ADP-ribosylation0.00E+00
9GO:0070328: triglyceride homeostasis0.00E+00
10GO:0045792: negative regulation of cell size0.00E+00
11GO:0030149: sphingolipid catabolic process0.00E+00
12GO:0009398: FMN biosynthetic process0.00E+00
13GO:0010200: response to chitin3.51E-10
14GO:0009617: response to bacterium5.03E-10
15GO:0009626: plant-type hypersensitive response6.07E-09
16GO:0042742: defense response to bacterium1.55E-06
17GO:0010193: response to ozone1.89E-05
18GO:0060548: negative regulation of cell death4.69E-05
19GO:0002237: response to molecule of bacterial origin4.92E-05
20GO:0070370: cellular heat acclimation1.96E-04
21GO:0033306: phytol metabolic process2.63E-04
22GO:0009962: regulation of flavonoid biosynthetic process2.63E-04
23GO:1900424: regulation of defense response to bacterium2.63E-04
24GO:0080093: regulation of photorespiration2.63E-04
25GO:0031998: regulation of fatty acid beta-oxidation2.63E-04
26GO:0015760: glucose-6-phosphate transport2.63E-04
27GO:0003400: regulation of COPII vesicle coating2.63E-04
28GO:1902478: negative regulation of defense response to bacterium, incompatible interaction2.63E-04
29GO:0009270: response to humidity2.63E-04
30GO:0006032: chitin catabolic process5.12E-04
31GO:0019752: carboxylic acid metabolic process5.78E-04
32GO:0046475: glycerophospholipid catabolic process5.78E-04
33GO:1902000: homogentisate catabolic process5.78E-04
34GO:0044419: interspecies interaction between organisms5.78E-04
35GO:0019725: cellular homeostasis5.78E-04
36GO:0015712: hexose phosphate transport5.78E-04
37GO:0097054: L-glutamate biosynthetic process5.78E-04
38GO:0051592: response to calcium ion5.78E-04
39GO:0031648: protein destabilization5.78E-04
40GO:0051262: protein tetramerization5.78E-04
41GO:0055088: lipid homeostasis5.78E-04
42GO:0000272: polysaccharide catabolic process5.92E-04
43GO:0080167: response to karrikin6.24E-04
44GO:0008219: cell death6.87E-04
45GO:0009407: toxin catabolic process7.76E-04
46GO:0034605: cellular response to heat8.62E-04
47GO:0034051: negative regulation of plant-type hypersensitive response9.39E-04
48GO:1900140: regulation of seedling development9.39E-04
49GO:0010581: regulation of starch biosynthetic process9.39E-04
50GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway9.39E-04
51GO:0035436: triose phosphate transmembrane transport9.39E-04
52GO:0045793: positive regulation of cell size9.39E-04
53GO:0010351: lithium ion transport9.39E-04
54GO:0010186: positive regulation of cellular defense response9.39E-04
55GO:0009410: response to xenobiotic stimulus9.39E-04
56GO:0010447: response to acidic pH9.39E-04
57GO:0010272: response to silver ion9.39E-04
58GO:0009072: aromatic amino acid family metabolic process9.39E-04
59GO:0015714: phosphoenolpyruvate transport9.39E-04
60GO:0048281: inflorescence morphogenesis9.39E-04
61GO:0006099: tricarboxylic acid cycle9.75E-04
62GO:0006952: defense response1.09E-03
63GO:0009863: salicylic acid mediated signaling pathway1.18E-03
64GO:0009695: jasmonic acid biosynthetic process1.30E-03
65GO:0080024: indolebutyric acid metabolic process1.34E-03
66GO:0002679: respiratory burst involved in defense response1.34E-03
67GO:0006882: cellular zinc ion homeostasis1.34E-03
68GO:0001676: long-chain fatty acid metabolic process1.34E-03
69GO:0046836: glycolipid transport1.34E-03
70GO:0055089: fatty acid homeostasis1.34E-03
71GO:0048194: Golgi vesicle budding1.34E-03
72GO:0006537: glutamate biosynthetic process1.34E-03
73GO:0016998: cell wall macromolecule catabolic process1.43E-03
74GO:0031408: oxylipin biosynthetic process1.43E-03
75GO:0031348: negative regulation of defense response1.56E-03
76GO:0010508: positive regulation of autophagy1.79E-03
77GO:0015713: phosphoglycerate transport1.79E-03
78GO:0034440: lipid oxidation1.79E-03
79GO:0015867: ATP transport1.79E-03
80GO:0080037: negative regulation of cytokinin-activated signaling pathway1.79E-03
81GO:0010109: regulation of photosynthesis1.79E-03
82GO:0019676: ammonia assimilation cycle1.79E-03
83GO:0048638: regulation of developmental growth1.79E-03
84GO:0045727: positive regulation of translation1.79E-03
85GO:0006817: phosphate ion transport1.84E-03
86GO:2000762: regulation of phenylpropanoid metabolic process2.29E-03
87GO:0034052: positive regulation of plant-type hypersensitive response2.29E-03
88GO:0045487: gibberellin catabolic process2.29E-03
89GO:0006097: glyoxylate cycle2.29E-03
90GO:0009697: salicylic acid biosynthetic process2.29E-03
91GO:0009749: response to glucose2.68E-03
92GO:0046686: response to cadmium ion2.74E-03
93GO:0010337: regulation of salicylic acid metabolic process2.82E-03
94GO:0009117: nucleotide metabolic process2.82E-03
95GO:0009228: thiamine biosynthetic process2.82E-03
96GO:0009643: photosynthetic acclimation2.82E-03
97GO:0050665: hydrogen peroxide biosynthetic process2.82E-03
98GO:0006121: mitochondrial electron transport, succinate to ubiquinone2.82E-03
99GO:0015866: ADP transport2.82E-03
100GO:0009624: response to nematode2.88E-03
101GO:0009094: L-phenylalanine biosynthetic process3.40E-03
102GO:0009554: megasporogenesis3.40E-03
103GO:0009854: oxidative photosynthetic carbon pathway3.40E-03
104GO:0010555: response to mannitol3.40E-03
105GO:0080086: stamen filament development3.40E-03
106GO:2000067: regulation of root morphogenesis3.40E-03
107GO:0015977: carbon fixation3.40E-03
108GO:0030643: cellular phosphate ion homeostasis3.40E-03
109GO:0006979: response to oxidative stress3.58E-03
110GO:1900057: positive regulation of leaf senescence4.00E-03
111GO:0010044: response to aluminum ion4.00E-03
112GO:0006955: immune response4.00E-03
113GO:0030026: cellular manganese ion homeostasis4.00E-03
114GO:0009615: response to virus4.14E-03
115GO:0009816: defense response to bacterium, incompatible interaction4.37E-03
116GO:0009627: systemic acquired resistance4.61E-03
117GO:0030162: regulation of proteolysis4.65E-03
118GO:0009231: riboflavin biosynthetic process4.65E-03
119GO:0009408: response to heat5.28E-03
120GO:0007186: G-protein coupled receptor signaling pathway5.32E-03
121GO:0010497: plasmodesmata-mediated intercellular transport5.32E-03
122GO:0010204: defense response signaling pathway, resistance gene-independent5.32E-03
123GO:0030968: endoplasmic reticulum unfolded protein response5.32E-03
124GO:0010262: somatic embryogenesis5.32E-03
125GO:0010120: camalexin biosynthetic process5.32E-03
126GO:0019432: triglyceride biosynthetic process6.03E-03
127GO:0006783: heme biosynthetic process6.03E-03
128GO:0010112: regulation of systemic acquired resistance6.03E-03
129GO:0046685: response to arsenic-containing substance6.03E-03
130GO:0051865: protein autoubiquitination6.03E-03
131GO:0009409: response to cold6.39E-03
132GO:2000280: regulation of root development6.77E-03
133GO:0030042: actin filament depolymerization6.77E-03
134GO:0016310: phosphorylation7.33E-03
135GO:0009870: defense response signaling pathway, resistance gene-dependent7.54E-03
136GO:0055062: phosphate ion homeostasis7.54E-03
137GO:0009299: mRNA transcription7.54E-03
138GO:0007064: mitotic sister chromatid cohesion7.54E-03
139GO:0015770: sucrose transport8.35E-03
140GO:0009750: response to fructose8.35E-03
141GO:0048229: gametophyte development8.35E-03
142GO:0006816: calcium ion transport8.35E-03
143GO:0009698: phenylpropanoid metabolic process8.35E-03
144GO:0009744: response to sucrose8.82E-03
145GO:0006890: retrograde vesicle-mediated transport, Golgi to ER9.17E-03
146GO:0015706: nitrate transport9.17E-03
147GO:0006820: anion transport9.17E-03
148GO:0009636: response to toxic substance9.92E-03
149GO:0006108: malate metabolic process1.00E-02
150GO:0009266: response to temperature stimulus1.09E-02
151GO:0010167: response to nitrate1.18E-02
152GO:0009901: anther dehiscence1.18E-02
153GO:0090351: seedling development1.18E-02
154GO:0070588: calcium ion transmembrane transport1.18E-02
155GO:0046854: phosphatidylinositol phosphorylation1.18E-02
156GO:0042343: indole glucosinolate metabolic process1.18E-02
157GO:0046688: response to copper ion1.18E-02
158GO:0010224: response to UV-B1.23E-02
159GO:0009833: plant-type primary cell wall biogenesis1.28E-02
160GO:0006071: glycerol metabolic process1.28E-02
161GO:0000162: tryptophan biosynthetic process1.28E-02
162GO:0009611: response to wounding1.30E-02
163GO:0000027: ribosomal large subunit assembly1.38E-02
164GO:0045333: cellular respiration1.38E-02
165GO:0009651: response to salt stress1.43E-02
166GO:0044550: secondary metabolite biosynthetic process1.48E-02
167GO:0006825: copper ion transport1.48E-02
168GO:0006874: cellular calcium ion homeostasis1.48E-02
169GO:0098542: defense response to other organism1.58E-02
170GO:0006468: protein phosphorylation1.61E-02
171GO:0035428: hexose transmembrane transport1.68E-02
172GO:0009814: defense response, incompatible interaction1.68E-02
173GO:0016226: iron-sulfur cluster assembly1.68E-02
174GO:0009686: gibberellin biosynthetic process1.79E-02
175GO:0009411: response to UV1.79E-02
176GO:0040007: growth1.79E-02
177GO:0055085: transmembrane transport1.81E-02
178GO:0019722: calcium-mediated signaling1.90E-02
179GO:0009306: protein secretion1.90E-02
180GO:0010091: trichome branching1.90E-02
181GO:0006511: ubiquitin-dependent protein catabolic process2.00E-02
182GO:0000271: polysaccharide biosynthetic process2.13E-02
183GO:0042391: regulation of membrane potential2.13E-02
184GO:0048653: anther development2.13E-02
185GO:0009751: response to salicylic acid2.13E-02
186GO:0046323: glucose import2.24E-02
187GO:0006520: cellular amino acid metabolic process2.24E-02
188GO:0006814: sodium ion transport2.36E-02
189GO:0008654: phospholipid biosynthetic process2.48E-02
190GO:0010183: pollen tube guidance2.48E-02
191GO:0006635: fatty acid beta-oxidation2.61E-02
192GO:0032502: developmental process2.73E-02
193GO:0016036: cellular response to phosphate starvation2.74E-02
194GO:1901657: glycosyl compound metabolic process2.86E-02
195GO:0030163: protein catabolic process2.86E-02
196GO:0010150: leaf senescence2.94E-02
197GO:0009639: response to red or far red light2.99E-02
198GO:0006904: vesicle docking involved in exocytosis3.12E-02
199GO:0051607: defense response to virus3.25E-02
200GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.29E-02
201GO:0007166: cell surface receptor signaling pathway3.36E-02
202GO:0001666: response to hypoxia3.39E-02
203GO:0042128: nitrate assimilation3.66E-02
204GO:0006888: ER to Golgi vesicle-mediated transport3.80E-02
205GO:0006950: response to stress3.80E-02
206GO:0006351: transcription, DNA-templated3.92E-02
207GO:0016311: dephosphorylation3.95E-02
208GO:0007165: signal transduction3.99E-02
209GO:0030244: cellulose biosynthetic process4.09E-02
210GO:0006811: ion transport4.38E-02
211GO:0010043: response to zinc ion4.53E-02
212GO:0048527: lateral root development4.53E-02
213GO:0045087: innate immune response4.84E-02
214GO:0006970: response to osmotic stress4.88E-02
RankGO TermAdjusted P value
1GO:0042171: lysophosphatidic acid acyltransferase activity0.00E+00
2GO:0008495: protoheme IX farnesyltransferase activity0.00E+00
3GO:0016034: maleylacetoacetate isomerase activity0.00E+00
4GO:0008531: riboflavin kinase activity0.00E+00
5GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
6GO:0015930: glutamate synthase activity0.00E+00
7GO:0004048: anthranilate phosphoribosyltransferase activity2.63E-04
8GO:0004321: fatty-acyl-CoA synthase activity2.63E-04
9GO:0016041: glutamate synthase (ferredoxin) activity2.63E-04
10GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity2.63E-04
11GO:0005090: Sar guanyl-nucleotide exchange factor activity2.63E-04
12GO:0080042: ADP-glucose pyrophosphohydrolase activity2.63E-04
13GO:0004568: chitinase activity5.12E-04
14GO:0004338: glucan exo-1,3-beta-glucosidase activity5.78E-04
15GO:0004385: guanylate kinase activity5.78E-04
16GO:0045543: gibberellin 2-beta-dioxygenase activity5.78E-04
17GO:0080041: ADP-ribose pyrophosphohydrolase activity5.78E-04
18GO:0003958: NADPH-hemoprotein reductase activity5.78E-04
19GO:0015152: glucose-6-phosphate transmembrane transporter activity5.78E-04
20GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity5.78E-04
21GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity5.78E-04
22GO:0017110: nucleoside-diphosphatase activity5.78E-04
23GO:0003919: FMN adenylyltransferase activity5.78E-04
24GO:0019172: glyoxalase III activity5.78E-04
25GO:0005315: inorganic phosphate transmembrane transporter activity7.67E-04
26GO:0005388: calcium-transporting ATPase activity7.67E-04
27GO:0005524: ATP binding9.06E-04
28GO:0031683: G-protein beta/gamma-subunit complex binding9.39E-04
29GO:0008964: phosphoenolpyruvate carboxylase activity9.39E-04
30GO:0016165: linoleate 13S-lipoxygenase activity9.39E-04
31GO:0071917: triose-phosphate transmembrane transporter activity9.39E-04
32GO:0001664: G-protein coupled receptor binding9.39E-04
33GO:0016531: copper chaperone activity9.39E-04
34GO:0008061: chitin binding9.62E-04
35GO:0004725: protein tyrosine phosphatase activity1.07E-03
36GO:0004364: glutathione transferase activity1.20E-03
37GO:0004108: citrate (Si)-synthase activity1.34E-03
38GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity1.34E-03
39GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity1.34E-03
40GO:0017089: glycolipid transporter activity1.34E-03
41GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity1.34E-03
42GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity1.34E-03
43GO:0022891: substrate-specific transmembrane transporter activity1.70E-03
44GO:0008891: glycolate oxidase activity1.79E-03
45GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity1.79E-03
46GO:0015120: phosphoglycerate transmembrane transporter activity1.79E-03
47GO:0004659: prenyltransferase activity1.79E-03
48GO:0015368: calcium:cation antiporter activity1.79E-03
49GO:0047769: arogenate dehydratase activity1.79E-03
50GO:0004664: prephenate dehydratase activity1.79E-03
51GO:0051861: glycolipid binding1.79E-03
52GO:0015369: calcium:proton antiporter activity1.79E-03
53GO:0004623: phospholipase A2 activity2.29E-03
54GO:0000104: succinate dehydrogenase activity2.29E-03
55GO:0047631: ADP-ribose diphosphatase activity2.29E-03
56GO:0051538: 3 iron, 4 sulfur cluster binding2.29E-03
57GO:0015145: monosaccharide transmembrane transporter activity2.29E-03
58GO:0010181: FMN binding2.50E-03
59GO:0016615: malate dehydrogenase activity2.82E-03
60GO:0030976: thiamine pyrophosphate binding2.82E-03
61GO:0008420: CTD phosphatase activity2.82E-03
62GO:0000210: NAD+ diphosphatase activity2.82E-03
63GO:0102391: decanoate--CoA ligase activity3.40E-03
64GO:0004012: phospholipid-translocating ATPase activity3.40E-03
65GO:0004144: diacylglycerol O-acyltransferase activity3.40E-03
66GO:0005347: ATP transmembrane transporter activity3.40E-03
67GO:0030060: L-malate dehydrogenase activity3.40E-03
68GO:0051020: GTPase binding3.40E-03
69GO:0015217: ADP transmembrane transporter activity3.40E-03
70GO:0004467: long-chain fatty acid-CoA ligase activity4.00E-03
71GO:0016831: carboxy-lyase activity4.00E-03
72GO:0008506: sucrose:proton symporter activity4.00E-03
73GO:0005544: calcium-dependent phospholipid binding4.65E-03
74GO:0004311: farnesyltranstransferase activity4.65E-03
75GO:0015491: cation:cation antiporter activity4.65E-03
76GO:0004714: transmembrane receptor protein tyrosine kinase activity4.65E-03
77GO:0015288: porin activity4.65E-03
78GO:0004721: phosphoprotein phosphatase activity4.87E-03
79GO:0004430: 1-phosphatidylinositol 4-kinase activity5.32E-03
80GO:0008308: voltage-gated anion channel activity5.32E-03
81GO:0015297: antiporter activity5.45E-03
82GO:0043565: sequence-specific DNA binding5.76E-03
83GO:0016301: kinase activity5.83E-03
84GO:0016207: 4-coumarate-CoA ligase activity6.03E-03
85GO:0008889: glycerophosphodiester phosphodiesterase activity6.03E-03
86GO:0015112: nitrate transmembrane transporter activity6.77E-03
87GO:0015020: glucuronosyltransferase activity7.54E-03
88GO:0042802: identical protein binding7.85E-03
89GO:0000287: magnesium ion binding9.84E-03
90GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.00E-02
91GO:0005262: calcium channel activity1.00E-02
92GO:0015114: phosphate ion transmembrane transporter activity1.00E-02
93GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.09E-02
94GO:0043531: ADP binding1.13E-02
95GO:0005515: protein binding1.14E-02
96GO:0004190: aspartic-type endopeptidase activity1.18E-02
97GO:0030552: cAMP binding1.18E-02
98GO:0030553: cGMP binding1.18E-02
99GO:0004674: protein serine/threonine kinase activity1.31E-02
100GO:0005215: transporter activity1.38E-02
101GO:0005216: ion channel activity1.48E-02
102GO:0080043: quercetin 3-O-glucosyltransferase activity1.55E-02
103GO:0080044: quercetin 7-O-glucosyltransferase activity1.55E-02
104GO:0033612: receptor serine/threonine kinase binding1.58E-02
105GO:0004298: threonine-type endopeptidase activity1.58E-02
106GO:0004871: signal transducer activity1.77E-02
107GO:0016760: cellulose synthase (UDP-forming) activity1.79E-02
108GO:0008810: cellulase activity1.79E-02
109GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.84E-02
110GO:0016758: transferase activity, transferring hexosyl groups2.07E-02
111GO:0005249: voltage-gated potassium channel activity2.13E-02
112GO:0030551: cyclic nucleotide binding2.13E-02
113GO:0005355: glucose transmembrane transporter activity2.36E-02
114GO:0015144: carbohydrate transmembrane transporter activity2.55E-02
115GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.74E-02
116GO:0005351: sugar:proton symporter activity2.88E-02
117GO:0016791: phosphatase activity2.99E-02
118GO:0016759: cellulose synthase activity2.99E-02
119GO:0008237: metallopeptidase activity3.12E-02
120GO:0005509: calcium ion binding3.19E-02
121GO:0016597: amino acid binding3.25E-02
122GO:0008194: UDP-glycosyltransferase activity3.29E-02
123GO:0003700: transcription factor activity, sequence-specific DNA binding3.61E-02
124GO:0016757: transferase activity, transferring glycosyl groups3.69E-02
125GO:0030247: polysaccharide binding3.80E-02
126GO:0102483: scopolin beta-glucosidase activity3.80E-02
127GO:0015238: drug transmembrane transporter activity4.24E-02
128GO:0005096: GTPase activator activity4.24E-02
129GO:0004222: metalloendopeptidase activity4.38E-02
130GO:0030145: manganese ion binding4.53E-02
131GO:0050897: cobalt ion binding4.53E-02
132GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.53E-02
133GO:0000987: core promoter proximal region sequence-specific DNA binding4.99E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.33E-05
2GO:0031351: integral component of plastid membrane2.63E-04
3GO:0005758: mitochondrial intermembrane space1.18E-03
4GO:0005741: mitochondrial outer membrane1.43E-03
5GO:0005777: peroxisome4.30E-03
6GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)4.65E-03
7GO:0005783: endoplasmic reticulum5.26E-03
8GO:0046930: pore complex5.32E-03
9GO:0019773: proteasome core complex, alpha-subunit complex5.32E-03
10GO:0005779: integral component of peroxisomal membrane5.32E-03
11GO:0005740: mitochondrial envelope7.54E-03
12GO:0008541: proteasome regulatory particle, lid subcomplex8.35E-03
13GO:0005887: integral component of plasma membrane8.41E-03
14GO:0031012: extracellular matrix1.00E-02
15GO:0030176: integral component of endoplasmic reticulum membrane1.18E-02
16GO:0000502: proteasome complex1.19E-02
17GO:0005834: heterotrimeric G-protein complex1.50E-02
18GO:0005839: proteasome core complex1.58E-02
19GO:0015629: actin cytoskeleton1.79E-02
20GO:0005618: cell wall2.02E-02
21GO:0005829: cytosol2.65E-02
22GO:0000145: exocyst2.73E-02
23GO:0005774: vacuolar membrane3.81E-02
24GO:0046658: anchored component of plasma membrane3.89E-02
25GO:0019005: SCF ubiquitin ligase complex4.09E-02
26GO:0048046: apoplast4.16E-02
27GO:0022626: cytosolic ribosome4.19E-02
28GO:0009536: plastid4.81E-02
29GO:0016021: integral component of membrane4.90E-02
Gene type



Gene DE type