co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G30470

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015822: ornithine transport	0.00E+00
2	GO:0009715: chalcone biosynthetic process	0.00E+00
3	GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene	0.00E+00
4	GO:1901038: cyanidin 3-O-glucoside metabolic process	0.00E+00
5	GO:0010423: negative regulation of brassinosteroid biosynthetic process	0.00E+00
6	GO:0009264: deoxyribonucleotide catabolic process	0.00E+00
7	GO:0080167: response to karrikin	6.82E-09
8	GO:0009813: flavonoid biosynthetic process	1.69E-07
9	GO:0071555: cell wall organization	1.39E-05
10	GO:0051555: flavonol biosynthetic process	2.21E-05
11	GO:0009718: anthocyanin-containing compound biosynthetic process	4.38E-05
12	GO:0009733: response to auxin	1.12E-04
13	GO:0010076: maintenance of floral meristem identity	1.58E-04
14	GO:0045489: pectin biosynthetic process	2.43E-04
15	GO:0016119: carotene metabolic process	2.72E-04
16	GO:1901349: glucosinolate transport	2.72E-04
17	GO:1902265: abscisic acid homeostasis	2.72E-04
18	GO:1901537: positive regulation of DNA demethylation	2.72E-04
19	GO:0090449: phloem glucosinolate loading	2.72E-04
20	GO:0050691: regulation of defense response to virus by host	2.72E-04
21	GO:0006659: phosphatidylserine biosynthetic process	2.72E-04
22	GO:0033481: galacturonate biosynthetic process	2.72E-04
23	GO:0048438: floral whorl development	2.72E-04
24	GO:0000066: mitochondrial ornithine transport	2.72E-04
25	GO:0010224: response to UV-B	3.10E-04
26	GO:0009629: response to gravity	5.99E-04
27	GO:0000719: photoreactive repair	5.99E-04
28	GO:0019388: galactose catabolic process	5.99E-04
29	GO:0007154: cell communication	5.99E-04
30	GO:0010220: positive regulation of vernalization response	5.99E-04
31	GO:0080183: response to photooxidative stress	5.99E-04
32	GO:1900386: positive regulation of flavonol biosynthetic process	5.99E-04
33	GO:0071395: cellular response to jasmonic acid stimulus	5.99E-04
34	GO:0009698: phenylpropanoid metabolic process	6.22E-04
35	GO:0000272: polysaccharide catabolic process	6.22E-04
36	GO:0030036: actin cytoskeleton organization	8.06E-04
37	GO:0010218: response to far red light	8.29E-04
38	GO:0031022: nuclear migration along microfilament	9.72E-04
39	GO:1901562: response to paraquat	9.72E-04
40	GO:0010253: UDP-rhamnose biosynthetic process	9.72E-04
41	GO:0040009: regulation of growth rate	9.72E-04
42	GO:0006651: diacylglycerol biosynthetic process	9.72E-04
43	GO:0009637: response to blue light	9.85E-04
44	GO:0009225: nucleotide-sugar metabolic process	1.01E-03
45	GO:0010114: response to red light	1.35E-03
46	GO:0009926: auxin polar transport	1.35E-03
47	GO:0009650: UV protection	1.39E-03
48	GO:0051016: barbed-end actin filament capping	1.39E-03
49	GO:0009963: positive regulation of flavonoid biosynthetic process	1.39E-03
50	GO:0042823: pyridoxal phosphate biosynthetic process	1.39E-03
51	GO:0009590: detection of gravity	1.39E-03
52	GO:1902358: sulfate transmembrane transport	1.39E-03
53	GO:0042546: cell wall biogenesis	1.42E-03
54	GO:0031347: regulation of defense response	1.72E-03
55	GO:0009411: response to UV	1.79E-03
56	GO:0009765: photosynthesis, light harvesting	1.86E-03
57	GO:0006021: inositol biosynthetic process	1.86E-03
58	GO:0009902: chloroplast relocation	1.86E-03
59	GO:0034613: cellular protein localization	1.86E-03
60	GO:0009694: jasmonic acid metabolic process	1.86E-03
61	GO:0048442: sepal development	1.86E-03
62	GO:0016117: carotenoid biosynthetic process	2.10E-03
63	GO:0000271: polysaccharide biosynthetic process	2.27E-03
64	GO:0016094: polyprenol biosynthetic process	2.37E-03
65	GO:0019408: dolichol biosynthetic process	2.37E-03
66	GO:0016120: carotene biosynthetic process	2.37E-03
67	GO:0071368: cellular response to cytokinin stimulus	2.37E-03
68	GO:0016123: xanthophyll biosynthetic process	2.37E-03
69	GO:0009791: post-embryonic development	2.82E-03
70	GO:0042732: D-xylose metabolic process	2.93E-03
71	GO:0010315: auxin efflux	2.93E-03
72	GO:0006559: L-phenylalanine catabolic process	2.93E-03
73	GO:0000060: protein import into nucleus, translocation	2.93E-03
74	GO:0010304: PSII associated light-harvesting complex II catabolic process	2.93E-03
75	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	2.93E-03
76	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.02E-03
77	GO:0010583: response to cyclopentenone	3.22E-03
78	GO:0017148: negative regulation of translation	3.52E-03
79	GO:0009903: chloroplast avoidance movement	3.52E-03
80	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.52E-03
81	GO:0010077: maintenance of inflorescence meristem identity	3.52E-03
82	GO:0050829: defense response to Gram-negative bacterium	4.15E-03
83	GO:0006400: tRNA modification	4.15E-03
84	GO:0051510: regulation of unidimensional cell growth	4.15E-03
85	GO:0030154: cell differentiation	4.63E-03
86	GO:0005978: glycogen biosynthetic process	4.82E-03
87	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.82E-03
88	GO:0045010: actin nucleation	4.82E-03
89	GO:0031540: regulation of anthocyanin biosynthetic process	4.82E-03
90	GO:0052543: callose deposition in cell wall	4.82E-03
91	GO:0007155: cell adhesion	4.82E-03
92	GO:0048573: photoperiodism, flowering	5.13E-03
93	GO:0006633: fatty acid biosynthetic process	5.48E-03
94	GO:0015996: chlorophyll catabolic process	5.52E-03
95	GO:0010099: regulation of photomorphogenesis	5.52E-03
96	GO:0022900: electron transport chain	5.52E-03
97	GO:0009056: catabolic process	6.25E-03
98	GO:0009638: phototropism	7.03E-03
99	GO:0009739: response to gibberellin	7.13E-03
100	GO:0016051: carbohydrate biosynthetic process	7.20E-03
101	GO:0048441: petal development	7.82E-03
102	GO:0043069: negative regulation of programmed cell death	7.82E-03
103	GO:0010192: mucilage biosynthetic process	7.82E-03
104	GO:0048229: gametophyte development	8.66E-03
105	GO:0000038: very long-chain fatty acid metabolic process	8.66E-03
106	GO:0016024: CDP-diacylglycerol biosynthetic process	9.52E-03
107	GO:0010582: floral meristem determinacy	9.52E-03
108	GO:0016925: protein sumoylation	9.52E-03
109	GO:0030048: actin filament-based movement	1.04E-02
110	GO:0006006: glucose metabolic process	1.04E-02
111	GO:0018107: peptidyl-threonine phosphorylation	1.04E-02
112	GO:0010143: cutin biosynthetic process	1.13E-02
113	GO:0048440: carpel development	1.13E-02
114	GO:0002237: response to molecule of bacterial origin	1.13E-02
115	GO:0000165: MAPK cascade	1.13E-02
116	GO:0010223: secondary shoot formation	1.13E-02
117	GO:0010540: basipetal auxin transport	1.13E-02
118	GO:0009934: regulation of meristem structural organization	1.13E-02
119	GO:0048768: root hair cell tip growth	1.13E-02
120	GO:0009585: red, far-red light phototransduction	1.26E-02
121	GO:0009833: plant-type primary cell wall biogenesis	1.33E-02
122	GO:0006833: water transport	1.33E-02
123	GO:0009909: regulation of flower development	1.39E-02
124	GO:0009611: response to wounding	1.41E-02
125	GO:0006487: protein N-linked glycosylation	1.43E-02
126	GO:0009695: jasmonic acid biosynthetic process	1.53E-02
127	GO:0009768: photosynthesis, light harvesting in photosystem I	1.53E-02
128	GO:0019953: sexual reproduction	1.53E-02
129	GO:0031408: oxylipin biosynthetic process	1.64E-02
130	GO:0051260: protein homooligomerization	1.64E-02
131	GO:0010017: red or far-red light signaling pathway	1.75E-02
132	GO:0009742: brassinosteroid mediated signaling pathway	1.90E-02
133	GO:0010584: pollen exine formation	1.97E-02
134	GO:0048443: stamen development	1.97E-02
135	GO:0019722: calcium-mediated signaling	1.97E-02
136	GO:0042127: regulation of cell proliferation	1.97E-02
137	GO:0034220: ion transmembrane transport	2.21E-02
138	GO:0015991: ATP hydrolysis coupled proton transport	2.21E-02
139	GO:0048653: anther development	2.21E-02
140	GO:0009958: positive gravitropism	2.33E-02
141	GO:0006520: cellular amino acid metabolic process	2.33E-02
142	GO:0009741: response to brassinosteroid	2.33E-02
143	GO:0015986: ATP synthesis coupled proton transport	2.45E-02
144	GO:0007059: chromosome segregation	2.45E-02
145	GO:0019252: starch biosynthetic process	2.58E-02
146	GO:0008654: phospholipid biosynthetic process	2.58E-02
147	GO:0008152: metabolic process	2.62E-02
148	GO:0071554: cell wall organization or biogenesis	2.71E-02
149	GO:0007264: small GTPase mediated signal transduction	2.84E-02
150	GO:1901657: glycosyl compound metabolic process	2.97E-02
151	GO:0010252: auxin homeostasis	3.10E-02
152	GO:0009828: plant-type cell wall loosening	3.10E-02
153	GO:0007267: cell-cell signaling	3.24E-02
154	GO:0051607: defense response to virus	3.38E-02
155	GO:0009911: positive regulation of flower development	3.52E-02
156	GO:0009734: auxin-activated signaling pathway	3.55E-02
157	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.66E-02
158	GO:0010029: regulation of seed germination	3.66E-02
159	GO:0010411: xyloglucan metabolic process	3.95E-02
160	GO:0006468: protein phosphorylation	4.02E-02
161	GO:0016311: dephosphorylation	4.10E-02
162	GO:0030244: cellulose biosynthetic process	4.25E-02
163	GO:0018298: protein-chromophore linkage	4.25E-02
164	GO:0009832: plant-type cell wall biogenesis	4.40E-02
165	GO:0010311: lateral root formation	4.40E-02
166	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	4.43E-02
167	GO:0009826: unidimensional cell growth	4.60E-02
168	GO:0010119: regulation of stomatal movement	4.71E-02
169	GO:0007568: aging	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0016210: naringenin-chalcone synthase activity	0.00E+00
2	GO:0047213: anthocyanidin 3-O-glucosyltransferase activity	0.00E+00
3	GO:0003904: deoxyribodipyrimidine photo-lyase activity	0.00E+00
4	GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity	0.00E+00
5	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
6	GO:0045552: dihydrokaempferol 4-reductase activity	0.00E+00
7	GO:0033961: cis-stilbene-oxide hydrolase activity	0.00E+00
8	GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity	0.00E+00
9	GO:0030795: jasmonate O-methyltransferase activity	0.00E+00
10	GO:0102078: methyl jasmonate methylesterase activity	0.00E+00
11	GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity	0.00E+00
12	GO:0047890: flavanone 4-reductase activity	0.00E+00
13	GO:0045486: naringenin 3-dioxygenase activity	0.00E+00
14	GO:1990055: phenylacetaldehyde synthase activity	0.00E+00
15	GO:0016719: carotene 7,8-desaturase activity	0.00E+00
16	GO:0045430: chalcone isomerase activity	4.98E-05
17	GO:0016757: transferase activity, transferring glycosyl groups	8.38E-05
18	GO:0016161: beta-amylase activity	1.58E-04
19	GO:0080132: fatty acid alpha-hydroxylase activity	2.72E-04
20	GO:0010313: phytochrome binding	2.72E-04
21	GO:0090448: glucosinolate:proton symporter activity	2.72E-04
22	GO:0004837: tyrosine decarboxylase activity	2.72E-04
23	GO:0000064: L-ornithine transmembrane transporter activity	5.99E-04
24	GO:0004614: phosphoglucomutase activity	5.99E-04
25	GO:0050377: UDP-glucose 4,6-dehydratase activity	5.99E-04
26	GO:0004512: inositol-3-phosphate synthase activity	5.99E-04
27	GO:0048531: beta-1,3-galactosyltransferase activity	5.99E-04
28	GO:0010291: carotene beta-ring hydroxylase activity	5.99E-04
29	GO:0016868: intramolecular transferase activity, phosphotransferases	5.99E-04
30	GO:0008460: dTDP-glucose 4,6-dehydratase activity	5.99E-04
31	GO:0010280: UDP-L-rhamnose synthase activity	5.99E-04
32	GO:0003913: DNA photolyase activity	9.72E-04
33	GO:0008253: 5'-nucleotidase activity	9.72E-04
34	GO:0033897: ribonuclease T2 activity	9.72E-04
35	GO:0031418: L-ascorbic acid binding	1.24E-03
36	GO:0048027: mRNA 5'-UTR binding	1.39E-03
37	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	1.39E-03
38	GO:0001872: (1->3)-beta-D-glucan binding	1.39E-03
39	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.64E-03
40	GO:0080032: methyl jasmonate esterase activity	1.86E-03
41	GO:0098599: palmitoyl hydrolase activity	1.86E-03
42	GO:0046527: glucosyltransferase activity	1.86E-03
43	GO:0050378: UDP-glucuronate 4-epimerase activity	1.86E-03
44	GO:0004301: epoxide hydrolase activity	1.86E-03
45	GO:0046982: protein heterodimerization activity	2.21E-03
46	GO:0045547: dehydrodolichyl diphosphate synthase activity	2.37E-03
47	GO:0002094: polyprenyltransferase activity	2.37E-03
48	GO:0031386: protein tag	2.37E-03
49	GO:0045431: flavonol synthase activity	2.37E-03
50	GO:0004672: protein kinase activity	2.71E-03
51	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.75E-03
52	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.75E-03
53	GO:0008429: phosphatidylethanolamine binding	2.93E-03
54	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.93E-03
55	GO:0102229: amylopectin maltohydrolase activity	2.93E-03
56	GO:0035252: UDP-xylosyltransferase activity	2.93E-03
57	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.93E-03
58	GO:0080030: methyl indole-3-acetate esterase activity	2.93E-03
59	GO:0008474: palmitoyl-(protein) hydrolase activity	2.93E-03
60	GO:0008195: phosphatidate phosphatase activity	3.52E-03
61	GO:0016759: cellulose synthase activity	3.65E-03
62	GO:0016758: transferase activity, transferring hexosyl groups	3.96E-03
63	GO:0102425: myricetin 3-O-glucosyltransferase activity	4.15E-03
64	GO:0102360: daphnetin 3-O-glucosyltransferase activity	4.15E-03
65	GO:0019899: enzyme binding	4.15E-03
66	GO:0047893: flavonol 3-O-glucosyltransferase activity	4.82E-03
67	GO:0030247: polysaccharide binding	5.13E-03
68	GO:0008271: secondary active sulfate transmembrane transporter activity	5.52E-03
69	GO:0016207: 4-coumarate-CoA ligase activity	6.25E-03
70	GO:0016491: oxidoreductase activity	6.71E-03
71	GO:0009672: auxin:proton symporter activity	7.03E-03
72	GO:0030955: potassium ion binding	7.03E-03
73	GO:0004743: pyruvate kinase activity	7.03E-03
74	GO:0008194: UDP-glycosyltransferase activity	7.13E-03
75	GO:0004860: protein kinase inhibitor activity	8.66E-03
76	GO:0046961: proton-transporting ATPase activity, rotational mechanism	8.66E-03
77	GO:0008327: methyl-CpG binding	8.66E-03
78	GO:0015116: sulfate transmembrane transporter activity	9.52E-03
79	GO:0004521: endoribonuclease activity	9.52E-03
80	GO:0010329: auxin efflux transmembrane transporter activity	1.04E-02
81	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.13E-02
82	GO:0051119: sugar transmembrane transporter activity	1.23E-02
83	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.33E-02
84	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.33E-02
85	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.33E-02
86	GO:0031409: pigment binding	1.33E-02
87	GO:0003824: catalytic activity	1.49E-02
88	GO:0035251: UDP-glucosyltransferase activity	1.64E-02
89	GO:0004540: ribonuclease activity	1.64E-02
90	GO:0004176: ATP-dependent peptidase activity	1.64E-02
91	GO:0016746: transferase activity, transferring acyl groups	1.85E-02
92	GO:0016760: cellulose synthase (UDP-forming) activity	1.86E-02
93	GO:0050662: coenzyme binding	2.45E-02
94	GO:0016853: isomerase activity	2.45E-02
95	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.56E-02
96	GO:0019901: protein kinase binding	2.58E-02
97	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.71E-02
98	GO:0004518: nuclease activity	2.84E-02
99	GO:0051015: actin filament binding	2.97E-02
100	GO:0016791: phosphatase activity	3.10E-02
101	GO:0016722: oxidoreductase activity, oxidizing metal ions	3.24E-02
102	GO:0008237: metallopeptidase activity	3.24E-02
103	GO:0005200: structural constituent of cytoskeleton	3.24E-02
104	GO:0016413: O-acetyltransferase activity	3.38E-02
105	GO:0015250: water channel activity	3.52E-02
106	GO:0016168: chlorophyll binding	3.66E-02
107	GO:0008375: acetylglucosaminyltransferase activity	3.80E-02
108	GO:0102483: scopolin beta-glucosidase activity	3.95E-02
109	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.95E-02
110	GO:0016887: ATPase activity	4.00E-02
111	GO:0005215: transporter activity	4.48E-02
112	GO:0004222: metalloendopeptidase activity	4.55E-02
113	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.55E-02
114	GO:0000287: magnesium ion binding	4.69E-02
115	GO:0016788: hydrolase activity, acting on ester bonds	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0042406: extrinsic component of endoplasmic reticulum membrane	1.22E-05
2	GO:0046658: anchored component of plasma membrane	5.03E-05
3	GO:0031225: anchored component of membrane	1.64E-04
4	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	5.99E-04
5	GO:0009509: chromoplast	9.72E-04
6	GO:0009505: plant-type cell wall	1.91E-03
7	GO:0009506: plasmodesma	3.24E-03
8	GO:0005886: plasma membrane	3.25E-03
9	GO:0010369: chromocenter	3.52E-03
10	GO:0000786: nucleosome	6.89E-03
11	GO:0005794: Golgi apparatus	8.47E-03
12	GO:0005765: lysosomal membrane	8.66E-03
13	GO:0048471: perinuclear region of cytoplasm	8.66E-03
14	GO:0005753: mitochondrial proton-transporting ATP synthase complex	1.23E-02
15	GO:0030076: light-harvesting complex	1.23E-02
16	GO:0009507: chloroplast	1.61E-02
17	GO:0010287: plastoglobule	2.13E-02
18	GO:0000139: Golgi membrane	2.13E-02
19	GO:0005618: cell wall	2.25E-02
20	GO:0009522: photosystem I	2.45E-02
21	GO:0009523: photosystem II	2.58E-02
22	GO:0043231: intracellular membrane-bounded organelle	2.62E-02
23	GO:0071944: cell periphery	2.97E-02
24	GO:0032580: Golgi cisterna membrane	3.10E-02
25	GO:0009705: plant-type vacuole membrane	3.10E-02
26	GO:0005783: endoplasmic reticulum	3.23E-02
27	GO:0010319: stromule	3.24E-02
28	GO:0005887: integral component of plasma membrane	3.40E-02
29	GO:0016021: integral component of membrane	4.49E-02