co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G30160

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048867: stem cell fate determination	0.00E+00
2	GO:0055071: manganese ion homeostasis	1.39E-05
3	GO:0031338: regulation of vesicle fusion	1.39E-05
4	GO:0071217: cellular response to external biotic stimulus	3.65E-05
5	GO:0046898: response to cycloheximide	3.65E-05
6	GO:0032012: regulation of ARF protein signal transduction	6.55E-05
7	GO:0090630: activation of GTPase activity	6.55E-05
8	GO:0006517: protein deglycosylation	6.55E-05
9	GO:0010272: response to silver ion	6.55E-05
10	GO:0006473: protein acetylation	6.55E-05
11	GO:0006013: mannose metabolic process	6.55E-05
12	GO:0080119: ER body organization	9.94E-05
13	GO:0019048: modulation by virus of host morphology or physiology	9.94E-05
14	GO:0034052: positive regulation of plant-type hypersensitive response	1.78E-04
15	GO:0015866: ADP transport	2.22E-04
16	GO:0006828: manganese ion transport	2.22E-04
17	GO:0033962: cytoplasmic mRNA processing body assembly	2.68E-04
18	GO:0006491: N-glycan processing	3.65E-04
19	GO:0006875: cellular metal ion homeostasis	3.65E-04
20	GO:0016571: histone methylation	5.23E-04
21	GO:0016573: histone acetylation	5.23E-04
22	GO:0006816: calcium ion transport	6.34E-04
23	GO:0010152: pollen maturation	6.93E-04
24	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	6.93E-04
25	GO:0016024: CDP-diacylglycerol biosynthetic process	6.93E-04
26	GO:0048467: gynoecium development	8.13E-04
27	GO:0006487: protein N-linked glycosylation	1.00E-03
28	GO:0010073: meristem maintenance	1.07E-03
29	GO:0006874: cellular calcium ion homeostasis	1.07E-03
30	GO:0009294: DNA mediated transformation	1.27E-03
31	GO:0051028: mRNA transport	1.41E-03
32	GO:0008284: positive regulation of cell proliferation	1.41E-03
33	GO:0010501: RNA secondary structure unwinding	1.49E-03
34	GO:0006623: protein targeting to vacuole	1.72E-03
35	GO:0007275: multicellular organism development	1.84E-03
36	GO:0016032: viral process	1.88E-03
37	GO:0001666: response to hypoxia	2.30E-03
38	GO:0006357: regulation of transcription from RNA polymerase II promoter	2.30E-03
39	GO:0009816: defense response to bacterium, incompatible interaction	2.39E-03
40	GO:0006974: cellular response to DNA damage stimulus	2.48E-03
41	GO:0009627: systemic acquired resistance	2.48E-03
42	GO:0048573: photoperiodism, flowering	2.57E-03
43	GO:0048481: plant ovule development	2.75E-03
44	GO:0008219: cell death	2.75E-03
45	GO:0009910: negative regulation of flower development	3.03E-03
46	GO:0009631: cold acclimation	3.03E-03
47	GO:0006839: mitochondrial transport	3.52E-03
48	GO:0006897: endocytosis	3.63E-03
49	GO:0000209: protein polyubiquitination	3.93E-03
50	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.36E-03
51	GO:0009846: pollen germination	4.47E-03
52	GO:0042538: hyperosmotic salinity response	4.47E-03
53	GO:0009909: regulation of flower development	5.03E-03
54	GO:0006417: regulation of translation	5.03E-03
55	GO:0009626: plant-type hypersensitive response	5.50E-03
56	GO:0009620: response to fungus	5.62E-03
57	GO:0009624: response to nematode	5.98E-03
58	GO:0009790: embryo development	7.78E-03
59	GO:0016036: cellular response to phosphate starvation	8.32E-03
60	GO:0040008: regulation of growth	8.46E-03
61	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	9.45E-03
62	GO:0006470: protein dephosphorylation	9.60E-03
63	GO:0009617: response to bacterium	9.90E-03
64	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.42E-02
65	GO:0016192: vesicle-mediated transport	1.43E-02
66	GO:0006886: intracellular protein transport	1.61E-02
67	GO:0006397: mRNA processing	1.88E-02
68	GO:0048364: root development	1.88E-02
69	GO:0009908: flower development	2.55E-02
70	GO:0045893: positive regulation of transcription, DNA-templated	3.03E-02
71	GO:0006979: response to oxidative stress	4.56E-02
72	GO:0030154: cell differentiation	4.82E-02
73	GO:0009733: response to auxin	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0060090: binding, bridging	0.00E+00
2	GO:0015410: manganese-transporting ATPase activity	0.00E+00
3	GO:0004572: mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity	0.00E+00
4	GO:0005388: calcium-transporting ATPase activity	1.08E-05
5	GO:0003712: transcription cofactor activity	1.46E-05
6	GO:0015228: coenzyme A transmembrane transporter activity	3.65E-05
7	GO:0019829: cation-transporting ATPase activity	6.55E-05
8	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	1.37E-04
9	GO:0005086: ARF guanyl-nucleotide exchange factor activity	1.37E-04
10	GO:0002020: protease binding	1.78E-04
11	GO:0080122: AMP transmembrane transporter activity	1.78E-04
12	GO:0017137: Rab GTPase binding	1.78E-04
13	GO:0004559: alpha-mannosidase activity	2.68E-04
14	GO:0015217: ADP transmembrane transporter activity	2.68E-04
15	GO:0001104: RNA polymerase II transcription cofactor activity	4.16E-04
16	GO:0043424: protein histidine kinase binding	1.07E-03
17	GO:0004402: histone acetyltransferase activity	1.49E-03
18	GO:0030276: clathrin binding	1.56E-03
19	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.13E-03
20	GO:0004004: ATP-dependent RNA helicase activity	2.57E-03
21	GO:0005096: GTPase activator activity	2.84E-03
22	GO:0005198: structural molecule activity	4.15E-03
23	GO:0008026: ATP-dependent helicase activity	6.22E-03
24	GO:0046982: protein heterodimerization activity	1.17E-02
25	GO:0003682: chromatin binding	1.24E-02
26	GO:0061630: ubiquitin protein ligase activity	1.43E-02
27	GO:0004722: protein serine/threonine phosphatase activity	1.68E-02
28	GO:0016887: ATPase activity	2.49E-02
29	GO:0030246: carbohydrate binding	3.39E-02
30	GO:0005516: calmodulin binding	3.67E-02
31	GO:0005515: protein binding	4.11E-02
32	GO:0008270: zinc ion binding	4.60E-02
33	GO:0003824: catalytic activity	4.85E-02
34	GO:0005215: transporter activity	4.87E-02

Rank	GO Term	Adjusted P value
1	GO:0030117: membrane coat	1.37E-04
2	GO:0030663: COPI-coated vesicle membrane	1.37E-04
3	GO:0000139: Golgi membrane	1.38E-04
4	GO:0030126: COPI vesicle coat	1.78E-04
5	GO:0070847: core mediator complex	2.22E-04
6	GO:0012505: endomembrane system	3.70E-04
7	GO:0010494: cytoplasmic stress granule	4.68E-04
8	GO:0005802: trans-Golgi network	5.96E-04
9	GO:0005884: actin filament	6.34E-04
10	GO:0030136: clathrin-coated vesicle	1.41E-03
11	GO:0005770: late endosome	1.56E-03
12	GO:0005794: Golgi apparatus	1.74E-03
13	GO:0016592: mediator complex	1.88E-03
14	GO:0000932: P-body	2.30E-03
15	GO:0031902: late endosome membrane	3.63E-03
16	GO:0005768: endosome	5.54E-03
17	GO:0005654: nucleoplasm	6.86E-03
18	GO:0005789: endoplasmic reticulum membrane	9.41E-03
19	GO:0005743: mitochondrial inner membrane	1.73E-02
20	GO:0005887: integral component of plasma membrane	2.27E-02
21	GO:0009579: thylakoid	3.12E-02
22	GO:0005622: intracellular	4.13E-02
23	GO:0005783: endoplasmic reticulum	4.31E-02