Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G30020

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090627: plant epidermal cell differentiation0.00E+00
2GO:0015995: chlorophyll biosynthetic process3.79E-05
3GO:0006898: receptor-mediated endocytosis1.52E-04
4GO:0010541: acropetal auxin transport1.52E-04
5GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.51E-04
6GO:0006013: mannose metabolic process2.57E-04
7GO:0010160: formation of animal organ boundary2.57E-04
8GO:0016045: detection of bacterium2.57E-04
9GO:0010359: regulation of anion channel activity2.57E-04
10GO:0045493: xylan catabolic process2.57E-04
11GO:0051513: regulation of monopolar cell growth3.73E-04
12GO:0010239: chloroplast mRNA processing3.73E-04
13GO:0043481: anthocyanin accumulation in tissues in response to UV light3.73E-04
14GO:1901332: negative regulation of lateral root development3.73E-04
15GO:0045490: pectin catabolic process4.84E-04
16GO:0009828: plant-type cell wall loosening5.16E-04
17GO:0010438: cellular response to sulfur starvation6.32E-04
18GO:0010411: xyloglucan metabolic process7.15E-04
19GO:0009913: epidermal cell differentiation7.73E-04
20GO:0060918: auxin transport7.73E-04
21GO:0009759: indole glucosinolate biosynthetic process7.73E-04
22GO:1901259: chloroplast rRNA processing9.20E-04
23GO:0009942: longitudinal axis specification9.20E-04
24GO:0009787: regulation of abscisic acid-activated signaling pathway1.24E-03
25GO:0006353: DNA-templated transcription, termination1.24E-03
26GO:0009926: auxin polar transport1.26E-03
27GO:0015979: photosynthesis1.28E-03
28GO:0007389: pattern specification process1.41E-03
29GO:0009664: plant-type cell wall organization1.57E-03
30GO:0010206: photosystem II repair1.58E-03
31GO:0006783: heme biosynthetic process1.58E-03
32GO:0009638: phototropism1.77E-03
33GO:0006949: syncytium formation1.96E-03
34GO:0006782: protoporphyrinogen IX biosynthetic process1.96E-03
35GO:0010015: root morphogenesis2.17E-03
36GO:0052544: defense response by callose deposition in cell wall2.17E-03
37GO:0008361: regulation of cell size2.37E-03
38GO:0002213: defense response to insect2.37E-03
39GO:0009785: blue light signaling pathway2.58E-03
40GO:0030048: actin filament-based movement2.58E-03
41GO:0009734: auxin-activated signaling pathway2.71E-03
42GO:0010540: basipetal auxin transport2.80E-03
43GO:0000162: tryptophan biosynthetic process3.26E-03
44GO:0051017: actin filament bundle assembly3.49E-03
45GO:0016998: cell wall macromolecule catabolic process3.98E-03
46GO:0009739: response to gibberellin4.54E-03
47GO:0048443: stamen development4.76E-03
48GO:0006284: base-excision repair4.76E-03
49GO:0042335: cuticle development5.31E-03
50GO:0009958: positive gravitropism5.59E-03
51GO:0009826: unidimensional cell growth6.04E-03
52GO:0048825: cotyledon development6.17E-03
53GO:0000302: response to reactive oxygen species6.46E-03
54GO:0010583: response to cyclopentenone6.76E-03
55GO:0010252: auxin homeostasis7.38E-03
56GO:0009639: response to red or far red light7.38E-03
57GO:0009627: systemic acquired resistance9.01E-03
58GO:0045892: negative regulation of transcription, DNA-templated9.46E-03
59GO:0006869: lipid transport1.02E-02
60GO:0000160: phosphorelay signal transduction system1.04E-02
61GO:0010311: lateral root formation1.04E-02
62GO:0010218: response to far red light1.08E-02
63GO:0048527: lateral root development1.11E-02
64GO:0016051: carbohydrate biosynthetic process1.19E-02
65GO:0009637: response to blue light1.19E-02
66GO:0048364: root development1.20E-02
67GO:0034599: cellular response to oxidative stress1.23E-02
68GO:0009640: photomorphogenesis1.42E-02
69GO:0010114: response to red light1.42E-02
70GO:0042546: cell wall biogenesis1.46E-02
71GO:0006855: drug transmembrane transport1.58E-02
72GO:0009736: cytokinin-activated signaling pathway1.75E-02
73GO:0009735: response to cytokinin1.87E-02
74GO:0009740: gibberellic acid mediated signaling pathway2.16E-02
75GO:0009624: response to nematode2.25E-02
76GO:0045893: positive regulation of transcription, DNA-templated2.35E-02
77GO:0055085: transmembrane transport2.60E-02
78GO:0009058: biosynthetic process2.75E-02
79GO:0009845: seed germination2.80E-02
80GO:0042744: hydrogen peroxide catabolic process2.90E-02
81GO:0007623: circadian rhythm3.33E-02
82GO:0071555: cell wall organization4.13E-02
83GO:0009733: response to auxin4.63E-02
RankGO TermAdjusted P value
1GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
2GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
3GO:0047661: amino-acid racemase activity0.00E+00
4GO:0016851: magnesium chelatase activity2.09E-06
5GO:0030570: pectate lyase activity6.42E-06
6GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity6.26E-05
7GO:0004853: uroporphyrinogen decarboxylase activity6.26E-05
8GO:0010329: auxin efflux transmembrane transporter activity1.03E-04
9GO:0016829: lyase activity3.54E-04
10GO:0051015: actin filament binding4.86E-04
11GO:0009044: xylan 1,4-beta-xylosidase activity4.99E-04
12GO:0046556: alpha-L-arabinofuranosidase activity4.99E-04
13GO:0008725: DNA-3-methyladenine glycosylase activity6.32E-04
14GO:0004130: cytochrome-c peroxidase activity7.73E-04
15GO:0004559: alpha-mannosidase activity9.20E-04
16GO:0009672: auxin:proton symporter activity1.77E-03
17GO:0015020: glucuronosyltransferase activity1.96E-03
18GO:0031072: heat shock protein binding2.58E-03
19GO:0008289: lipid binding2.67E-03
20GO:0003774: motor activity2.80E-03
21GO:0019843: rRNA binding2.96E-03
22GO:0003756: protein disulfide isomerase activity4.76E-03
23GO:0042626: ATPase activity, coupled to transmembrane movement of substances5.15E-03
24GO:0016762: xyloglucan:xyloglucosyl transferase activity6.46E-03
25GO:0004518: nuclease activity6.76E-03
26GO:0000156: phosphorelay response regulator activity7.07E-03
27GO:0008375: acetylglucosaminyltransferase activity9.01E-03
28GO:0016798: hydrolase activity, acting on glycosyl bonds9.36E-03
29GO:0043621: protein self-association1.50E-02
30GO:0005515: protein binding1.64E-02
31GO:0003777: microtubule motor activity1.89E-02
32GO:0051082: unfolded protein binding2.25E-02
33GO:0008026: ATP-dependent helicase activity2.35E-02
34GO:0030246: carbohydrate binding2.75E-02
35GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.17E-02
36GO:0004601: peroxidase activity4.54E-02
37GO:0016301: kinase activity4.59E-02
38GO:0016788: hydrolase activity, acting on ester bonds4.60E-02
RankGO TermAdjusted P value
1GO:0098572: stromal side of plastid thylakoid membrane0.00E+00
2GO:0010007: magnesium chelatase complex8.71E-07
3GO:0009534: chloroplast thylakoid1.24E-05
4GO:0005618: cell wall4.45E-05
5GO:0009570: chloroplast stroma1.97E-04
6GO:0009543: chloroplast thylakoid lumen3.19E-04
7GO:0009535: chloroplast thylakoid membrane3.22E-04
8GO:0009505: plant-type cell wall5.23E-04
9GO:0009507: chloroplast8.38E-04
10GO:0031977: thylakoid lumen1.16E-03
11GO:0005856: cytoskeleton1.41E-03
12GO:0042644: chloroplast nucleoid1.58E-03
13GO:0005576: extracellular region1.59E-03
14GO:0016459: myosin complex1.96E-03
15GO:0005884: actin filament2.17E-03
16GO:0009508: plastid chromosome2.58E-03
17GO:0030095: chloroplast photosystem II2.80E-03
18GO:0015629: actin cytoskeleton4.50E-03
19GO:0009579: thylakoid4.56E-03
20GO:0009523: photosystem II6.17E-03
21GO:0009295: nucleoid7.70E-03
22GO:0048046: apoplast1.27E-02
23GO:0009941: chloroplast envelope1.87E-02
24GO:0010008: endosome membrane2.02E-02
25GO:0009706: chloroplast inner membrane2.25E-02
26GO:0016020: membrane2.91E-02
Gene type



Gene DE type