GO Enrichment Analysis of Co-expressed Genes with
AT4G29720
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009773: photosynthetic electron transport in photosystem I | 6.13E-08 |
| 2 | GO:0015979: photosynthesis | 9.65E-06 |
| 3 | GO:1902458: positive regulation of stomatal opening | 1.97E-05 |
| 4 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 1.97E-05 |
| 5 | GO:0071277: cellular response to calcium ion | 1.97E-05 |
| 6 | GO:0051180: vitamin transport | 1.97E-05 |
| 7 | GO:0030974: thiamine pyrophosphate transport | 1.97E-05 |
| 8 | GO:0010207: photosystem II assembly | 2.16E-05 |
| 9 | GO:0006729: tetrahydrobiopterin biosynthetic process | 5.10E-05 |
| 10 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 5.10E-05 |
| 11 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 5.10E-05 |
| 12 | GO:0015893: drug transport | 5.10E-05 |
| 13 | GO:0006000: fructose metabolic process | 9.05E-05 |
| 14 | GO:0071484: cellular response to light intensity | 1.36E-04 |
| 15 | GO:0045727: positive regulation of translation | 1.86E-04 |
| 16 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.40E-04 |
| 17 | GO:0016120: carotene biosynthetic process | 2.40E-04 |
| 18 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 2.97E-04 |
| 19 | GO:0009395: phospholipid catabolic process | 4.19E-04 |
| 20 | GO:0009772: photosynthetic electron transport in photosystem II | 4.19E-04 |
| 21 | GO:0010444: guard mother cell differentiation | 4.19E-04 |
| 22 | GO:0009704: de-etiolation | 4.84E-04 |
| 23 | GO:2000070: regulation of response to water deprivation | 4.84E-04 |
| 24 | GO:0042255: ribosome assembly | 4.84E-04 |
| 25 | GO:0009735: response to cytokinin | 5.13E-04 |
| 26 | GO:0032544: plastid translation | 5.50E-04 |
| 27 | GO:0006002: fructose 6-phosphate metabolic process | 5.50E-04 |
| 28 | GO:0015996: chlorophyll catabolic process | 5.50E-04 |
| 29 | GO:0007186: G-protein coupled receptor signaling pathway | 5.50E-04 |
| 30 | GO:0010206: photosystem II repair | 6.19E-04 |
| 31 | GO:0090333: regulation of stomatal closure | 6.19E-04 |
| 32 | GO:0010205: photoinhibition | 6.90E-04 |
| 33 | GO:0018119: peptidyl-cysteine S-nitrosylation | 8.37E-04 |
| 34 | GO:0045037: protein import into chloroplast stroma | 9.12E-04 |
| 35 | GO:0009725: response to hormone | 9.90E-04 |
| 36 | GO:0006094: gluconeogenesis | 9.90E-04 |
| 37 | GO:0005986: sucrose biosynthetic process | 9.90E-04 |
| 38 | GO:0019253: reductive pentose-phosphate cycle | 1.07E-03 |
| 39 | GO:0005985: sucrose metabolic process | 1.15E-03 |
| 40 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.23E-03 |
| 41 | GO:0006487: protein N-linked glycosylation | 1.32E-03 |
| 42 | GO:0009658: chloroplast organization | 1.48E-03 |
| 43 | GO:0016998: cell wall macromolecule catabolic process | 1.50E-03 |
| 44 | GO:0031408: oxylipin biosynthetic process | 1.50E-03 |
| 45 | GO:0042127: regulation of cell proliferation | 1.78E-03 |
| 46 | GO:0016117: carotenoid biosynthetic process | 1.88E-03 |
| 47 | GO:0010182: sugar mediated signaling pathway | 2.08E-03 |
| 48 | GO:0015986: ATP synthesis coupled proton transport | 2.18E-03 |
| 49 | GO:0002229: defense response to oomycetes | 2.40E-03 |
| 50 | GO:0032502: developmental process | 2.50E-03 |
| 51 | GO:0010027: thylakoid membrane organization | 3.07E-03 |
| 52 | GO:0010411: xyloglucan metabolic process | 3.43E-03 |
| 53 | GO:0018298: protein-chromophore linkage | 3.68E-03 |
| 54 | GO:0006839: mitochondrial transport | 4.72E-03 |
| 55 | GO:0009744: response to sucrose | 5.13E-03 |
| 56 | GO:0042546: cell wall biogenesis | 5.28E-03 |
| 57 | GO:0009644: response to high light intensity | 5.42E-03 |
| 58 | GO:0006855: drug transmembrane transport | 5.71E-03 |
| 59 | GO:0006364: rRNA processing | 6.31E-03 |
| 60 | GO:0006096: glycolytic process | 7.08E-03 |
| 61 | GO:0048316: seed development | 7.24E-03 |
| 62 | GO:0051726: regulation of cell cycle | 8.39E-03 |
| 63 | GO:0006633: fatty acid biosynthetic process | 1.11E-02 |
| 64 | GO:0007623: circadian rhythm | 1.18E-02 |
| 65 | GO:0009409: response to cold | 1.29E-02 |
| 66 | GO:0008380: RNA splicing | 1.34E-02 |
| 67 | GO:0006810: transport | 1.40E-02 |
| 68 | GO:0007049: cell cycle | 1.74E-02 |
| 69 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.92E-02 |
| 70 | GO:0051301: cell division | 3.96E-02 |
| 71 | GO:0045893: positive regulation of transcription, DNA-templated | 4.11E-02 |
| 72 | GO:0055085: transmembrane transport | 4.41E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045436: lycopene beta cyclase activity | 0.00E+00 |
| 2 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 3 | GO:0090422: thiamine pyrophosphate transporter activity | 1.97E-05 |
| 4 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 1.97E-05 |
| 5 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 5.10E-05 |
| 6 | GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | 1.36E-04 |
| 7 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 1.86E-04 |
| 8 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 5.50E-04 |
| 9 | GO:0019843: rRNA binding | 7.20E-04 |
| 10 | GO:0008266: poly(U) RNA binding | 1.07E-03 |
| 11 | GO:0008146: sulfotransferase activity | 1.15E-03 |
| 12 | GO:0022891: substrate-specific transmembrane transporter activity | 1.68E-03 |
| 13 | GO:0003727: single-stranded RNA binding | 1.78E-03 |
| 14 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 2.08E-03 |
| 15 | GO:0050662: coenzyme binding | 2.18E-03 |
| 16 | GO:0004872: receptor activity | 2.29E-03 |
| 17 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.40E-03 |
| 18 | GO:0016168: chlorophyll binding | 3.19E-03 |
| 19 | GO:0008375: acetylglucosaminyltransferase activity | 3.31E-03 |
| 20 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 3.43E-03 |
| 21 | GO:0015238: drug transmembrane transporter activity | 3.80E-03 |
| 22 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 3.93E-03 |
| 23 | GO:0003993: acid phosphatase activity | 4.45E-03 |
| 24 | GO:0003690: double-stranded DNA binding | 6.46E-03 |
| 25 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 9.60E-03 |
| 26 | GO:0005215: transporter activity | 1.05E-02 |
| 27 | GO:0015297: antiporter activity | 1.14E-02 |
| 28 | GO:0003729: mRNA binding | 1.42E-02 |
| 29 | GO:0016788: hydrolase activity, acting on ester bonds | 1.63E-02 |
| 30 | GO:0004871: signal transducer activity | 2.20E-02 |
| 31 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010240: plastid pyruvate dehydrogenase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 3.03E-10 |
| 3 | GO:0009534: chloroplast thylakoid | 3.58E-09 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.68E-08 |
| 5 | GO:0009579: thylakoid | 1.28E-07 |
| 6 | GO:0010319: stromule | 1.98E-06 |
| 7 | GO:0030095: chloroplast photosystem II | 2.16E-05 |
| 8 | GO:0009528: plastid inner membrane | 9.05E-05 |
| 9 | GO:0009527: plastid outer membrane | 1.86E-04 |
| 10 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 2.97E-04 |
| 11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 6.19E-04 |
| 12 | GO:0009570: chloroplast stroma | 6.72E-04 |
| 13 | GO:0010287: plastoglobule | 6.84E-04 |
| 14 | GO:0009543: chloroplast thylakoid lumen | 7.20E-04 |
| 15 | GO:0009654: photosystem II oxygen evolving complex | 1.41E-03 |
| 16 | GO:0009532: plastid stroma | 1.50E-03 |
| 17 | GO:0009941: chloroplast envelope | 1.94E-03 |
| 18 | GO:0009523: photosystem II | 2.29E-03 |
| 19 | GO:0019898: extrinsic component of membrane | 2.29E-03 |
| 20 | GO:0009707: chloroplast outer membrane | 3.68E-03 |
| 21 | GO:0016021: integral component of membrane | 4.64E-03 |
| 22 | GO:0031977: thylakoid lumen | 4.86E-03 |
| 23 | GO:0048046: apoplast | 6.98E-03 |
| 24 | GO:0046658: anchored component of plasma membrane | 1.44E-02 |
| 25 | GO:0031969: chloroplast membrane | 1.87E-02 |
| 26 | GO:0005743: mitochondrial inner membrane | 2.35E-02 |
| 27 | GO:0005739: mitochondrion | 3.58E-02 |