co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G29520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006457: protein folding	3.72E-21
2	GO:0046686: response to cadmium ion	9.39E-10
3	GO:0009408: response to heat	9.15E-08
4	GO:0009651: response to salt stress	5.52E-07
5	GO:0055074: calcium ion homeostasis	1.03E-06
6	GO:0034976: response to endoplasmic reticulum stress	3.44E-06
7	GO:0009615: response to virus	3.58E-05
8	GO:0048448: stamen morphogenesis	6.91E-05
9	GO:0010450: inflorescence meristem growth	6.91E-05
10	GO:0006820: anion transport	1.03E-04
11	GO:0006626: protein targeting to mitochondrion	1.19E-04
12	GO:0015865: purine nucleotide transport	1.66E-04
13	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	1.66E-04
14	GO:0048833: specification of floral organ number	1.66E-04
15	GO:0051131: chaperone-mediated protein complex assembly	4.06E-04
16	GO:0046902: regulation of mitochondrial membrane permeability	4.06E-04
17	GO:0033356: UDP-L-arabinose metabolic process	5.42E-04
18	GO:0010286: heat acclimation	6.19E-04
19	GO:0006090: pyruvate metabolic process	6.87E-04
20	GO:0046283: anthocyanin-containing compound metabolic process	6.87E-04
21	GO:0009409: response to cold	7.56E-04
22	GO:0009627: systemic acquired resistance	7.69E-04
23	GO:0018258: protein O-linked glycosylation via hydroxyproline	8.40E-04
24	GO:0006796: phosphate-containing compound metabolic process	8.40E-04
25	GO:0010405: arabinogalactan protein metabolic process	8.40E-04
26	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	9.99E-04
27	GO:0071669: plant-type cell wall organization or biogenesis	1.17E-03
28	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.17E-03
29	GO:1900056: negative regulation of leaf senescence	1.17E-03
30	GO:0006511: ubiquitin-dependent protein catabolic process	1.20E-03
31	GO:0006605: protein targeting	1.34E-03
32	GO:0050821: protein stabilization	1.34E-03
33	GO:0031540: regulation of anthocyanin biosynthetic process	1.34E-03
34	GO:0010204: defense response signaling pathway, resistance gene-independent	1.53E-03
35	GO:0009880: embryonic pattern specification	1.53E-03
36	GO:0098656: anion transmembrane transport	1.73E-03
37	GO:0046685: response to arsenic-containing substance	1.73E-03
38	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.93E-03
39	GO:0090332: stomatal closure	1.93E-03
40	GO:0006032: chitin catabolic process	2.14E-03
41	GO:0006096: glycolytic process	2.24E-03
42	GO:0009073: aromatic amino acid family biosynthetic process	2.36E-03
43	GO:0006108: malate metabolic process	2.82E-03
44	GO:0010075: regulation of meristem growth	2.82E-03
45	GO:0002237: response to molecule of bacterial origin	3.06E-03
46	GO:0009934: regulation of meristem structural organization	3.06E-03
47	GO:0030150: protein import into mitochondrial matrix	3.81E-03
48	GO:0010187: negative regulation of seed germination	3.81E-03
49	GO:0016998: cell wall macromolecule catabolic process	4.35E-03
50	GO:0015992: proton transport	4.35E-03
51	GO:0061077: chaperone-mediated protein folding	4.35E-03
52	GO:0030433: ubiquitin-dependent ERAD pathway	4.63E-03
53	GO:0007005: mitochondrion organization	4.63E-03
54	GO:0009306: protein secretion	5.20E-03
55	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	5.50E-03
56	GO:0055085: transmembrane transport	5.79E-03
57	GO:0000413: protein peptidyl-prolyl isomerization	5.80E-03
58	GO:0010197: polar nucleus fusion	6.11E-03
59	GO:0048868: pollen tube development	6.11E-03
60	GO:0009749: response to glucose	6.74E-03
61	GO:0006891: intra-Golgi vesicle-mediated transport	7.07E-03
62	GO:0080156: mitochondrial mRNA modification	7.07E-03
63	GO:0032502: developmental process	7.40E-03
64	GO:0030163: protein catabolic process	7.73E-03
65	GO:0009567: double fertilization forming a zygote and endosperm	8.08E-03
66	GO:0009816: defense response to bacterium, incompatible interaction	9.50E-03
67	GO:0006950: response to stress	1.02E-02
68	GO:0045454: cell redox homeostasis	1.06E-02
69	GO:0006979: response to oxidative stress	1.06E-02
70	GO:0006886: intracellular protein transport	1.09E-02
71	GO:0030244: cellulose biosynthetic process	1.10E-02
72	GO:0009832: plant-type cell wall biogenesis	1.14E-02
73	GO:0006811: ion transport	1.18E-02
74	GO:0006099: tricarboxylic acid cycle	1.34E-02
75	GO:0015031: protein transport	1.42E-02
76	GO:0006839: mitochondrial transport	1.43E-02
77	GO:0008283: cell proliferation	1.56E-02
78	GO:0051707: response to other organism	1.56E-02
79	GO:0009965: leaf morphogenesis	1.69E-02
80	GO:0006810: transport	1.71E-02
81	GO:0005975: carbohydrate metabolic process	1.78E-02
82	GO:0006486: protein glycosylation	1.92E-02
83	GO:0051603: proteolysis involved in cellular protein catabolic process	1.97E-02
84	GO:0010224: response to UV-B	1.97E-02
85	GO:0009909: regulation of flower development	2.07E-02
86	GO:0009735: response to cytokinin	2.13E-02
87	GO:0009626: plant-type hypersensitive response	2.27E-02
88	GO:0009555: pollen development	2.33E-02
89	GO:0009416: response to light stimulus	2.33E-02
90	GO:0009553: embryo sac development	2.42E-02
91	GO:0009624: response to nematode	2.47E-02
92	GO:0018105: peptidyl-serine phosphorylation	2.52E-02
93	GO:0006633: fatty acid biosynthetic process	3.41E-02
94	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.95E-02
95	GO:0006470: protein dephosphorylation	4.01E-02
96	GO:0009617: response to bacterium	4.14E-02
97	GO:0009414: response to water deprivation	4.58E-02
98	GO:0071555: cell wall organization	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group	0.00E+00
2	GO:0004316: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity	0.00E+00
3	GO:0102132: 3-oxo-pimeloyl-[acp] methyl ester reductase activity	0.00E+00
4	GO:0051082: unfolded protein binding	1.03E-19
5	GO:0004298: threonine-type endopeptidase activity	6.57E-08
6	GO:0005507: copper ion binding	2.78E-05
7	GO:0015288: porin activity	3.18E-05
8	GO:0008308: voltage-gated anion channel activity	4.07E-05
9	GO:0005509: calcium ion binding	5.61E-05
10	GO:0005524: ATP binding	1.13E-04
11	GO:0008233: peptidase activity	1.60E-04
12	GO:0052691: UDP-arabinopyranose mutase activity	1.66E-04
13	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	1.66E-04
14	GO:0004338: glucan exo-1,3-beta-glucosidase activity	1.66E-04
15	GO:0004634: phosphopyruvate hydratase activity	1.66E-04
16	GO:0004618: phosphoglycerate kinase activity	1.66E-04
17	GO:0030246: carbohydrate binding	2.05E-04
18	GO:0004557: alpha-galactosidase activity	2.81E-04
19	GO:0052692: raffinose alpha-galactosidase activity	2.81E-04
20	GO:0003756: protein disulfide isomerase activity	3.11E-04
21	GO:0016866: intramolecular transferase activity	5.42E-04
22	GO:0004470: malic enzyme activity	5.42E-04
23	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	5.42E-04
24	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	5.42E-04
25	GO:0005471: ATP:ADP antiporter activity	6.87E-04
26	GO:0002020: protease binding	6.87E-04
27	GO:0016462: pyrophosphatase activity	8.40E-04
28	GO:1990714: hydroxyproline O-galactosyltransferase activity	8.40E-04
29	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	8.92E-04
30	GO:0050897: cobalt ion binding	1.02E-03
31	GO:0003746: translation elongation factor activity	1.12E-03
32	GO:0004427: inorganic diphosphatase activity	1.17E-03
33	GO:0008135: translation factor activity, RNA binding	1.53E-03
34	GO:0051287: NAD binding	1.71E-03
35	GO:0004568: chitinase activity	2.14E-03
36	GO:0004129: cytochrome-c oxidase activity	2.36E-03
37	GO:0008559: xenobiotic-transporting ATPase activity	2.36E-03
38	GO:0008378: galactosyltransferase activity	2.58E-03
39	GO:0015266: protein channel activity	2.82E-03
40	GO:0031072: heat shock protein binding	2.82E-03
41	GO:0015114: phosphate ion transmembrane transporter activity	2.82E-03
42	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.06E-03
43	GO:0016758: transferase activity, transferring hexosyl groups	3.27E-03
44	GO:0016887: ATPase activity	3.61E-03
45	GO:0004540: ribonuclease activity	4.35E-03
46	GO:0008810: cellulase activity	4.91E-03
47	GO:0016760: cellulose synthase (UDP-forming) activity	4.91E-03
48	GO:0016853: isomerase activity	6.42E-03
49	GO:0000287: magnesium ion binding	7.00E-03
50	GO:0009931: calcium-dependent protein serine/threonine kinase activity	9.87E-03
51	GO:0030247: polysaccharide binding	1.02E-02
52	GO:0004683: calmodulin-dependent protein kinase activity	1.02E-02
53	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.02E-02
54	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.22E-02
55	GO:0003697: single-stranded DNA binding	1.30E-02
56	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.38E-02
57	GO:0009055: electron carrier activity	1.40E-02
58	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.74E-02
59	GO:0031625: ubiquitin protein ligase binding	2.07E-02
60	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.32E-02
61	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.32E-02
62	GO:0005515: protein binding	2.39E-02
63	GO:0008565: protein transporter activity	3.30E-02
64	GO:0005525: GTP binding	3.82E-02
65	GO:0008194: UDP-glycosyltransferase activity	3.95E-02
66	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.32E-02

Rank	GO Term	Adjusted P value
1	GO:0005774: vacuolar membrane	4.42E-22
2	GO:0005788: endoplasmic reticulum lumen	1.58E-12
3	GO:0005773: vacuole	2.56E-11
4	GO:0048046: apoplast	3.01E-11
5	GO:0005618: cell wall	5.27E-11
6	GO:0005783: endoplasmic reticulum	2.11E-08
7	GO:0005839: proteasome core complex	6.57E-08
8	GO:0019773: proteasome core complex, alpha-subunit complex	3.17E-07
9	GO:0005829: cytosol	8.35E-07
10	GO:0005739: mitochondrion	3.15E-06
11	GO:0009506: plasmodesma	5.31E-06
12	GO:0005741: mitochondrial outer membrane	5.85E-06
13	GO:0000502: proteasome complex	8.32E-06
14	GO:0005742: mitochondrial outer membrane translocase complex	4.07E-05
15	GO:0046930: pore complex	4.07E-05
16	GO:0000138: Golgi trans cisterna	6.91E-05
17	GO:0005740: mitochondrial envelope	7.43E-05
18	GO:0009507: chloroplast	1.42E-04
19	GO:0005795: Golgi stack	1.54E-04
20	GO:0000015: phosphopyruvate hydratase complex	1.66E-04
21	GO:0005758: mitochondrial intermembrane space	1.94E-04
22	GO:0005743: mitochondrial inner membrane	2.79E-04
23	GO:0005886: plasma membrane	2.92E-04
24	GO:0009505: plant-type cell wall	6.60E-04
25	GO:0016363: nuclear matrix	9.99E-04
26	GO:0045273: respiratory chain complex II	1.34E-03
27	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	1.34E-03
28	GO:0005794: Golgi apparatus	3.22E-03
29	GO:0022626: cytosolic ribosome	4.05E-03
30	GO:0070469: respiratory chain	4.08E-03
31	GO:0005759: mitochondrial matrix	4.21E-03
32	GO:0016020: membrane	7.30E-03
33	GO:0016592: mediator complex	7.40E-03
34	GO:0000151: ubiquitin ligase complex	1.10E-02
35	GO:0000325: plant-type vacuole	1.22E-02
36	GO:0009536: plastid	1.36E-02
37	GO:0005789: endoplasmic reticulum membrane	1.79E-02
38	GO:0005747: mitochondrial respiratory chain complex I	2.22E-02
39	GO:0005623: cell	2.96E-02
40	GO:0031225: anchored component of membrane	3.63E-02
41	GO:0005622: intracellular	4.12E-02
42	GO:0046658: anchored component of plasma membrane	4.45E-02