co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G29490

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
2	GO:1903648: positive regulation of chlorophyll catabolic process	3.50E-05
3	GO:0010036: response to boron-containing substance	3.50E-05
4	GO:0080029: cellular response to boron-containing substance levels	8.78E-05
5	GO:0048281: inflorescence morphogenesis	1.52E-04
6	GO:0001676: long-chain fatty acid metabolic process	2.25E-04
7	GO:0046713: borate transport	2.25E-04
8	GO:0015700: arsenite transport	2.25E-04
9	GO:0002098: tRNA wobble uridine modification	3.05E-04
10	GO:0000304: response to singlet oxygen	3.89E-04
11	GO:1900057: positive regulation of leaf senescence	6.66E-04
12	GO:0030091: protein repair	7.68E-04
13	GO:0006972: hyperosmotic response	8.71E-04
14	GO:0007338: single fertilization	9.78E-04
15	GO:0046685: response to arsenic-containing substance	9.78E-04
16	GO:0008202: steroid metabolic process	1.09E-03
17	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.09E-03
18	GO:0009089: lysine biosynthetic process via diaminopimelate	1.32E-03
19	GO:0012501: programmed cell death	1.44E-03
20	GO:0070588: calcium ion transmembrane transport	1.84E-03
21	GO:0071456: cellular response to hypoxia	2.56E-03
22	GO:0010227: floral organ abscission	2.71E-03
23	GO:0042631: cellular response to water deprivation	3.20E-03
24	GO:0042391: regulation of membrane potential	3.20E-03
25	GO:0042742: defense response to bacterium	3.42E-03
26	GO:0006635: fatty acid beta-oxidation	3.88E-03
27	GO:0009567: double fertilization forming a zygote and endosperm	4.42E-03
28	GO:0001666: response to hypoxia	4.99E-03
29	GO:0009607: response to biotic stimulus	5.18E-03
30	GO:0032259: methylation	5.21E-03
31	GO:0008219: cell death	5.99E-03
32	GO:0009817: defense response to fungus, incompatible interaction	5.99E-03
33	GO:0009407: toxin catabolic process	6.40E-03
34	GO:0006631: fatty acid metabolic process	7.95E-03
35	GO:0042542: response to hydrogen peroxide	8.18E-03
36	GO:0009636: response to toxic substance	9.12E-03
37	GO:0009738: abscisic acid-activated signaling pathway	9.32E-03
38	GO:0042538: hyperosmotic salinity response	9.86E-03
39	GO:0048367: shoot system development	1.19E-02
40	GO:0055114: oxidation-reduction process	1.23E-02
41	GO:0006468: protein phosphorylation	1.26E-02
42	GO:0010150: leaf senescence	1.96E-02
43	GO:0006810: transport	2.88E-02
44	GO:0006952: defense response	2.98E-02
45	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.19E-02
46	GO:0010200: response to chitin	3.19E-02
47	GO:0006869: lipid transport	3.78E-02
48	GO:0007165: signal transduction	4.07E-02
49	GO:0009751: response to salicylic acid	4.07E-02

Rank	GO Term	Adjusted P value
1	GO:0080138: borate uptake transmembrane transporter activity	0.00E+00
2	GO:0010285: L,L-diaminopimelate aminotransferase activity	3.50E-05
3	GO:1990585: hydroxyproline O-arabinosyltransferase activity	8.78E-05
4	GO:0015105: arsenite transmembrane transporter activity	8.78E-05
5	GO:0032934: sterol binding	8.78E-05
6	GO:0000975: regulatory region DNA binding	1.52E-04
7	GO:0046715: borate transmembrane transporter activity	2.25E-04
8	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	2.25E-04
9	GO:0051213: dioxygenase activity	2.94E-04
10	GO:0003995: acyl-CoA dehydrogenase activity	3.05E-04
11	GO:0005516: calmodulin binding	3.64E-04
12	GO:0003997: acyl-CoA oxidase activity	3.89E-04
13	GO:0008198: ferrous iron binding	3.89E-04
14	GO:0004602: glutathione peroxidase activity	5.70E-04
15	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	5.70E-04
16	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	5.70E-04
17	GO:0004033: aldo-keto reductase (NADP) activity	7.68E-04
18	GO:0008142: oxysterol binding	8.71E-04
19	GO:0005388: calcium-transporting ATPase activity	1.57E-03
20	GO:0004175: endopeptidase activity	1.70E-03
21	GO:0030552: cAMP binding	1.84E-03
22	GO:0030553: cGMP binding	1.84E-03
23	GO:0005216: ion channel activity	2.26E-03
24	GO:0008168: methyltransferase activity	2.88E-03
25	GO:0005249: voltage-gated potassium channel activity	3.20E-03
26	GO:0030551: cyclic nucleotide binding	3.20E-03
27	GO:0050660: flavin adenine dinucleotide binding	3.45E-03
28	GO:0008483: transaminase activity	4.60E-03
29	GO:0015250: water channel activity	4.99E-03
30	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	5.78E-03
31	GO:0004674: protein serine/threonine kinase activity	6.36E-03
32	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	6.61E-03
33	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	7.05E-03
34	GO:0004364: glutathione transferase activity	8.18E-03
35	GO:0005198: structural molecule activity	9.12E-03
36	GO:0008234: cysteine-type peptidase activity	1.11E-02
37	GO:0016874: ligase activity	1.27E-02
38	GO:0016301: kinase activity	1.27E-02
39	GO:0030170: pyridoxal phosphate binding	1.68E-02
40	GO:0004252: serine-type endopeptidase activity	1.68E-02
41	GO:0016491: oxidoreductase activity	2.58E-02
42	GO:0004842: ubiquitin-protein transferase activity	2.71E-02
43	GO:0005524: ATP binding	3.38E-02
44	GO:0009055: electron carrier activity	4.32E-02
45	GO:0046872: metal ion binding	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0016328: lateral plasma membrane	1.52E-04
2	GO:0005887: integral component of plasma membrane	1.01E-03
3	GO:0031966: mitochondrial membrane	9.86E-03
4	GO:0005886: plasma membrane	1.03E-02
5	GO:0005802: trans-Golgi network	1.55E-02
6	GO:0005768: endosome	1.76E-02
7	GO:0005783: endoplasmic reticulum	3.97E-02
8	GO:0005794: Golgi apparatus	4.36E-02
9	GO:0043231: intracellular membrane-bounded organelle	4.41E-02