Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G28940

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009664: plant-type cell wall organization4.69E-07
2GO:0071281: cellular response to iron ion1.58E-04
3GO:0032880: regulation of protein localization5.30E-04
4GO:0098869: cellular oxidant detoxification5.30E-04
5GO:0009808: lignin metabolic process6.94E-04
6GO:0098656: anion transmembrane transport7.80E-04
7GO:0010215: cellulose microfibril organization9.59E-04
8GO:0051026: chiasma assembly9.59E-04
9GO:0071732: cellular response to nitric oxide1.45E-03
10GO:0007131: reciprocal meiotic recombination2.02E-03
11GO:0080092: regulation of pollen tube growth2.02E-03
12GO:0071369: cellular response to ethylene stimulus2.14E-03
13GO:0010089: xylem development2.26E-03
14GO:0010501: RNA secondary structure unwinding2.52E-03
15GO:0016049: cell growth4.53E-03
16GO:0009742: brassinosteroid mediated signaling pathway1.08E-02
17GO:0042744: hydrogen peroxide catabolic process1.33E-02
18GO:0007166: cell surface receptor signaling pathway1.67E-02
19GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.48E-02
20GO:0009873: ethylene-activated signaling pathway3.83E-02
21GO:0035556: intracellular signal transduction4.99E-02
RankGO TermAdjusted P value
1GO:0005199: structural constituent of cell wall1.64E-06
2GO:0015301: anion:anion antiporter activity3.07E-04
3GO:0005452: inorganic anion exchanger activity3.07E-04
4GO:0051020: GTPase binding4.53E-04
5GO:0003678: DNA helicase activity7.80E-04
6GO:0004004: ATP-dependent RNA helicase activity4.37E-03
7GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors5.52E-03
8GO:0008026: ATP-dependent helicase activity1.08E-02
9GO:0004386: helicase activity1.10E-02
10GO:0019843: rRNA binding1.21E-02
11GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.45E-02
12GO:0004601: peroxidase activity2.07E-02
13GO:0052689: carboxylic ester hydrolase activity2.60E-02
14GO:0004722: protein serine/threonine phosphatase activity2.94E-02
RankGO TermAdjusted P value
1GO:0009530: primary cell wall1.18E-04
2GO:0005778: peroxisomal membrane3.62E-03
3GO:0031902: late endosome membrane6.21E-03
4GO:0090406: pollen tube6.57E-03
5GO:0010008: endosome membrane9.29E-03
6GO:0012505: endomembrane system1.01E-02
7GO:0031225: anchored component of membrane1.05E-02
Gene type



Gene DE type