co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G28760

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006695: cholesterol biosynthetic process	4.35E-05
2	GO:0060919: auxin influx	4.35E-05
3	GO:0055069: zinc ion homeostasis	1.17E-04
4	GO:0009855: determination of bilateral symmetry	1.17E-04
5	GO:0006085: acetyl-CoA biosynthetic process	1.61E-04
6	GO:0042549: photosystem II stabilization	2.59E-04
7	GO:0009955: adaxial/abaxial pattern specification	3.11E-04
8	GO:0080060: integument development	3.11E-04
9	GO:0010014: meristem initiation	3.11E-04
10	GO:0009932: cell tip growth	4.82E-04
11	GO:0009657: plastid organization	4.82E-04
12	GO:0033384: geranyl diphosphate biosynthetic process	5.42E-04
13	GO:0045337: farnesyl diphosphate biosynthetic process	5.42E-04
14	GO:0009870: defense response signaling pathway, resistance gene-dependent	6.68E-04
15	GO:0006535: cysteine biosynthetic process from serine	6.68E-04
16	GO:0048829: root cap development	6.68E-04
17	GO:0006415: translational termination	7.34E-04
18	GO:0010072: primary shoot apical meristem specification	7.34E-04
19	GO:0006790: sulfur compound metabolic process	8.01E-04
20	GO:0010207: photosystem II assembly	9.39E-04
21	GO:0090351: seedling development	1.01E-03
22	GO:0046854: phosphatidylinositol phosphorylation	1.01E-03
23	GO:0019344: cysteine biosynthetic process	1.16E-03
24	GO:0007010: cytoskeleton organization	1.16E-03
25	GO:0009944: polarity specification of adaxial/abaxial axis	1.16E-03
26	GO:0003333: amino acid transmembrane transport	1.31E-03
27	GO:0080092: regulation of pollen tube growth	1.39E-03
28	GO:0006730: one-carbon metabolic process	1.39E-03
29	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.54E-03
30	GO:0000271: polysaccharide biosynthetic process	1.73E-03
31	GO:0045489: pectin biosynthetic process	1.82E-03
32	GO:0042128: nitrate assimilation	2.88E-03
33	GO:0030244: cellulose biosynthetic process	3.20E-03
34	GO:0010311: lateral root formation	3.31E-03
35	GO:0006865: amino acid transport	3.64E-03
36	GO:0016051: carbohydrate biosynthetic process	3.76E-03
37	GO:0009853: photorespiration	3.76E-03
38	GO:0009926: auxin polar transport	4.47E-03
39	GO:0009664: plant-type cell wall organization	5.22E-03
40	GO:0006396: RNA processing	7.13E-03
41	GO:0007166: cell surface receptor signaling pathway	1.12E-02
42	GO:0009826: unidimensional cell growth	1.36E-02
43	GO:0006629: lipid metabolic process	2.14E-02
44	GO:0048364: root development	2.21E-02
45	GO:0008152: metabolic process	2.29E-02
46	GO:0009734: auxin-activated signaling pathway	2.73E-02
47	GO:0009416: response to light stimulus	3.22E-02
48	GO:0055085: transmembrane transport	3.82E-02

Rank	GO Term	Adjusted P value
1	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
2	GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	1.67E-05
3	GO:0016463: zinc-exporting ATPase activity	4.35E-05
4	GO:0050017: L-3-cyanoalanine synthase activity	4.35E-05
5	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	4.35E-05
6	GO:0015434: cadmium-transporting ATPase activity	4.35E-05
7	GO:0008551: cadmium-exporting ATPase activity	4.35E-05
8	GO:0016149: translation release factor activity, codon specific	1.17E-04
9	GO:0003878: ATP citrate synthase activity	1.17E-04
10	GO:0010328: auxin influx transmembrane transporter activity	1.61E-04
11	GO:0004124: cysteine synthase activity	3.11E-04
12	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.11E-04
13	GO:0003747: translation release factor activity	5.42E-04
14	GO:0004337: geranyltranstransferase activity	5.42E-04
15	GO:0004161: dimethylallyltranstransferase activity	7.34E-04
16	GO:0005089: Rho guanyl-nucleotide exchange factor activity	7.34E-04
17	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.31E-03
18	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.39E-03
19	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.48E-03
20	GO:0051537: 2 iron, 2 sulfur cluster binding	4.71E-03
21	GO:0015293: symporter activity	4.83E-03
22	GO:0015171: amino acid transmembrane transporter activity	5.88E-03
23	GO:0016758: transferase activity, transferring hexosyl groups	8.02E-03
24	GO:0016829: lyase activity	8.63E-03
25	GO:0030170: pyridoxal phosphate binding	8.79E-03
26	GO:0046872: metal ion binding	9.25E-03
27	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	9.74E-03
28	GO:0008017: microtubule binding	1.06E-02
29	GO:0005524: ATP binding	1.30E-02
30	GO:0043531: ADP binding	1.49E-02
31	GO:0016787: hydrolase activity	1.66E-02
32	GO:0004871: signal transducer activity	1.91E-02
33	GO:0008289: lipid binding	2.71E-02
34	GO:0016887: ATPase activity	2.92E-02
35	GO:0016740: transferase activity	3.71E-02
36	GO:0004674: protein serine/threonine kinase activity	3.82E-02
37	GO:0005507: copper ion binding	4.14E-02

Rank	GO Term	Adjusted P value
1	GO:0009346: citrate lyase complex	1.17E-04
2	GO:0030659: cytoplasmic vesicle membrane	9.39E-04
3	GO:0005886: plasma membrane	1.11E-03
4	GO:0009523: photosystem II	2.00E-03
5	GO:0031225: anchored component of membrane	5.96E-03
6	GO:0005759: mitochondrial matrix	9.58E-03
7	GO:0000139: Golgi membrane	1.05E-02
8	GO:0046658: anchored component of plasma membrane	1.25E-02
9	GO:0005874: microtubule	1.58E-02
10	GO:0009535: chloroplast thylakoid membrane	1.74E-02
11	GO:0005774: vacuolar membrane	2.69E-02
12	GO:0009534: chloroplast thylakoid	3.69E-02
13	GO:0005802: trans-Golgi network	4.51E-02
14	GO:0005768: endosome	4.94E-02