co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G28450

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002191: cap-dependent translational initiation	0.00E+00
2	GO:0039694: viral RNA genome replication	0.00E+00
3	GO:0000470: maturation of LSU-rRNA	9.67E-07
4	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	3.88E-05
5	GO:0070475: rRNA base methylation	6.95E-05
6	GO:0007276: gamete generation	1.05E-04
7	GO:0000460: maturation of 5.8S rRNA	1.45E-04
8	GO:1900864: mitochondrial RNA modification	1.45E-04
9	GO:0001731: formation of translation preinitiation complex	2.34E-04
10	GO:1900865: chloroplast RNA modification	5.49E-04
11	GO:0010582: floral meristem determinacy	7.29E-04
12	GO:0006446: regulation of translational initiation	8.55E-04
13	GO:0000027: ribosomal large subunit assembly	1.05E-03
14	GO:0051302: regulation of cell division	1.12E-03
15	GO:0010501: RNA secondary structure unwinding	1.57E-03
16	GO:0009407: toxin catabolic process	3.09E-03
17	GO:0006099: tricarboxylic acid cycle	3.50E-03
18	GO:0000154: rRNA modification	4.37E-03
19	GO:0009636: response to toxic substance	4.37E-03
20	GO:0009414: response to water deprivation	6.50E-03
21	GO:0006413: translational initiation	8.79E-03
22	GO:0046686: response to cadmium ion	1.04E-02
23	GO:0045454: cell redox homeostasis	1.66E-02
24	GO:0032259: methylation	1.87E-02
25	GO:0006397: mRNA processing	1.99E-02
26	GO:0006457: protein folding	3.49E-02

Rank	GO Term	Adjusted P value
1	GO:0098808: mRNA cap binding	0.00E+00
2	GO:0050220: prostaglandin-E synthase activity	0.00E+00
3	GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity	1.48E-05
4	GO:0042134: rRNA primary transcript binding	1.48E-05
5	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	3.88E-05
6	GO:0004776: succinate-CoA ligase (GDP-forming) activity	3.88E-05
7	GO:0043021: ribonucleoprotein complex binding	3.88E-05
8	GO:0004775: succinate-CoA ligase (ADP-forming) activity	3.88E-05
9	GO:0008143: poly(A) binding	3.32E-04
10	GO:0043295: glutathione binding	3.32E-04
11	GO:0030515: snoRNA binding	3.32E-04
12	GO:0008026: ATP-dependent helicase activity	4.36E-04
13	GO:0003678: DNA helicase activity	4.93E-04
14	GO:0001054: RNA polymerase I activity	6.67E-04
15	GO:0003723: RNA binding	2.40E-03
16	GO:0004004: ATP-dependent RNA helicase activity	2.70E-03
17	GO:0004364: glutathione transferase activity	3.93E-03
18	GO:0005507: copper ion binding	4.69E-03
19	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.95E-03
20	GO:0015035: protein disulfide oxidoreductase activity	6.44E-03
21	GO:0004386: helicase activity	6.70E-03
22	GO:0003729: mRNA binding	9.92E-03
23	GO:0003743: translation initiation factor activity	1.03E-02
24	GO:0008168: methyltransferase activity	1.22E-02
25	GO:0009055: electron carrier activity	2.02E-02
26	GO:0000166: nucleotide binding	2.90E-02
27	GO:0005524: ATP binding	2.92E-02
28	GO:0016740: transferase activity	3.34E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0005730: nucleolus	1.13E-09
3	GO:0030687: preribosome, large subunit precursor	2.01E-06
4	GO:0070545: PeBoW complex	3.88E-05
5	GO:0016282: eukaryotic 43S preinitiation complex	2.34E-04
6	GO:0031428: box C/D snoRNP complex	2.34E-04
7	GO:0033290: eukaryotic 48S preinitiation complex	2.82E-04
8	GO:0016272: prefoldin complex	2.82E-04
9	GO:0010494: cytoplasmic stress granule	4.93E-04
10	GO:0005736: DNA-directed RNA polymerase I complex	4.93E-04
11	GO:0032040: small-subunit processome	7.29E-04
12	GO:0005634: nucleus	9.24E-04
13	GO:0043234: protein complex	9.85E-04
14	GO:0005829: cytosol	1.36E-03
15	GO:0005618: cell wall	4.92E-03
16	GO:0005759: mitochondrial matrix	8.64E-03
17	GO:0046658: anchored component of plasma membrane	1.12E-02