GO Enrichment Analysis of Co-expressed Genes with
AT4G27820
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006968: cellular defense response | 0.00E+00 |
| 2 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 3 | GO:1903508: positive regulation of nucleic acid-templated transcription | 0.00E+00 |
| 4 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 5 | GO:1903428: positive regulation of reactive oxygen species biosynthetic process | 0.00E+00 |
| 6 | GO:0070584: mitochondrion morphogenesis | 0.00E+00 |
| 7 | GO:0009768: photosynthesis, light harvesting in photosystem I | 8.63E-22 |
| 8 | GO:0015979: photosynthesis | 1.30E-15 |
| 9 | GO:0018298: protein-chromophore linkage | 7.16E-14 |
| 10 | GO:0010218: response to far red light | 5.42E-08 |
| 11 | GO:0009637: response to blue light | 7.98E-08 |
| 12 | GO:0010114: response to red light | 1.61E-07 |
| 13 | GO:0009645: response to low light intensity stimulus | 1.91E-07 |
| 14 | GO:0009644: response to high light intensity | 7.65E-06 |
| 15 | GO:0016926: protein desumoylation | 1.01E-05 |
| 16 | GO:0009769: photosynthesis, light harvesting in photosystem II | 3.00E-05 |
| 17 | GO:0010196: nonphotochemical quenching | 3.00E-05 |
| 18 | GO:0000025: maltose catabolic process | 7.90E-05 |
| 19 | GO:0005983: starch catabolic process | 1.25E-04 |
| 20 | GO:0010207: photosystem II assembly | 1.65E-04 |
| 21 | GO:0035304: regulation of protein dephosphorylation | 1.89E-04 |
| 22 | GO:0030259: lipid glycosylation | 1.89E-04 |
| 23 | GO:0051262: protein tetramerization | 1.89E-04 |
| 24 | GO:0031936: negative regulation of chromatin silencing | 4.58E-04 |
| 25 | GO:0010071: root meristem specification | 4.58E-04 |
| 26 | GO:0044211: CTP salvage | 4.58E-04 |
| 27 | GO:0007276: gamete generation | 4.58E-04 |
| 28 | GO:0044206: UMP salvage | 6.09E-04 |
| 29 | GO:0030104: water homeostasis | 6.09E-04 |
| 30 | GO:0006646: phosphatidylethanolamine biosynthetic process | 6.09E-04 |
| 31 | GO:1903830: magnesium ion transmembrane transport | 6.09E-04 |
| 32 | GO:0009765: photosynthesis, light harvesting | 6.09E-04 |
| 33 | GO:2000306: positive regulation of photomorphogenesis | 6.09E-04 |
| 34 | GO:0010600: regulation of auxin biosynthetic process | 6.09E-04 |
| 35 | GO:0043097: pyrimidine nucleoside salvage | 7.72E-04 |
| 36 | GO:0031365: N-terminal protein amino acid modification | 7.72E-04 |
| 37 | GO:0009735: response to cytokinin | 8.73E-04 |
| 38 | GO:0006206: pyrimidine nucleobase metabolic process | 9.42E-04 |
| 39 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 9.42E-04 |
| 40 | GO:0009635: response to herbicide | 9.42E-04 |
| 41 | GO:0010405: arabinogalactan protein metabolic process | 9.42E-04 |
| 42 | GO:0042549: photosystem II stabilization | 9.42E-04 |
| 43 | GO:0045962: positive regulation of development, heterochronic | 9.42E-04 |
| 44 | GO:0009416: response to light stimulus | 9.97E-04 |
| 45 | GO:0009409: response to cold | 1.04E-03 |
| 46 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.12E-03 |
| 47 | GO:0080111: DNA demethylation | 1.31E-03 |
| 48 | GO:0051510: regulation of unidimensional cell growth | 1.31E-03 |
| 49 | GO:0015693: magnesium ion transport | 1.31E-03 |
| 50 | GO:0010161: red light signaling pathway | 1.31E-03 |
| 51 | GO:0007050: cell cycle arrest | 1.31E-03 |
| 52 | GO:0009704: de-etiolation | 1.51E-03 |
| 53 | GO:0010928: regulation of auxin mediated signaling pathway | 1.51E-03 |
| 54 | GO:0010497: plasmodesmata-mediated intercellular transport | 1.72E-03 |
| 55 | GO:0007186: G-protein coupled receptor signaling pathway | 1.72E-03 |
| 56 | GO:0010206: photosystem II repair | 1.95E-03 |
| 57 | GO:0090333: regulation of stomatal closure | 1.95E-03 |
| 58 | GO:0000373: Group II intron splicing | 1.95E-03 |
| 59 | GO:0006812: cation transport | 2.12E-03 |
| 60 | GO:0007346: regulation of mitotic cell cycle | 2.18E-03 |
| 61 | GO:0010205: photoinhibition | 2.18E-03 |
| 62 | GO:0010018: far-red light signaling pathway | 2.18E-03 |
| 63 | GO:1900865: chloroplast RNA modification | 2.18E-03 |
| 64 | GO:0009585: red, far-red light phototransduction | 2.27E-03 |
| 65 | GO:0048829: root cap development | 2.41E-03 |
| 66 | GO:0016441: posttranscriptional gene silencing | 2.41E-03 |
| 67 | GO:0019684: photosynthesis, light reaction | 2.66E-03 |
| 68 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.66E-03 |
| 69 | GO:0006006: glucose metabolic process | 3.18E-03 |
| 70 | GO:0018107: peptidyl-threonine phosphorylation | 3.18E-03 |
| 71 | GO:0009767: photosynthetic electron transport chain | 3.18E-03 |
| 72 | GO:0042753: positive regulation of circadian rhythm | 4.02E-03 |
| 73 | GO:0006071: glycerol metabolic process | 4.02E-03 |
| 74 | GO:0009058: biosynthetic process | 4.23E-03 |
| 75 | GO:0080147: root hair cell development | 4.31E-03 |
| 76 | GO:0009845: seed germination | 4.34E-03 |
| 77 | GO:0051302: regulation of cell division | 4.61E-03 |
| 78 | GO:0006874: cellular calcium ion homeostasis | 4.61E-03 |
| 79 | GO:0009269: response to desiccation | 4.92E-03 |
| 80 | GO:0010017: red or far-red light signaling pathway | 5.24E-03 |
| 81 | GO:0009686: gibberellin biosynthetic process | 5.56E-03 |
| 82 | GO:0071215: cellular response to abscisic acid stimulus | 5.56E-03 |
| 83 | GO:0010214: seed coat development | 5.89E-03 |
| 84 | GO:0010501: RNA secondary structure unwinding | 6.57E-03 |
| 85 | GO:0006814: sodium ion transport | 7.28E-03 |
| 86 | GO:0031047: gene silencing by RNA | 8.39E-03 |
| 87 | GO:1901657: glycosyl compound metabolic process | 8.77E-03 |
| 88 | GO:0009639: response to red or far red light | 9.16E-03 |
| 89 | GO:0016125: sterol metabolic process | 9.16E-03 |
| 90 | GO:0009615: response to virus | 1.04E-02 |
| 91 | GO:0016126: sterol biosynthetic process | 1.04E-02 |
| 92 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.10E-02 |
| 93 | GO:0006974: cellular response to DNA damage stimulus | 1.12E-02 |
| 94 | GO:0015995: chlorophyll biosynthetic process | 1.16E-02 |
| 95 | GO:0016311: dephosphorylation | 1.21E-02 |
| 96 | GO:0009813: flavonoid biosynthetic process | 1.29E-02 |
| 97 | GO:0006811: ion transport | 1.34E-02 |
| 98 | GO:0009631: cold acclimation | 1.38E-02 |
| 99 | GO:0010119: regulation of stomatal movement | 1.38E-02 |
| 100 | GO:0007568: aging | 1.38E-02 |
| 101 | GO:0045087: innate immune response | 1.48E-02 |
| 102 | GO:0016051: carbohydrate biosynthetic process | 1.48E-02 |
| 103 | GO:0006629: lipid metabolic process | 1.57E-02 |
| 104 | GO:0006508: proteolysis | 1.58E-02 |
| 105 | GO:0030001: metal ion transport | 1.62E-02 |
| 106 | GO:0051707: response to other organism | 1.77E-02 |
| 107 | GO:0008643: carbohydrate transport | 1.87E-02 |
| 108 | GO:0009965: leaf morphogenesis | 1.92E-02 |
| 109 | GO:0042538: hyperosmotic salinity response | 2.08E-02 |
| 110 | GO:0043086: negative regulation of catalytic activity | 2.46E-02 |
| 111 | GO:0009740: gibberellic acid mediated signaling pathway | 2.69E-02 |
| 112 | GO:0009624: response to nematode | 2.81E-02 |
| 113 | GO:0018105: peptidyl-serine phosphorylation | 2.87E-02 |
| 114 | GO:0055085: transmembrane transport | 3.54E-02 |
| 115 | GO:0010228: vegetative to reproductive phase transition of meristem | 4.28E-02 |
| 116 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.49E-02 |
| 117 | GO:0008380: RNA splicing | 4.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004567: beta-mannosidase activity | 0.00E+00 |
| 2 | GO:0080082: esculin beta-glucosidase activity | 0.00E+00 |
| 3 | GO:0015038: glutathione disulfide oxidoreductase activity | 0.00E+00 |
| 4 | GO:0009899: ent-kaurene synthase activity | 0.00E+00 |
| 5 | GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity | 0.00E+00 |
| 6 | GO:0047668: amygdalin beta-glucosidase activity | 0.00E+00 |
| 7 | GO:0080083: beta-gentiobiose beta-glucosidase activity | 0.00E+00 |
| 8 | GO:0004306: ethanolamine-phosphate cytidylyltransferase activity | 0.00E+00 |
| 9 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 10 | GO:0090711: FMN hydrolase activity | 0.00E+00 |
| 11 | GO:0031409: pigment binding | 9.39E-20 |
| 12 | GO:0016168: chlorophyll binding | 2.13E-16 |
| 13 | GO:0016929: SUMO-specific protease activity | 1.01E-05 |
| 14 | GO:0004134: 4-alpha-glucanotransferase activity | 7.90E-05 |
| 15 | GO:0016906: sterol 3-beta-glucosyltransferase activity | 7.90E-05 |
| 16 | GO:0005227: calcium activated cation channel activity | 7.90E-05 |
| 17 | GO:0080079: cellobiose glucosidase activity | 7.90E-05 |
| 18 | GO:0102203: brassicasterol glucosyltransferase activity | 7.90E-05 |
| 19 | GO:0102202: soladodine glucosyltransferase activity | 7.90E-05 |
| 20 | GO:0010242: oxygen evolving activity | 7.90E-05 |
| 21 | GO:0004175: endopeptidase activity | 1.65E-04 |
| 22 | GO:0016630: protochlorophyllide reductase activity | 1.89E-04 |
| 23 | GO:0004930: G-protein coupled receptor activity | 6.09E-04 |
| 24 | GO:0009011: starch synthase activity | 6.09E-04 |
| 25 | GO:0004845: uracil phosphoribosyltransferase activity | 6.09E-04 |
| 26 | GO:0004556: alpha-amylase activity | 9.42E-04 |
| 27 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 9.42E-04 |
| 28 | GO:0015562: efflux transmembrane transporter activity | 9.42E-04 |
| 29 | GO:0004012: phospholipid-translocating ATPase activity | 1.12E-03 |
| 30 | GO:0005261: cation channel activity | 1.12E-03 |
| 31 | GO:0004849: uridine kinase activity | 1.12E-03 |
| 32 | GO:0008235: metalloexopeptidase activity | 1.31E-03 |
| 33 | GO:0003993: acid phosphatase activity | 1.38E-03 |
| 34 | GO:0003724: RNA helicase activity | 1.72E-03 |
| 35 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 1.95E-03 |
| 36 | GO:0016787: hydrolase activity | 2.31E-03 |
| 37 | GO:0008234: cysteine-type peptidase activity | 2.51E-03 |
| 38 | GO:0004177: aminopeptidase activity | 2.66E-03 |
| 39 | GO:0047372: acylglycerol lipase activity | 2.66E-03 |
| 40 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 3.18E-03 |
| 41 | GO:0004022: alcohol dehydrogenase (NAD) activity | 3.18E-03 |
| 42 | GO:0005315: inorganic phosphate transmembrane transporter activity | 3.18E-03 |
| 43 | GO:0015095: magnesium ion transmembrane transporter activity | 3.18E-03 |
| 44 | GO:0008266: poly(U) RNA binding | 3.45E-03 |
| 45 | GO:0005217: intracellular ligand-gated ion channel activity | 3.73E-03 |
| 46 | GO:0004970: ionotropic glutamate receptor activity | 3.73E-03 |
| 47 | GO:0046872: metal ion binding | 4.41E-03 |
| 48 | GO:0005216: ion channel activity | 4.61E-03 |
| 49 | GO:0008324: cation transmembrane transporter activity | 4.61E-03 |
| 50 | GO:0008514: organic anion transmembrane transporter activity | 5.89E-03 |
| 51 | GO:0046873: metal ion transmembrane transporter activity | 6.92E-03 |
| 52 | GO:0008536: Ran GTPase binding | 6.92E-03 |
| 53 | GO:0000287: magnesium ion binding | 8.39E-03 |
| 54 | GO:0003682: chromatin binding | 9.04E-03 |
| 55 | GO:0008375: acetylglucosaminyltransferase activity | 1.12E-02 |
| 56 | GO:0004004: ATP-dependent RNA helicase activity | 1.16E-02 |
| 57 | GO:0102483: scopolin beta-glucosidase activity | 1.16E-02 |
| 58 | GO:0005509: calcium ion binding | 1.19E-02 |
| 59 | GO:0008422: beta-glucosidase activity | 1.57E-02 |
| 60 | GO:0042393: histone binding | 1.62E-02 |
| 61 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.87E-02 |
| 62 | GO:0043621: protein self-association | 1.87E-02 |
| 63 | GO:0015293: symporter activity | 1.92E-02 |
| 64 | GO:0005198: structural molecule activity | 1.92E-02 |
| 65 | GO:0005515: protein binding | 1.96E-02 |
| 66 | GO:0004672: protein kinase activity | 2.15E-02 |
| 67 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.63E-02 |
| 68 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.63E-02 |
| 69 | GO:0015035: protein disulfide oxidoreductase activity | 2.87E-02 |
| 70 | GO:0008026: ATP-dependent helicase activity | 2.93E-02 |
| 71 | GO:0004674: protein serine/threonine kinase activity | 3.18E-02 |
| 72 | GO:0016758: transferase activity, transferring hexosyl groups | 3.23E-02 |
| 73 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.36E-02 |
| 74 | GO:0004252: serine-type endopeptidase activity | 3.55E-02 |
| 75 | GO:0015144: carbohydrate transmembrane transporter activity | 3.75E-02 |
| 76 | GO:0046910: pectinesterase inhibitor activity | 3.94E-02 |
| 77 | GO:0015297: antiporter activity | 4.01E-02 |
| 78 | GO:0005351: sugar:proton symporter activity | 4.08E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009783: photosystem II antenna complex | 0.00E+00 |
| 2 | GO:0009579: thylakoid | 4.14E-19 |
| 3 | GO:0009534: chloroplast thylakoid | 4.48E-19 |
| 4 | GO:0010287: plastoglobule | 9.65E-19 |
| 5 | GO:0009522: photosystem I | 1.15E-17 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 2.42E-17 |
| 7 | GO:0030076: light-harvesting complex | 5.48E-15 |
| 8 | GO:0009941: chloroplast envelope | 2.03E-13 |
| 9 | GO:0009507: chloroplast | 3.28E-10 |
| 10 | GO:0009523: photosystem II | 5.57E-09 |
| 11 | GO:0016021: integral component of membrane | 4.16E-07 |
| 12 | GO:0009517: PSII associated light-harvesting complex II | 6.01E-06 |
| 13 | GO:0016020: membrane | 3.23E-05 |
| 14 | GO:0009538: photosystem I reaction center | 3.94E-05 |
| 15 | GO:0031977: thylakoid lumen | 1.31E-04 |
| 16 | GO:0030095: chloroplast photosystem II | 1.65E-04 |
| 17 | GO:0042651: thylakoid membrane | 2.59E-04 |
| 18 | GO:0009654: photosystem II oxygen evolving complex | 2.59E-04 |
| 19 | GO:0009543: chloroplast thylakoid lumen | 4.76E-04 |
| 20 | GO:0019898: extrinsic component of membrane | 5.39E-04 |
| 21 | GO:0055035: plastid thylakoid membrane | 7.72E-04 |
| 22 | GO:0009533: chloroplast stromal thylakoid | 1.31E-03 |
| 23 | GO:0009501: amyloplast | 1.51E-03 |
| 24 | GO:0009570: chloroplast stroma | 1.55E-03 |
| 25 | GO:0005680: anaphase-promoting complex | 1.95E-03 |
| 26 | GO:0010494: cytoplasmic stress granule | 1.95E-03 |
| 27 | GO:0031307: integral component of mitochondrial outer membrane | 2.92E-03 |
| 28 | GO:0009504: cell plate | 7.64E-03 |
| 29 | GO:0009707: chloroplast outer membrane | 1.25E-02 |
| 30 | GO:0005819: spindle | 1.57E-02 |
| 31 | GO:0005654: nucleoplasm | 3.23E-02 |