Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G27657

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010423: negative regulation of brassinosteroid biosynthetic process0.00E+00
2GO:0018316: peptide cross-linking via L-cystine0.00E+00
3GO:0009264: deoxyribonucleotide catabolic process0.00E+00
4GO:0009963: positive regulation of flavonoid biosynthetic process6.79E-07
5GO:0051555: flavonol biosynthetic process2.38E-05
6GO:0009698: phenylpropanoid metabolic process2.85E-05
7GO:0019605: butyrate metabolic process3.25E-05
8GO:0071454: cellular response to anoxia3.25E-05
9GO:0006083: acetate metabolic process3.25E-05
10GO:0048438: floral whorl development3.25E-05
11GO:0031539: positive regulation of anthocyanin metabolic process3.25E-05
12GO:0009225: nucleotide-sugar metabolic process5.21E-05
13GO:0019388: galactose catabolic process8.18E-05
14GO:0010220: positive regulation of vernalization response8.18E-05
15GO:1900386: positive regulation of flavonol biosynthetic process8.18E-05
16GO:0080153: negative regulation of reductive pentose-phosphate cycle8.18E-05
17GO:0010253: UDP-rhamnose biosynthetic process1.42E-04
18GO:0040009: regulation of growth rate1.42E-04
19GO:0009590: detection of gravity2.11E-04
20GO:0042823: pyridoxal phosphate biosynthetic process2.11E-04
21GO:0034613: cellular protein localization2.85E-04
22GO:0006097: glyoxylate cycle3.65E-04
23GO:0009813: flavonoid biosynthetic process3.67E-04
24GO:0080167: response to karrikin3.76E-04
25GO:0010218: response to far red light3.85E-04
26GO:0006796: phosphate-containing compound metabolic process4.48E-04
27GO:0010315: auxin efflux4.48E-04
28GO:0000060: protein import into nucleus, translocation4.48E-04
29GO:0010076: maintenance of floral meristem identity5.36E-04
30GO:0010077: maintenance of inflorescence meristem identity5.36E-04
31GO:0030154: cell differentiation5.64E-04
32GO:0009926: auxin polar transport5.65E-04
33GO:0006629: lipid metabolic process6.15E-04
34GO:0005978: glycogen biosynthetic process7.22E-04
35GO:0009787: regulation of abscisic acid-activated signaling pathway7.22E-04
36GO:0010224: response to UV-B7.76E-04
37GO:0010099: regulation of photomorphogenesis8.20E-04
38GO:0009909: regulation of flower development8.28E-04
39GO:0010018: far-red light signaling pathway1.02E-03
40GO:0000272: polysaccharide catabolic process1.24E-03
41GO:0048229: gametophyte development1.24E-03
42GO:0016925: protein sumoylation1.36E-03
43GO:0010582: floral meristem determinacy1.36E-03
44GO:0006006: glucose metabolic process1.47E-03
45GO:0010223: secondary shoot formation1.60E-03
46GO:0009934: regulation of meristem structural organization1.60E-03
47GO:0034605: cellular response to heat1.60E-03
48GO:0019253: reductive pentose-phosphate cycle1.60E-03
49GO:0019853: L-ascorbic acid biosynthetic process1.72E-03
50GO:0007623: circadian rhythm1.77E-03
51GO:0042753: positive regulation of circadian rhythm1.85E-03
52GO:0009739: response to gibberellin1.98E-03
53GO:0006487: protein N-linked glycosylation1.99E-03
54GO:0019915: lipid storage2.26E-03
55GO:0010017: red or far-red light signaling pathway2.40E-03
56GO:0009411: response to UV2.55E-03
57GO:0040007: growth2.55E-03
58GO:0042127: regulation of cell proliferation2.69E-03
59GO:0010584: pollen exine formation2.69E-03
60GO:0019722: calcium-mediated signaling2.69E-03
61GO:0070417: cellular response to cold2.84E-03
62GO:0016117: carotenoid biosynthetic process2.84E-03
63GO:0009723: response to ethylene3.14E-03
64GO:0009958: positive gravitropism3.15E-03
65GO:0045489: pectin biosynthetic process3.15E-03
66GO:0019252: starch biosynthetic process3.47E-03
67GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.63E-03
68GO:0010252: auxin homeostasis4.14E-03
69GO:0007267: cell-cell signaling4.32E-03
70GO:0008152: metabolic process5.44E-03
71GO:0010311: lateral root formation5.80E-03
72GO:0010114: response to red light7.87E-03
73GO:0009744: response to sucrose7.87E-03
74GO:0009640: photomorphogenesis7.87E-03
75GO:0009416: response to light stimulus8.75E-03
76GO:0000165: MAPK cascade8.99E-03
77GO:0031347: regulation of defense response8.99E-03
78GO:0009585: red, far-red light phototransduction9.69E-03
79GO:0045893: positive regulation of transcription, DNA-templated1.01E-02
80GO:0009740: gibberellic acid mediated signaling pathway1.19E-02
81GO:0009742: brassinosteroid mediated signaling pathway1.29E-02
82GO:0000398: mRNA splicing, via spliceosome1.37E-02
83GO:0009845: seed germination1.54E-02
84GO:0006413: translational initiation1.74E-02
85GO:0071555: cell wall organization1.78E-02
86GO:0009733: response to auxin2.00E-02
87GO:0045944: positive regulation of transcription from RNA polymerase II promoter2.36E-02
88GO:0005975: carbohydrate metabolic process2.70E-02
89GO:0045454: cell redox homeostasis3.31E-02
90GO:0009737: response to abscisic acid3.79E-02
91GO:0009751: response to salicylic acid3.80E-02
92GO:0009753: response to jasmonic acid4.04E-02
93GO:0006357: regulation of transcription from RNA polymerase II promoter4.69E-02
94GO:0009734: auxin-activated signaling pathway4.90E-02
RankGO TermAdjusted P value
1GO:0047213: anthocyanidin 3-O-glucosyltransferase activity0.00E+00
2GO:0047918: GDP-mannose 3,5-epimerase activity0.00E+00
3GO:0047760: butyrate-CoA ligase activity3.25E-05
4GO:0035614: snRNA stem-loop binding3.25E-05
5GO:0003987: acetate-CoA ligase activity3.25E-05
6GO:0004614: phosphoglucomutase activity8.18E-05
7GO:0030619: U1 snRNA binding8.18E-05
8GO:0004566: beta-glucuronidase activity8.18E-05
9GO:0016868: intramolecular transferase activity, phosphotransferases8.18E-05
10GO:0008460: dTDP-glucose 4,6-dehydratase activity8.18E-05
11GO:0010280: UDP-L-rhamnose synthase activity8.18E-05
12GO:0050377: UDP-glucose 4,6-dehydratase activity8.18E-05
13GO:0008253: 5'-nucleotidase activity1.42E-04
14GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity2.11E-04
15GO:0045430: chalcone isomerase activity2.85E-04
16GO:0031386: protein tag3.65E-04
17GO:0016208: AMP binding4.48E-04
18GO:0016161: beta-amylase activity5.36E-04
19GO:0003824: catalytic activity5.71E-04
20GO:0102425: myricetin 3-O-glucosyltransferase activity6.27E-04
21GO:0102360: daphnetin 3-O-glucosyltransferase activity6.27E-04
22GO:0004427: inorganic diphosphatase activity6.27E-04
23GO:0047893: flavonol 3-O-glucosyltransferase activity7.22E-04
24GO:0016207: 4-coumarate-CoA ligase activity9.20E-04
25GO:0009672: auxin:proton symporter activity1.02E-03
26GO:0047372: acylglycerol lipase activity1.24E-03
27GO:0004860: protein kinase inhibitor activity1.24E-03
28GO:0010329: auxin efflux transmembrane transporter activity1.47E-03
29GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.47E-03
30GO:0008194: UDP-glycosyltransferase activity1.98E-03
31GO:0035251: UDP-glucosyltransferase activity2.26E-03
32GO:0000287: magnesium ion binding2.67E-03
33GO:0046982: protein heterodimerization activity2.67E-03
34GO:0016853: isomerase activity3.31E-03
35GO:0008375: acetylglucosaminyltransferase activity5.04E-03
36GO:0016798: hydrolase activity, acting on glycosyl bonds5.22E-03
37GO:0004806: triglyceride lipase activity5.22E-03
38GO:0051287: NAD binding8.99E-03
39GO:0003690: double-stranded DNA binding9.93E-03
40GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.11E-02
41GO:0004650: polygalacturonase activity1.17E-02
42GO:0080043: quercetin 3-O-glucosyltransferase activity1.17E-02
43GO:0080044: quercetin 7-O-glucosyltransferase activity1.17E-02
44GO:0016874: ligase activity1.19E-02
45GO:0016757: transferase activity, transferring glycosyl groups1.43E-02
46GO:0016758: transferase activity, transferring hexosyl groups1.43E-02
47GO:0016829: lyase activity1.54E-02
48GO:0003743: translation initiation factor activity2.04E-02
49GO:0043565: sequence-specific DNA binding2.39E-02
50GO:0003700: transcription factor activity, sequence-specific DNA binding3.04E-02
51GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.31E-02
52GO:0042803: protein homodimerization activity3.42E-02
53GO:0004871: signal transducer activity3.42E-02
54GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.57E-02
RankGO TermAdjusted P value
1GO:0005685: U1 snRNP9.20E-04
2GO:0005765: lysosomal membrane1.24E-03
3GO:0043234: protein complex1.85E-03
4GO:0010319: stromule4.32E-03
5GO:0005681: spliceosomal complex1.09E-02
6GO:0031225: anchored component of membrane1.37E-02
7GO:0005774: vacuolar membrane1.46E-02
8GO:0005623: cell1.48E-02
9GO:0009505: plant-type cell wall2.23E-02
10GO:0005829: cytosol3.49E-02
11GO:0043231: intracellular membrane-bounded organelle4.12E-02
Gene type



Gene DE type