co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G27500

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
2	GO:0046686: response to cadmium ion	1.90E-08
3	GO:0080120: CAAX-box protein maturation	2.64E-05
4	GO:0071586: CAAX-box protein processing	2.64E-05
5	GO:0006422: aspartyl-tRNA aminoacylation	2.64E-05
6	GO:1901703: protein localization involved in auxin polar transport	6.72E-05
7	GO:0006423: cysteinyl-tRNA aminoacylation	6.72E-05
8	GO:0080055: low-affinity nitrate transport	1.18E-04
9	GO:0071494: cellular response to UV-C	1.18E-04
10	GO:0009407: toxin catabolic process	2.97E-04
11	GO:0018279: protein N-linked glycosylation via asparagine	3.07E-04
12	GO:0009228: thiamine biosynthetic process	3.78E-04
13	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	5.30E-04
14	GO:0009819: drought recovery	6.10E-04
15	GO:0009699: phenylpropanoid biosynthetic process	6.94E-04
16	GO:0015706: nitrate transport	1.15E-03
17	GO:0071365: cellular response to auxin stimulus	1.15E-03
18	GO:0048467: gynoecium development	1.35E-03
19	GO:0000162: tryptophan biosynthetic process	1.56E-03
20	GO:0034976: response to endoplasmic reticulum stress	1.56E-03
21	GO:2000377: regulation of reactive oxygen species metabolic process	1.67E-03
22	GO:0010073: meristem maintenance	1.78E-03
23	GO:0045454: cell redox homeostasis	3.10E-03
24	GO:0031047: gene silencing by RNA	3.19E-03
25	GO:0006974: cellular response to DNA damage stimulus	4.22E-03
26	GO:0042128: nitrate assimilation	4.22E-03
27	GO:0010043: response to zinc ion	5.18E-03
28	GO:0006099: tricarboxylic acid cycle	5.69E-03
29	GO:0009636: response to toxic substance	7.12E-03
30	GO:0009664: plant-type cell wall organization	7.69E-03
31	GO:0006857: oligopeptide transport	8.48E-03
32	GO:0006457: protein folding	8.72E-03
33	GO:0006096: glycolytic process	9.08E-03
34	GO:0016569: covalent chromatin modification	9.92E-03
35	GO:0009414: response to water deprivation	1.34E-02
36	GO:0010150: leaf senescence	1.52E-02
37	GO:0009826: unidimensional cell growth	2.02E-02
38	GO:0042254: ribosome biogenesis	2.10E-02
39	GO:0048366: leaf development	2.33E-02
40	GO:0016192: vesicle-mediated transport	2.51E-02
41	GO:0006886: intracellular protein transport	2.81E-02
42	GO:0032259: methylation	3.10E-02
43	GO:0006281: DNA repair	3.19E-02
44	GO:0006397: mRNA processing	3.29E-02
45	GO:0048364: root development	3.29E-02
46	GO:0050832: defense response to fungus	4.06E-02
47	GO:0009735: response to cytokinin	4.51E-02

Rank	GO Term	Adjusted P value
1	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
2	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.51E-06
3	GO:0043295: glutathione binding	5.12E-06
4	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.41E-05
5	GO:0005507: copper ion binding	1.45E-05
6	GO:0001054: RNA polymerase I activity	2.07E-05
7	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.64E-05
8	GO:0004815: aspartate-tRNA ligase activity	2.64E-05
9	GO:0008802: betaine-aldehyde dehydrogenase activity	2.64E-05
10	GO:0019172: glyoxalase III activity	6.72E-05
11	GO:0004776: succinate-CoA ligase (GDP-forming) activity	6.72E-05
12	GO:0004817: cysteine-tRNA ligase activity	6.72E-05
13	GO:0004775: succinate-CoA ligase (ADP-forming) activity	6.72E-05
14	GO:0080054: low-affinity nitrate transmembrane transporter activity	1.18E-04
15	GO:0004148: dihydrolipoyl dehydrogenase activity	1.18E-04
16	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	3.07E-04
17	GO:0004364: glutathione transferase activity	4.21E-04
18	GO:0004602: glutathione peroxidase activity	4.53E-04
19	GO:0008320: protein transmembrane transporter activity	5.30E-04
20	GO:0004143: diacylglycerol kinase activity	5.30E-04
21	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	5.85E-04
22	GO:0005524: ATP binding	6.47E-04
23	GO:0008026: ATP-dependent helicase activity	8.67E-04
24	GO:0030955: potassium ion binding	8.68E-04
25	GO:0004743: pyruvate kinase activity	8.68E-04
26	GO:0004713: protein tyrosine kinase activity	9.59E-04
27	GO:0004175: endopeptidase activity	1.35E-03
28	GO:0003756: protein disulfide isomerase activity	2.26E-03
29	GO:0016853: isomerase activity	2.78E-03
30	GO:0004222: metalloendopeptidase activity	5.02E-03
31	GO:0050897: cobalt ion binding	5.18E-03
32	GO:0004712: protein serine/threonine/tyrosine kinase activity	5.86E-03
33	GO:0015293: symporter activity	7.12E-03
34	GO:0004386: helicase activity	1.10E-02
35	GO:0008168: methyltransferase activity	2.02E-02
36	GO:0000287: magnesium ion binding	2.05E-02
37	GO:0050660: flavin adenine dinucleotide binding	2.30E-02

Rank	GO Term	Adjusted P value
1	GO:0005829: cytosol	9.66E-06
2	GO:0005736: DNA-directed RNA polymerase I complex	1.14E-05
3	GO:0005901: caveola	6.72E-05
4	GO:0030134: ER to Golgi transport vesicle	6.72E-05
5	GO:0008250: oligosaccharyltransferase complex	3.07E-04
6	GO:0005783: endoplasmic reticulum	3.15E-04
7	GO:0005774: vacuolar membrane	4.21E-04
8	GO:0016272: prefoldin complex	4.53E-04
9	GO:0005747: mitochondrial respiratory chain complex I	7.08E-04
10	GO:0005773: vacuole	8.97E-04
11	GO:0030176: integral component of endoplasmic reticulum membrane	1.45E-03
12	GO:0032580: Golgi cisterna membrane	3.47E-03
13	GO:0005789: endoplasmic reticulum membrane	3.70E-03
14	GO:0005788: endoplasmic reticulum lumen	4.06E-03
15	GO:0009506: plasmodesma	4.41E-03
16	GO:0005886: plasma membrane	7.48E-03
17	GO:0048046: apoplast	1.11E-02
18	GO:0005618: cell wall	1.24E-02
19	GO:0005759: mitochondrial matrix	1.42E-02
20	GO:0046658: anchored component of plasma membrane	1.86E-02