Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G27260

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043269: regulation of ion transport0.00E+00
2GO:0015690: aluminum cation transport0.00E+00
3GO:0046865: terpenoid transport0.00E+00
4GO:0033587: shikimate biosynthetic process0.00E+00
5GO:0051238: sequestering of metal ion0.00E+00
6GO:0006182: cGMP biosynthetic process0.00E+00
7GO:0072722: response to amitrole0.00E+00
8GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
9GO:0042742: defense response to bacterium2.75E-09
10GO:0009617: response to bacterium1.68E-08
11GO:0071456: cellular response to hypoxia1.77E-08
12GO:0006468: protein phosphorylation3.59E-07
13GO:0009682: induced systemic resistance2.33E-06
14GO:0051707: response to other organism5.10E-06
15GO:0000162: tryptophan biosynthetic process9.51E-06
16GO:0009627: systemic acquired resistance1.42E-05
17GO:0010150: leaf senescence1.65E-05
18GO:0050832: defense response to fungus1.67E-05
19GO:0010120: camalexin biosynthetic process2.69E-05
20GO:0010112: regulation of systemic acquired resistance3.67E-05
21GO:0055114: oxidation-reduction process1.13E-04
22GO:0002237: response to molecule of bacterial origin1.43E-04
23GO:0009697: salicylic acid biosynthetic process1.64E-04
24GO:0009817: defense response to fungus, incompatible interaction2.35E-04
25GO:0009407: toxin catabolic process2.77E-04
26GO:0009751: response to salicylic acid2.86E-04
27GO:0006952: defense response3.08E-04
28GO:0051245: negative regulation of cellular defense response4.26E-04
29GO:1990641: response to iron ion starvation4.26E-04
30GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.26E-04
31GO:0010726: positive regulation of hydrogen peroxide metabolic process4.26E-04
32GO:0009700: indole phytoalexin biosynthetic process4.26E-04
33GO:0010230: alternative respiration4.26E-04
34GO:0042759: long-chain fatty acid biosynthetic process4.26E-04
35GO:0034975: protein folding in endoplasmic reticulum4.26E-04
36GO:0030091: protein repair5.08E-04
37GO:0006979: response to oxidative stress5.75E-04
38GO:0009636: response to toxic substance6.24E-04
39GO:0048544: recognition of pollen6.32E-04
40GO:0006855: drug transmembrane transport6.60E-04
41GO:0009851: auxin biosynthetic process6.92E-04
42GO:0009630: gravitropism8.20E-04
43GO:0007166: cell surface receptor signaling pathway8.88E-04
44GO:0048569: post-embryonic animal organ development9.21E-04
45GO:0009866: induced systemic resistance, ethylene mediated signaling pathway9.21E-04
46GO:0006101: citrate metabolic process9.21E-04
47GO:0044419: interspecies interaction between organisms9.21E-04
48GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine9.21E-04
49GO:2000693: positive regulation of seed maturation9.21E-04
50GO:0060919: auxin influx9.21E-04
51GO:0019441: tryptophan catabolic process to kynurenine9.21E-04
52GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.21E-04
53GO:0048826: cotyledon morphogenesis9.21E-04
54GO:0010252: auxin homeostasis9.59E-04
55GO:0006032: chitin catabolic process1.02E-03
56GO:0009688: abscisic acid biosynthetic process1.02E-03
57GO:0043069: negative regulation of programmed cell death1.02E-03
58GO:0009626: plant-type hypersensitive response1.16E-03
59GO:0052544: defense response by callose deposition in cell wall1.17E-03
60GO:0009620: response to fungus1.22E-03
61GO:0002213: defense response to insect1.34E-03
62GO:0010338: leaf formation1.50E-03
63GO:0010272: response to silver ion1.50E-03
64GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway1.50E-03
65GO:0015692: lead ion transport1.50E-03
66GO:0048281: inflorescence morphogenesis1.50E-03
67GO:0080168: abscisic acid transport1.50E-03
68GO:0071367: cellular response to brassinosteroid stimulus1.50E-03
69GO:0080055: low-affinity nitrate transport1.50E-03
70GO:0008219: cell death1.67E-03
71GO:0070588: calcium ion transmembrane transport1.92E-03
72GO:0070301: cellular response to hydrogen peroxide2.17E-03
73GO:0010104: regulation of ethylene-activated signaling pathway2.17E-03
74GO:0006612: protein targeting to membrane2.17E-03
75GO:0046513: ceramide biosynthetic process2.17E-03
76GO:0010116: positive regulation of abscisic acid biosynthetic process2.17E-03
77GO:0019438: aromatic compound biosynthetic process2.17E-03
78GO:0048194: Golgi vesicle budding2.17E-03
79GO:0045087: innate immune response2.27E-03
80GO:0006874: cellular calcium ion homeostasis2.63E-03
81GO:0016998: cell wall macromolecule catabolic process2.89E-03
82GO:0006536: glutamate metabolic process2.91E-03
83GO:0010363: regulation of plant-type hypersensitive response2.91E-03
84GO:1901002: positive regulation of response to salt stress2.91E-03
85GO:0010107: potassium ion import2.91E-03
86GO:0010600: regulation of auxin biosynthetic process2.91E-03
87GO:0080142: regulation of salicylic acid biosynthetic process2.91E-03
88GO:1901141: regulation of lignin biosynthetic process2.91E-03
89GO:0000304: response to singlet oxygen3.73E-03
90GO:0034052: positive regulation of plant-type hypersensitive response3.73E-03
91GO:0006097: glyoxylate cycle3.73E-03
92GO:0070417: cellular response to cold4.06E-03
93GO:0010256: endomembrane system organization4.61E-03
94GO:0010358: leaf shaping4.61E-03
95GO:0010315: auxin efflux4.61E-03
96GO:0002238: response to molecule of fungal origin4.61E-03
97GO:0009759: indole glucosinolate biosynthetic process4.61E-03
98GO:0006561: proline biosynthetic process4.61E-03
99GO:0010942: positive regulation of cell death4.61E-03
100GO:0015691: cadmium ion transport4.61E-03
101GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response5.57E-03
102GO:0002229: defense response to oomycetes5.86E-03
103GO:0010193: response to ozone5.86E-03
104GO:0010583: response to cyclopentenone6.26E-03
105GO:1900056: negative regulation of leaf senescence6.58E-03
106GO:1902074: response to salt6.58E-03
107GO:0009061: anaerobic respiration7.65E-03
108GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline7.65E-03
109GO:0009819: drought recovery7.65E-03
110GO:2000070: regulation of response to water deprivation7.65E-03
111GO:0006102: isocitrate metabolic process7.65E-03
112GO:0051607: defense response to virus8.01E-03
113GO:0009699: phenylpropanoid biosynthetic process8.79E-03
114GO:0006075: (1->3)-beta-D-glucan biosynthetic process8.79E-03
115GO:0001558: regulation of cell growth8.79E-03
116GO:0010204: defense response signaling pathway, resistance gene-independent8.79E-03
117GO:0043562: cellular response to nitrogen levels8.79E-03
118GO:0009808: lignin metabolic process8.79E-03
119GO:0009816: defense response to bacterium, incompatible interaction8.98E-03
120GO:0009607: response to biotic stimulus8.98E-03
121GO:0007338: single fertilization9.98E-03
122GO:0006098: pentose-phosphate shunt9.98E-03
123GO:0034765: regulation of ion transmembrane transport9.98E-03
124GO:0090333: regulation of stomatal closure9.98E-03
125GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.12E-02
126GO:0008202: steroid metabolic process1.12E-02
127GO:0048767: root hair elongation1.17E-02
128GO:0010162: seed dormancy process1.25E-02
129GO:0009870: defense response signaling pathway, resistance gene-dependent1.25E-02
130GO:0046686: response to cadmium ion1.31E-02
131GO:0009089: lysine biosynthetic process via diaminopimelate1.39E-02
132GO:0000272: polysaccharide catabolic process1.39E-02
133GO:0030148: sphingolipid biosynthetic process1.39E-02
134GO:0032259: methylation1.48E-02
135GO:0006099: tricarboxylic acid cycle1.48E-02
136GO:0012501: programmed cell death1.53E-02
137GO:0015706: nitrate transport1.53E-02
138GO:0010229: inflorescence development1.67E-02
139GO:0055046: microgametogenesis1.67E-02
140GO:0009718: anthocyanin-containing compound biosynthetic process1.67E-02
141GO:0006631: fatty acid metabolic process1.68E-02
142GO:0042542: response to hydrogen peroxide1.75E-02
143GO:0055085: transmembrane transport1.80E-02
144GO:0010143: cutin biosynthetic process1.82E-02
145GO:0006541: glutamine metabolic process1.82E-02
146GO:0009926: auxin polar transport1.82E-02
147GO:0010540: basipetal auxin transport1.82E-02
148GO:0009225: nucleotide-sugar metabolic process1.98E-02
149GO:0042343: indole glucosinolate metabolic process1.98E-02
150GO:0010053: root epidermal cell differentiation1.98E-02
151GO:0010025: wax biosynthetic process2.14E-02
152GO:0009863: salicylic acid mediated signaling pathway2.30E-02
153GO:0080147: root hair cell development2.30E-02
154GO:2000377: regulation of reactive oxygen species metabolic process2.30E-02
155GO:0005992: trehalose biosynthetic process2.30E-02
156GO:0009809: lignin biosynthetic process2.46E-02
157GO:0006813: potassium ion transport2.46E-02
158GO:0051302: regulation of cell division2.47E-02
159GO:0009737: response to abscisic acid2.51E-02
160GO:0009734: auxin-activated signaling pathway2.63E-02
161GO:0048278: vesicle docking2.64E-02
162GO:0009814: defense response, incompatible interaction2.82E-02
163GO:0031348: negative regulation of defense response2.82E-02
164GO:0071215: cellular response to abscisic acid stimulus3.00E-02
165GO:0071369: cellular response to ethylene stimulus3.00E-02
166GO:0009625: response to insect3.00E-02
167GO:0010227: floral organ abscission3.00E-02
168GO:0006012: galactose metabolic process3.00E-02
169GO:0048367: shoot system development3.01E-02
170GO:0010584: pollen exine formation3.18E-02
171GO:0009561: megagametogenesis3.18E-02
172GO:0009306: protein secretion3.18E-02
173GO:0080167: response to karrikin3.29E-02
174GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.43E-02
175GO:0010200: response to chitin3.43E-02
176GO:0042391: regulation of membrane potential3.56E-02
177GO:0010051: xylem and phloem pattern formation3.56E-02
178GO:0044550: secondary metabolite biosynthetic process3.65E-02
179GO:0008360: regulation of cell shape3.75E-02
180GO:0006885: regulation of pH3.75E-02
181GO:0009646: response to absence of light3.95E-02
182GO:0061025: membrane fusion3.95E-02
183GO:0042752: regulation of circadian rhythm3.95E-02
184GO:0048825: cotyledon development4.15E-02
185GO:0000302: response to reactive oxygen species4.36E-02
186GO:0016032: viral process4.57E-02
187GO:0006869: lipid transport4.59E-02
188GO:0009733: response to auxin4.74E-02
189GO:0009567: double fertilization forming a zygote and endosperm4.99E-02
190GO:0019760: glucosinolate metabolic process4.99E-02
191GO:0006464: cellular protein modification process4.99E-02
RankGO TermAdjusted P value
1GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
2GO:0008843: endochitinase activity0.00E+00
3GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
4GO:0035885: exochitinase activity0.00E+00
5GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
6GO:0004674: protein serine/threonine kinase activity4.23E-08
7GO:0016301: kinase activity1.06E-06
8GO:0005524: ATP binding5.06E-06
9GO:0004049: anthranilate synthase activity2.78E-05
10GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.96E-05
11GO:0004364: glutathione transferase activity5.99E-05
12GO:0010279: indole-3-acetic acid amido synthetase activity1.06E-04
13GO:0005516: calmodulin binding2.48E-04
14GO:0033743: peptide-methionine (R)-S-oxide reductase activity3.15E-04
15GO:0102391: decanoate--CoA ligase activity3.15E-04
16GO:0004012: phospholipid-translocating ATPase activity3.15E-04
17GO:0009055: electron carrier activity3.50E-04
18GO:0004467: long-chain fatty acid-CoA ligase activity4.06E-04
19GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.26E-04
20GO:0004425: indole-3-glycerol-phosphate synthase activity4.26E-04
21GO:0033984: indole-3-glycerol-phosphate lyase activity4.26E-04
22GO:0031957: very long-chain fatty acid-CoA ligase activity4.26E-04
23GO:2001147: camalexin binding4.26E-04
24GO:0010285: L,L-diaminopimelate aminotransferase activity4.26E-04
25GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity4.26E-04
26GO:2001227: quercitrin binding4.26E-04
27GO:0050660: flavin adenine dinucleotide binding4.68E-04
28GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen9.03E-04
29GO:0003994: aconitate hydratase activity9.21E-04
30GO:0032934: sterol binding9.21E-04
31GO:0045140: inositol phosphoceramide synthase activity9.21E-04
32GO:0004061: arylformamidase activity9.21E-04
33GO:0050291: sphingosine N-acyltransferase activity9.21E-04
34GO:0004713: protein tyrosine kinase activity1.02E-03
35GO:0008171: O-methyltransferase activity1.02E-03
36GO:0008559: xenobiotic-transporting ATPase activity1.17E-03
37GO:0004324: ferredoxin-NADP+ reductase activity1.50E-03
38GO:0004383: guanylate cyclase activity1.50E-03
39GO:0080054: low-affinity nitrate transmembrane transporter activity1.50E-03
40GO:0005388: calcium-transporting ATPase activity1.52E-03
41GO:0010329: auxin efflux transmembrane transporter activity1.52E-03
42GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.52E-03
43GO:0004022: alcohol dehydrogenase (NAD) activity1.52E-03
44GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.57E-03
45GO:0005506: iron ion binding1.64E-03
46GO:0015238: drug transmembrane transporter activity1.78E-03
47GO:0008061: chitin binding1.92E-03
48GO:0004970: ionotropic glutamate receptor activity1.92E-03
49GO:0005217: intracellular ligand-gated ion channel activity1.92E-03
50GO:0030246: carbohydrate binding2.08E-03
51GO:0035529: NADH pyrophosphatase activity2.17E-03
52GO:0004351: glutamate decarboxylase activity2.17E-03
53GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.91E-03
54GO:0010328: auxin influx transmembrane transporter activity2.91E-03
55GO:0004031: aldehyde oxidase activity2.91E-03
56GO:0050302: indole-3-acetaldehyde oxidase activity2.91E-03
57GO:0050378: UDP-glucuronate 4-epimerase activity2.91E-03
58GO:0004834: tryptophan synthase activity2.91E-03
59GO:0047631: ADP-ribose diphosphatase activity3.73E-03
60GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity3.73E-03
61GO:0045431: flavonol synthase activity3.73E-03
62GO:0000210: NAD+ diphosphatase activity4.61E-03
63GO:0004029: aldehyde dehydrogenase (NAD) activity4.61E-03
64GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.67E-03
65GO:0004656: procollagen-proline 4-dioxygenase activity5.57E-03
66GO:0008113: peptide-methionine (S)-S-oxide reductase activity5.57E-03
67GO:0005242: inward rectifier potassium channel activity5.57E-03
68GO:0102425: myricetin 3-O-glucosyltransferase activity6.58E-03
69GO:0102360: daphnetin 3-O-glucosyltransferase activity6.58E-03
70GO:0008143: poly(A) binding6.58E-03
71GO:0043295: glutathione binding6.58E-03
72GO:0005085: guanyl-nucleotide exchange factor activity6.58E-03
73GO:0043565: sequence-specific DNA binding7.22E-03
74GO:0005507: copper ion binding7.32E-03
75GO:0019825: oxygen binding7.32E-03
76GO:0004034: aldose 1-epimerase activity7.65E-03
77GO:0047893: flavonol 3-O-glucosyltransferase activity7.65E-03
78GO:0004033: aldo-keto reductase (NADP) activity7.65E-03
79GO:0008142: oxysterol binding8.79E-03
80GO:0003843: 1,3-beta-D-glucan synthase activity8.79E-03
81GO:0071949: FAD binding9.98E-03
82GO:0030247: polysaccharide binding1.00E-02
83GO:0004743: pyruvate kinase activity1.12E-02
84GO:0030955: potassium ion binding1.12E-02
85GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.12E-02
86GO:0004568: chitinase activity1.25E-02
87GO:0015297: antiporter activity1.36E-02
88GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.41E-02
89GO:0004867: serine-type endopeptidase inhibitor activity1.98E-02
90GO:0031418: L-ascorbic acid binding2.30E-02
91GO:0000287: magnesium ion binding2.46E-02
92GO:0035251: UDP-glucosyltransferase activity2.64E-02
93GO:0045735: nutrient reservoir activity2.91E-02
94GO:0004672: protein kinase activity2.99E-02
95GO:0003756: protein disulfide isomerase activity3.18E-02
96GO:0004499: N,N-dimethylaniline monooxygenase activity3.18E-02
97GO:0004497: monooxygenase activity3.29E-02
98GO:0020037: heme binding3.42E-02
99GO:0005509: calcium ion binding3.44E-02
100GO:0030551: cyclic nucleotide binding3.56E-02
101GO:0005451: monovalent cation:proton antiporter activity3.56E-02
102GO:0015035: protein disulfide oxidoreductase activity3.61E-02
103GO:0016746: transferase activity, transferring acyl groups3.61E-02
104GO:0016853: isomerase activity3.95E-02
105GO:0015299: solute:proton antiporter activity3.95E-02
106GO:0050662: coenzyme binding3.95E-02
107GO:0005215: transporter activity4.62E-02
108GO:0015385: sodium:proton antiporter activity4.78E-02
109GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.78E-02
110GO:0030170: pyridoxal phosphate binding4.85E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane4.52E-10
2GO:0016021: integral component of membrane1.32E-09
3GO:0005783: endoplasmic reticulum3.85E-05
4GO:0045252: oxoglutarate dehydrogenase complex4.26E-04
5GO:0005901: caveola9.21E-04
6GO:0009925: basal plasma membrane9.21E-04
7GO:0005950: anthranilate synthase complex9.21E-04
8GO:0000325: plant-type vacuole2.02E-03
9GO:0045177: apical part of cell2.17E-03
10GO:0032588: trans-Golgi network membrane4.61E-03
11GO:0005829: cytosol6.52E-03
12GO:0000148: 1,3-beta-D-glucan synthase complex8.79E-03
13GO:0010494: cytoplasmic stress granule9.98E-03
14GO:0016020: membrane1.22E-02
15GO:0016602: CCAAT-binding factor complex1.67E-02
16GO:0043231: intracellular membrane-bounded organelle1.83E-02
17GO:0005618: cell wall1.87E-02
18GO:0005576: extracellular region1.99E-02
19GO:0046658: anchored component of plasma membrane2.07E-02
20GO:0005770: late endosome3.75E-02
21GO:0009504: cell plate4.15E-02
22GO:0032580: Golgi cisterna membrane4.99E-02
Gene type



Gene DE type