co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G26555

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033494: ferulate metabolic process	0.00E+00
2	GO:0045176: apical protein localization	0.00E+00
3	GO:0015805: S-adenosyl-L-methionine transport	0.00E+00
4	GO:0042493: response to drug	0.00E+00
5	GO:0046620: regulation of organ growth	1.50E-08
6	GO:0009926: auxin polar transport	3.04E-06
7	GO:0009725: response to hormone	1.65E-05
8	GO:0006833: water transport	2.96E-05
9	GO:0015979: photosynthesis	3.78E-05
10	GO:0009733: response to auxin	8.09E-05
11	GO:0034220: ion transmembrane transport	9.17E-05
12	GO:0006810: transport	1.76E-04
13	GO:0000481: maturation of 5S rRNA	1.77E-04
14	GO:0042371: vitamin K biosynthetic process	1.77E-04
15	GO:0006106: fumarate metabolic process	1.77E-04
16	GO:0034337: RNA folding	1.77E-04
17	GO:0071588: hydrogen peroxide mediated signaling pathway	1.77E-04
18	GO:0009773: photosynthetic electron transport in photosystem I	3.42E-04
19	GO:0010115: regulation of abscisic acid biosynthetic process	4.01E-04
20	GO:0001736: establishment of planar polarity	4.01E-04
21	GO:0010024: phytochromobilin biosynthetic process	4.01E-04
22	GO:0006006: glucose metabolic process	4.47E-04
23	GO:0010143: cutin biosynthetic process	5.04E-04
24	GO:0006788: heme oxidation	6.55E-04
25	GO:0015840: urea transport	6.55E-04
26	GO:0006518: peptide metabolic process	6.55E-04
27	GO:0009734: auxin-activated signaling pathway	8.40E-04
28	GO:0080170: hydrogen peroxide transmembrane transport	9.34E-04
29	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	9.34E-04
30	GO:0009800: cinnamic acid biosynthetic process	9.34E-04
31	GO:0009650: UV protection	9.34E-04
32	GO:1901332: negative regulation of lateral root development	9.34E-04
33	GO:0051639: actin filament network formation	9.34E-04
34	GO:0030104: water homeostasis	1.24E-03
35	GO:0010109: regulation of photosynthesis	1.24E-03
36	GO:0051764: actin crosslink formation	1.24E-03
37	GO:0042335: cuticle development	1.25E-03
38	GO:0000413: protein peptidyl-prolyl isomerization	1.25E-03
39	GO:0009416: response to light stimulus	1.25E-03
40	GO:0031365: N-terminal protein amino acid modification	1.57E-03
41	GO:0006461: protein complex assembly	1.57E-03
42	GO:0006559: L-phenylalanine catabolic process	1.94E-03
43	GO:0009913: epidermal cell differentiation	1.94E-03
44	GO:0006596: polyamine biosynthetic process	1.94E-03
45	GO:0006561: proline biosynthetic process	1.94E-03
46	GO:0048759: xylem vessel member cell differentiation	1.94E-03
47	GO:0006751: glutathione catabolic process	1.94E-03
48	GO:0048827: phyllome development	1.94E-03
49	GO:0042549: photosystem II stabilization	1.94E-03
50	GO:0016042: lipid catabolic process	2.15E-03
51	GO:0042372: phylloquinone biosynthetic process	2.32E-03
52	GO:0010019: chloroplast-nucleus signaling pathway	2.32E-03
53	GO:0080086: stamen filament development	2.32E-03
54	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.32E-03
55	GO:0042128: nitrate assimilation	2.65E-03
56	GO:1900056: negative regulation of leaf senescence	2.74E-03
57	GO:1900057: positive regulation of leaf senescence	2.74E-03
58	GO:0008610: lipid biosynthetic process	3.17E-03
59	GO:0030091: protein repair	3.17E-03
60	GO:0032508: DNA duplex unwinding	3.17E-03
61	GO:0010311: lateral root formation	3.25E-03
62	GO:0009631: cold acclimation	3.57E-03
63	GO:0009657: plastid organization	3.63E-03
64	GO:0032544: plastid translation	3.63E-03
65	GO:0009051: pentose-phosphate shunt, oxidative branch	4.10E-03
66	GO:0006098: pentose-phosphate shunt	4.10E-03
67	GO:0010206: photosystem II repair	4.10E-03
68	GO:0009414: response to water deprivation	4.15E-03
69	GO:0010205: photoinhibition	4.60E-03
70	GO:0009638: phototropism	4.60E-03
71	GO:0009658: chloroplast organization	4.93E-03
72	GO:0042254: ribosome biogenesis	5.05E-03
73	GO:0009299: mRNA transcription	5.11E-03
74	GO:0009688: abscisic acid biosynthetic process	5.11E-03
75	GO:0048829: root cap development	5.11E-03
76	GO:0019684: photosynthesis, light reaction	5.65E-03
77	GO:0009089: lysine biosynthetic process via diaminopimelate	5.65E-03
78	GO:0009750: response to fructose	5.65E-03
79	GO:0048765: root hair cell differentiation	5.65E-03
80	GO:0000038: very long-chain fatty acid metabolic process	5.65E-03
81	GO:0016024: CDP-diacylglycerol biosynthetic process	6.20E-03
82	GO:0010628: positive regulation of gene expression	6.78E-03
83	GO:0006108: malate metabolic process	6.78E-03
84	GO:0010229: inflorescence development	6.78E-03
85	GO:0006094: gluconeogenesis	6.78E-03
86	GO:0009409: response to cold	7.34E-03
87	GO:0010207: photosystem II assembly	7.37E-03
88	GO:0019253: reductive pentose-phosphate cycle	7.37E-03
89	GO:0010540: basipetal auxin transport	7.37E-03
90	GO:0055085: transmembrane transport	7.71E-03
91	GO:0006096: glycolytic process	8.02E-03
92	GO:0006636: unsaturated fatty acid biosynthetic process	8.61E-03
93	GO:0019762: glucosinolate catabolic process	8.61E-03
94	GO:0000027: ribosomal large subunit assembly	9.26E-03
95	GO:0051017: actin filament bundle assembly	9.26E-03
96	GO:0005992: trehalose biosynthetic process	9.26E-03
97	GO:0009624: response to nematode	9.66E-03
98	GO:0007017: microtubule-based process	9.92E-03
99	GO:0006825: copper ion transport	9.92E-03
100	GO:0031408: oxylipin biosynthetic process	1.06E-02
101	GO:0003333: amino acid transmembrane transport	1.06E-02
102	GO:0048511: rhythmic process	1.06E-02
103	GO:0009411: response to UV	1.20E-02
104	GO:0009651: response to salt stress	1.24E-02
105	GO:0006284: base-excision repair	1.27E-02
106	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.35E-02
107	GO:0010087: phloem or xylem histogenesis	1.43E-02
108	GO:0009958: positive gravitropism	1.50E-02
109	GO:0010182: sugar mediated signaling pathway	1.50E-02
110	GO:0071555: cell wall organization	1.56E-02
111	GO:0042752: regulation of circadian rhythm	1.58E-02
112	GO:0040008: regulation of growth	1.60E-02
113	GO:0009737: response to abscisic acid	1.61E-02
114	GO:0048825: cotyledon development	1.66E-02
115	GO:0071554: cell wall organization or biogenesis	1.75E-02
116	GO:0000302: response to reactive oxygen species	1.75E-02
117	GO:0009630: gravitropism	1.83E-02
118	GO:0030163: protein catabolic process	1.91E-02
119	GO:0071281: cellular response to iron ion	1.91E-02
120	GO:0009738: abscisic acid-activated signaling pathway	2.11E-02
121	GO:0009611: response to wounding	2.26E-02
122	GO:0009911: positive regulation of flower development	2.27E-02
123	GO:0001666: response to hypoxia	2.27E-02
124	GO:0010027: thylakoid membrane organization	2.27E-02
125	GO:0009826: unidimensional cell growth	2.50E-02
126	GO:0010411: xyloglucan metabolic process	2.55E-02
127	GO:0016311: dephosphorylation	2.64E-02
128	GO:0018298: protein-chromophore linkage	2.74E-02
129	GO:0007049: cell cycle	2.90E-02
130	GO:0009407: toxin catabolic process	2.94E-02
131	GO:0009723: response to ethylene	3.00E-02
132	GO:0006865: amino acid transport	3.14E-02
133	GO:0034599: cellular response to oxidative stress	3.35E-02
134	GO:0006099: tricarboxylic acid cycle	3.35E-02
135	GO:0006839: mitochondrial transport	3.56E-02
136	GO:0030001: metal ion transport	3.56E-02
137	GO:0009744: response to sucrose	3.88E-02
138	GO:0042546: cell wall biogenesis	4.00E-02
139	GO:0009644: response to high light intensity	4.11E-02
140	GO:0006869: lipid transport	4.21E-02
141	GO:0009636: response to toxic substance	4.22E-02
142	GO:0006855: drug transmembrane transport	4.33E-02
143	GO:0042538: hyperosmotic salinity response	4.56E-02
144	GO:0007165: signal transduction	4.58E-02
145	GO:0006281: DNA repair	4.73E-02
146	GO:0009585: red, far-red light phototransduction	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
2	GO:0010487: thermospermine synthase activity	0.00E+00
3	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
4	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
5	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
6	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.54E-06
7	GO:0015250: water channel activity	1.30E-05
8	GO:0005528: FK506 binding	3.50E-05
9	GO:0015200: methylammonium transmembrane transporter activity	1.77E-04
10	GO:0016768: spermine synthase activity	1.77E-04
11	GO:0004333: fumarate hydratase activity	1.77E-04
12	GO:0004871: signal transducer activity	3.40E-04
13	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	4.01E-04
14	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	4.01E-04
15	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	4.01E-04
16	GO:0003839: gamma-glutamylcyclotransferase activity	4.01E-04
17	GO:0043425: bHLH transcription factor binding	4.01E-04
18	GO:0003993: acid phosphatase activity	4.86E-04
19	GO:0050734: hydroxycinnamoyltransferase activity	6.55E-04
20	GO:0045548: phenylalanine ammonia-lyase activity	6.55E-04
21	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	6.55E-04
22	GO:0016788: hydrolase activity, acting on ester bonds	9.27E-04
23	GO:0001872: (1->3)-beta-D-glucan binding	9.34E-04
24	GO:0010328: auxin influx transmembrane transporter activity	1.24E-03
25	GO:0004392: heme oxygenase (decyclizing) activity	1.24E-03
26	GO:0015204: urea transmembrane transporter activity	1.24E-03
27	GO:0010011: auxin binding	1.24E-03
28	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.24E-03
29	GO:0052689: carboxylic ester hydrolase activity	1.45E-03
30	GO:0004872: receptor activity	1.55E-03
31	GO:0008725: DNA-3-methyladenine glycosylase activity	1.57E-03
32	GO:0019843: rRNA binding	1.89E-03
33	GO:0004332: fructose-bisphosphate aldolase activity	1.94E-03
34	GO:0004629: phospholipase C activity	1.94E-03
35	GO:0004130: cytochrome-c peroxidase activity	1.94E-03
36	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.94E-03
37	GO:0016208: AMP binding	1.94E-03
38	GO:0016688: L-ascorbate peroxidase activity	1.94E-03
39	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.94E-03
40	GO:0008519: ammonium transmembrane transporter activity	1.94E-03
41	GO:0016791: phosphatase activity	2.00E-03
42	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.32E-03
43	GO:0051753: mannan synthase activity	2.32E-03
44	GO:0004435: phosphatidylinositol phospholipase C activity	2.32E-03
45	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.32E-03
46	GO:0008235: metalloexopeptidase activity	2.74E-03
47	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	3.63E-03
48	GO:0050661: NADP binding	4.45E-03
49	GO:0004864: protein phosphatase inhibitor activity	5.11E-03
50	GO:0004805: trehalose-phosphatase activity	5.11E-03
51	GO:0005215: transporter activity	5.15E-03
52	GO:0015386: potassium:proton antiporter activity	5.65E-03
53	GO:0004177: aminopeptidase activity	5.65E-03
54	GO:0015293: symporter activity	5.66E-03
55	GO:0008081: phosphoric diester hydrolase activity	6.78E-03
56	GO:0004022: alcohol dehydrogenase (NAD) activity	6.78E-03
57	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	8.18E-03
58	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	8.61E-03
59	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	8.61E-03
60	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	8.61E-03
61	GO:0004722: protein serine/threonine phosphatase activity	9.17E-03
62	GO:0015079: potassium ion transmembrane transporter activity	9.92E-03
63	GO:0016746: transferase activity, transferring acyl groups	9.95E-03
64	GO:0030570: pectate lyase activity	1.20E-02
65	GO:0022891: substrate-specific transmembrane transporter activity	1.20E-02
66	GO:0016829: lyase activity	1.31E-02
67	GO:0005509: calcium ion binding	1.38E-02
68	GO:0003735: structural constituent of ribosome	1.43E-02
69	GO:0008289: lipid binding	1.62E-02
70	GO:0019901: protein kinase binding	1.66E-02
71	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.75E-02
72	GO:0051015: actin filament binding	1.91E-02
73	GO:0005200: structural constituent of cytoskeleton	2.09E-02
74	GO:0016413: O-acetyltransferase activity	2.18E-02
75	GO:0016491: oxidoreductase activity	2.35E-02
76	GO:0016168: chlorophyll binding	2.36E-02
77	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.45E-02
78	GO:0102483: scopolin beta-glucosidase activity	2.55E-02
79	GO:0030247: polysaccharide binding	2.55E-02
80	GO:0004683: calmodulin-dependent protein kinase activity	2.55E-02
81	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.55E-02
82	GO:0008236: serine-type peptidase activity	2.64E-02
83	GO:0015238: drug transmembrane transporter activity	2.84E-02
84	GO:0004222: metalloendopeptidase activity	2.94E-02
85	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.94E-02
86	GO:0030145: manganese ion binding	3.04E-02
87	GO:0008422: beta-glucosidase activity	3.45E-02
88	GO:0004364: glutathione transferase activity	3.78E-02
89	GO:0051537: 2 iron, 2 sulfur cluster binding	4.11E-02
90	GO:0046872: metal ion binding	4.29E-02
91	GO:0051287: NAD binding	4.45E-02

Rank	GO Term	Adjusted P value
1	GO:0044391: ribosomal subunit	0.00E+00
2	GO:0009543: chloroplast thylakoid lumen	2.35E-12
3	GO:0031977: thylakoid lumen	4.57E-11
4	GO:0009507: chloroplast	3.21E-10
5	GO:0009579: thylakoid	4.18E-10
6	GO:0009535: chloroplast thylakoid membrane	6.25E-07
7	GO:0009534: chloroplast thylakoid	1.05E-06
8	GO:0009570: chloroplast stroma	4.59E-06
9	GO:0009941: chloroplast envelope	2.30E-05
10	GO:0009654: photosystem II oxygen evolving complex	4.11E-05
11	GO:0009533: chloroplast stromal thylakoid	1.07E-04
12	GO:0042807: central vacuole	1.07E-04
13	GO:0019898: extrinsic component of membrane	1.27E-04
14	GO:0043674: columella	1.77E-04
15	GO:0045239: tricarboxylic acid cycle enzyme complex	1.77E-04
16	GO:0008180: COP9 signalosome	2.09E-04
17	GO:0005886: plasma membrane	2.93E-04
18	GO:0031225: anchored component of membrane	6.90E-04
19	GO:0032432: actin filament bundle	9.34E-04
20	GO:0015630: microtubule cytoskeleton	9.34E-04
21	GO:0031969: chloroplast membrane	1.24E-03
22	GO:0009523: photosystem II	1.55E-03
23	GO:0009986: cell surface	2.74E-03
24	GO:0019005: SCF ubiquitin ligase complex	3.09E-03
25	GO:0005887: integral component of plasma membrane	3.58E-03
26	GO:0000326: protein storage vacuole	3.63E-03
27	GO:0046658: anchored component of plasma membrane	4.05E-03
28	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.10E-03
29	GO:0005840: ribosome	4.69E-03
30	GO:0005884: actin filament	5.65E-03
31	GO:0005618: cell wall	6.06E-03
32	GO:0032040: small-subunit processome	6.20E-03
33	GO:0031012: extracellular matrix	6.78E-03
34	GO:0000502: proteasome complex	6.78E-03
35	GO:0030095: chloroplast photosystem II	7.37E-03
36	GO:0016020: membrane	8.96E-03
37	GO:0048046: apoplast	1.45E-02
38	GO:0005770: late endosome	1.50E-02
39	GO:0009705: plant-type vacuole membrane	1.68E-02
40	GO:0005778: peroxisomal membrane	2.09E-02
41	GO:0005777: peroxisome	2.62E-02
42	GO:0015934: large ribosomal subunit	3.04E-02
43	GO:0005874: microtubule	3.11E-02
44	GO:0005819: spindle	3.45E-02