GO Enrichment Analysis of Co-expressed Genes with
AT4G26520
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 2 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 3 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 4 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 5 | GO:0000481: maturation of 5S rRNA | 8.43E-05 |
| 6 | GO:0034337: RNA folding | 8.43E-05 |
| 7 | GO:0006427: histidyl-tRNA aminoacylation | 8.43E-05 |
| 8 | GO:0010270: photosystem II oxygen evolving complex assembly | 2.00E-04 |
| 9 | GO:0034755: iron ion transmembrane transport | 2.00E-04 |
| 10 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.83E-04 |
| 11 | GO:0015979: photosynthesis | 3.19E-04 |
| 12 | GO:0006760: folic acid-containing compound metabolic process | 3.35E-04 |
| 13 | GO:0010581: regulation of starch biosynthetic process | 3.35E-04 |
| 14 | GO:0009800: cinnamic acid biosynthetic process | 4.84E-04 |
| 15 | GO:0009152: purine ribonucleotide biosynthetic process | 4.84E-04 |
| 16 | GO:0046653: tetrahydrofolate metabolic process | 4.84E-04 |
| 17 | GO:2000122: negative regulation of stomatal complex development | 6.44E-04 |
| 18 | GO:0046656: folic acid biosynthetic process | 6.44E-04 |
| 19 | GO:0010037: response to carbon dioxide | 6.44E-04 |
| 20 | GO:0015976: carbon utilization | 6.44E-04 |
| 21 | GO:0080110: sporopollenin biosynthetic process | 8.14E-04 |
| 22 | GO:0031365: N-terminal protein amino acid modification | 8.14E-04 |
| 23 | GO:0010027: thylakoid membrane organization | 8.91E-04 |
| 24 | GO:0010190: cytochrome b6f complex assembly | 9.94E-04 |
| 25 | GO:0006596: polyamine biosynthetic process | 9.94E-04 |
| 26 | GO:0048759: xylem vessel member cell differentiation | 9.94E-04 |
| 27 | GO:0042549: photosystem II stabilization | 9.94E-04 |
| 28 | GO:0016554: cytidine to uridine editing | 9.94E-04 |
| 29 | GO:0006828: manganese ion transport | 9.94E-04 |
| 30 | GO:0006559: L-phenylalanine catabolic process | 9.94E-04 |
| 31 | GO:0018298: protein-chromophore linkage | 1.15E-03 |
| 32 | GO:0042372: phylloquinone biosynthetic process | 1.18E-03 |
| 33 | GO:0046654: tetrahydrofolate biosynthetic process | 1.18E-03 |
| 34 | GO:0009645: response to low light intensity stimulus | 1.39E-03 |
| 35 | GO:0010196: nonphotochemical quenching | 1.39E-03 |
| 36 | GO:0032508: DNA duplex unwinding | 1.60E-03 |
| 37 | GO:0048564: photosystem I assembly | 1.60E-03 |
| 38 | GO:0019430: removal of superoxide radicals | 1.83E-03 |
| 39 | GO:0071482: cellular response to light stimulus | 1.83E-03 |
| 40 | GO:0000373: Group II intron splicing | 2.06E-03 |
| 41 | GO:0009051: pentose-phosphate shunt, oxidative branch | 2.06E-03 |
| 42 | GO:0006855: drug transmembrane transport | 2.14E-03 |
| 43 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.30E-03 |
| 44 | GO:1900865: chloroplast RNA modification | 2.30E-03 |
| 45 | GO:0010380: regulation of chlorophyll biosynthetic process | 2.30E-03 |
| 46 | GO:0006535: cysteine biosynthetic process from serine | 2.56E-03 |
| 47 | GO:0048829: root cap development | 2.56E-03 |
| 48 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.56E-03 |
| 49 | GO:0019684: photosynthesis, light reaction | 2.82E-03 |
| 50 | GO:0009089: lysine biosynthetic process via diaminopimelate | 2.82E-03 |
| 51 | GO:0009073: aromatic amino acid family biosynthetic process | 2.82E-03 |
| 52 | GO:0043085: positive regulation of catalytic activity | 2.82E-03 |
| 53 | GO:0006879: cellular iron ion homeostasis | 2.82E-03 |
| 54 | GO:0006816: calcium ion transport | 2.82E-03 |
| 55 | GO:0009773: photosynthetic electron transport in photosystem I | 2.82E-03 |
| 56 | GO:0006397: mRNA processing | 3.06E-03 |
| 57 | GO:0010628: positive regulation of gene expression | 3.37E-03 |
| 58 | GO:0006006: glucose metabolic process | 3.37E-03 |
| 59 | GO:0010207: photosystem II assembly | 3.66E-03 |
| 60 | GO:0006833: water transport | 4.26E-03 |
| 61 | GO:0019344: cysteine biosynthetic process | 4.57E-03 |
| 62 | GO:0016575: histone deacetylation | 4.89E-03 |
| 63 | GO:0003333: amino acid transmembrane transport | 5.22E-03 |
| 64 | GO:0061077: chaperone-mediated protein folding | 5.22E-03 |
| 65 | GO:0010584: pollen exine formation | 6.24E-03 |
| 66 | GO:0006284: base-excision repair | 6.24E-03 |
| 67 | GO:0034220: ion transmembrane transport | 6.97E-03 |
| 68 | GO:0010087: phloem or xylem histogenesis | 6.97E-03 |
| 69 | GO:0042335: cuticle development | 6.97E-03 |
| 70 | GO:0008380: RNA splicing | 7.18E-03 |
| 71 | GO:0042128: nitrate assimilation | 1.19E-02 |
| 72 | GO:0015995: chlorophyll biosynthetic process | 1.23E-02 |
| 73 | GO:0045454: cell redox homeostasis | 1.38E-02 |
| 74 | GO:0010218: response to far red light | 1.42E-02 |
| 75 | GO:0010119: regulation of stomatal movement | 1.47E-02 |
| 76 | GO:0006865: amino acid transport | 1.52E-02 |
| 77 | GO:0009637: response to blue light | 1.57E-02 |
| 78 | GO:0009853: photorespiration | 1.57E-02 |
| 79 | GO:0010114: response to red light | 1.88E-02 |
| 80 | GO:0009926: auxin polar transport | 1.88E-02 |
| 81 | GO:0008152: metabolic process | 1.89E-02 |
| 82 | GO:0009644: response to high light intensity | 1.99E-02 |
| 83 | GO:0042538: hyperosmotic salinity response | 2.21E-02 |
| 84 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.38E-02 |
| 85 | GO:0009058: biosynthetic process | 3.64E-02 |
| 86 | GO:0009737: response to abscisic acid | 3.79E-02 |
| 87 | GO:0042744: hydrogen peroxide catabolic process | 3.84E-02 |
| 88 | GO:0006413: translational initiation | 4.19E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 2 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 3 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 4 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 5 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 6 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 7 | GO:0010487: thermospermine synthase activity | 0.00E+00 |
| 8 | GO:0005528: FK506 binding | 6.09E-10 |
| 9 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.10E-07 |
| 10 | GO:0004045: aminoacyl-tRNA hydrolase activity | 6.70E-06 |
| 11 | GO:0004821: histidine-tRNA ligase activity | 8.43E-05 |
| 12 | GO:0016768: spermine synthase activity | 8.43E-05 |
| 13 | GO:0004150: dihydroneopterin aldolase activity | 2.00E-04 |
| 14 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.00E-04 |
| 15 | GO:0050017: L-3-cyanoalanine synthase activity | 2.00E-04 |
| 16 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 2.00E-04 |
| 17 | GO:0031409: pigment binding | 2.29E-04 |
| 18 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 3.35E-04 |
| 19 | GO:0008864: formyltetrahydrofolate deformylase activity | 3.35E-04 |
| 20 | GO:0045548: phenylalanine ammonia-lyase activity | 3.35E-04 |
| 21 | GO:0048487: beta-tubulin binding | 4.84E-04 |
| 22 | GO:0001872: (1->3)-beta-D-glucan binding | 4.84E-04 |
| 23 | GO:0004659: prenyltransferase activity | 6.44E-04 |
| 24 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 6.44E-04 |
| 25 | GO:0010328: auxin influx transmembrane transporter activity | 6.44E-04 |
| 26 | GO:0008725: DNA-3-methyladenine glycosylase activity | 8.14E-04 |
| 27 | GO:0005215: transporter activity | 8.50E-04 |
| 28 | GO:0016168: chlorophyll binding | 9.39E-04 |
| 29 | GO:0016208: AMP binding | 9.94E-04 |
| 30 | GO:0004124: cysteine synthase activity | 1.18E-03 |
| 31 | GO:0015238: drug transmembrane transporter activity | 1.20E-03 |
| 32 | GO:0008235: metalloexopeptidase activity | 1.39E-03 |
| 33 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.83E-03 |
| 34 | GO:0005381: iron ion transmembrane transporter activity | 2.30E-03 |
| 35 | GO:0005384: manganese ion transmembrane transporter activity | 2.30E-03 |
| 36 | GO:0008047: enzyme activator activity | 2.56E-03 |
| 37 | GO:0016787: hydrolase activity | 2.69E-03 |
| 38 | GO:0004177: aminopeptidase activity | 2.82E-03 |
| 39 | GO:0015386: potassium:proton antiporter activity | 2.82E-03 |
| 40 | GO:0004089: carbonate dehydratase activity | 3.37E-03 |
| 41 | GO:0015095: magnesium ion transmembrane transporter activity | 3.37E-03 |
| 42 | GO:0031072: heat shock protein binding | 3.37E-03 |
| 43 | GO:0004407: histone deacetylase activity | 4.57E-03 |
| 44 | GO:0015079: potassium ion transmembrane transporter activity | 4.89E-03 |
| 45 | GO:0015297: antiporter activity | 5.74E-03 |
| 46 | GO:0001085: RNA polymerase II transcription factor binding | 7.34E-03 |
| 47 | GO:0050662: coenzyme binding | 7.72E-03 |
| 48 | GO:0004791: thioredoxin-disulfide reductase activity | 7.72E-03 |
| 49 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 9.30E-03 |
| 50 | GO:0015250: water channel activity | 1.10E-02 |
| 51 | GO:0004721: phosphoprotein phosphatase activity | 1.23E-02 |
| 52 | GO:0030247: polysaccharide binding | 1.23E-02 |
| 53 | GO:0005509: calcium ion binding | 1.33E-02 |
| 54 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.47E-02 |
| 55 | GO:0003824: catalytic activity | 1.66E-02 |
| 56 | GO:0050661: NADP binding | 1.72E-02 |
| 57 | GO:0004185: serine-type carboxypeptidase activity | 1.88E-02 |
| 58 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.99E-02 |
| 59 | GO:0043621: protein self-association | 1.99E-02 |
| 60 | GO:0015293: symporter activity | 2.04E-02 |
| 61 | GO:0015171: amino acid transmembrane transporter activity | 2.50E-02 |
| 62 | GO:0051082: unfolded protein binding | 2.98E-02 |
| 63 | GO:0046872: metal ion binding | 3.12E-02 |
| 64 | GO:0019843: rRNA binding | 3.50E-02 |
| 65 | GO:0030170: pyridoxal phosphate binding | 3.77E-02 |
| 66 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.84E-02 |
| 67 | GO:0003743: translation initiation factor activity | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 6.11E-28 |
| 2 | GO:0009543: chloroplast thylakoid lumen | 1.19E-14 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 2.46E-14 |
| 4 | GO:0009570: chloroplast stroma | 7.63E-10 |
| 5 | GO:0031977: thylakoid lumen | 3.05E-09 |
| 6 | GO:0009941: chloroplast envelope | 1.13E-07 |
| 7 | GO:0009579: thylakoid | 2.05E-07 |
| 8 | GO:0009654: photosystem II oxygen evolving complex | 7.79E-06 |
| 9 | GO:0019898: extrinsic component of membrane | 2.70E-05 |
| 10 | GO:0030529: intracellular ribonucleoprotein complex | 5.40E-05 |
| 11 | GO:0009782: photosystem I antenna complex | 8.43E-05 |
| 12 | GO:0030076: light-harvesting complex | 2.04E-04 |
| 13 | GO:0031969: chloroplast membrane | 2.57E-04 |
| 14 | GO:0009534: chloroplast thylakoid | 1.50E-03 |
| 15 | GO:0032040: small-subunit processome | 3.09E-03 |
| 16 | GO:0000312: plastid small ribosomal subunit | 3.66E-03 |
| 17 | GO:0030095: chloroplast photosystem II | 3.66E-03 |
| 18 | GO:0010287: plastoglobule | 4.14E-03 |
| 19 | GO:0042651: thylakoid membrane | 4.89E-03 |
| 20 | GO:0009522: photosystem I | 7.72E-03 |
| 21 | GO:0046658: anchored component of plasma membrane | 7.96E-03 |
| 22 | GO:0009523: photosystem II | 8.10E-03 |
| 23 | GO:0005778: peroxisomal membrane | 1.01E-02 |
| 24 | GO:0005667: transcription factor complex | 1.19E-02 |
| 25 | GO:0016020: membrane | 1.52E-02 |
| 26 | GO:0031225: anchored component of membrane | 4.71E-02 |