co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G26510

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071260: cellular response to mechanical stimulus	0.00E+00
2	GO:0010378: temperature compensation of the circadian clock	0.00E+00
3	GO:0090279: regulation of calcium ion import	0.00E+00
4	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
5	GO:0071474: cellular hyperosmotic response	0.00E+00
6	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
7	GO:0070584: mitochondrion morphogenesis	0.00E+00
8	GO:0071311: cellular response to acetate	0.00E+00
9	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
10	GO:0009768: photosynthesis, light harvesting in photosystem I	1.38E-21
11	GO:0018298: protein-chromophore linkage	1.67E-15
12	GO:0015979: photosynthesis	4.71E-14
13	GO:0009645: response to low light intensity stimulus	3.33E-11
14	GO:0010114: response to red light	6.97E-11
15	GO:0010218: response to far red light	6.74E-10
16	GO:0009637: response to blue light	1.15E-09
17	GO:0009644: response to high light intensity	1.40E-07
18	GO:0009769: photosynthesis, light harvesting in photosystem II	1.44E-06
19	GO:0007623: circadian rhythm	4.46E-06
20	GO:0009416: response to light stimulus	5.61E-06
21	GO:0009765: photosynthesis, light harvesting	2.45E-05
22	GO:0071470: cellular response to osmotic stress	8.20E-05
23	GO:0010196: nonphotochemical quenching	1.09E-04
24	GO:0009409: response to cold	1.47E-04
25	GO:0010496: intercellular transport	1.80E-04
26	GO:0010362: negative regulation of anion channel activity by blue light	1.80E-04
27	GO:0015812: gamma-aminobutyric acid transport	1.80E-04
28	GO:0032958: inositol phosphate biosynthetic process	1.80E-04
29	GO:0034472: snRNA 3'-end processing	1.80E-04
30	GO:0080167: response to karrikin	2.28E-04
31	GO:0015995: chlorophyll biosynthetic process	3.01E-04
32	GO:0000160: phosphorelay signal transduction system	3.67E-04
33	GO:0051262: protein tetramerization	4.05E-04
34	GO:0090057: root radial pattern formation	4.05E-04
35	GO:0051170: nuclear import	4.05E-04
36	GO:0010155: regulation of proton transport	4.05E-04
37	GO:0010119: regulation of stomatal movement	4.17E-04
38	GO:1902448: positive regulation of shade avoidance	6.61E-04
39	GO:0006598: polyamine catabolic process	6.61E-04
40	GO:0071230: cellular response to amino acid stimulus	6.61E-04
41	GO:0090153: regulation of sphingolipid biosynthetic process	6.61E-04
42	GO:0072661: protein targeting to plasma membrane	6.61E-04
43	GO:0006874: cellular calcium ion homeostasis	7.77E-04
44	GO:0009269: response to desiccation	8.51E-04
45	GO:0048511: rhythmic process	8.51E-04
46	GO:0010017: red or far-red light signaling pathway	9.27E-04
47	GO:1901000: regulation of response to salt stress	9.45E-04
48	GO:0030100: regulation of endocytosis	9.45E-04
49	GO:0031936: negative regulation of chromatin silencing	9.45E-04
50	GO:0050482: arachidonic acid secretion	9.45E-04
51	GO:0006020: inositol metabolic process	9.45E-04
52	GO:0009723: response to ethylene	1.15E-03
53	GO:0070417: cellular response to cold	1.18E-03
54	GO:2000306: positive regulation of photomorphogenesis	1.25E-03
55	GO:0010600: regulation of auxin biosynthetic process	1.25E-03
56	GO:0030104: water homeostasis	1.25E-03
57	GO:0000003: reproduction	1.25E-03
58	GO:0016123: xanthophyll biosynthetic process	1.59E-03
59	GO:0048578: positive regulation of long-day photoperiodism, flowering	1.59E-03
60	GO:0009904: chloroplast accumulation movement	1.59E-03
61	GO:0006461: protein complex assembly	1.59E-03
62	GO:1901657: glycosyl compound metabolic process	1.91E-03
63	GO:0045962: positive regulation of development, heterochronic	1.96E-03
64	GO:0009635: response to herbicide	1.96E-03
65	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.35E-03
66	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.35E-03
67	GO:0009903: chloroplast avoidance movement	2.35E-03
68	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	2.35E-03
69	GO:0080111: DNA demethylation	2.77E-03
70	GO:0010161: red light signaling pathway	2.77E-03
71	GO:0006351: transcription, DNA-templated	2.79E-03
72	GO:0055114: oxidation-reduction process	3.04E-03
73	GO:0006644: phospholipid metabolic process	3.21E-03
74	GO:0010928: regulation of auxin mediated signaling pathway	3.21E-03
75	GO:0010078: maintenance of root meristem identity	3.21E-03
76	GO:0009704: de-etiolation	3.21E-03
77	GO:0006355: regulation of transcription, DNA-templated	3.51E-03
78	GO:0010099: regulation of photomorphogenesis	3.67E-03
79	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	3.67E-03
80	GO:0009827: plant-type cell wall modification	3.67E-03
81	GO:0007186: G-protein coupled receptor signaling pathway	3.67E-03
82	GO:0090333: regulation of stomatal closure	4.15E-03
83	GO:0009638: phototropism	4.65E-03
84	GO:0030042: actin filament depolymerization	4.65E-03
85	GO:0048354: mucilage biosynthetic process involved in seed coat development	4.65E-03
86	GO:0008356: asymmetric cell division	4.65E-03
87	GO:0042542: response to hydrogen peroxide	4.92E-03
88	GO:0009640: photomorphogenesis	5.12E-03
89	GO:0006949: syncytium formation	5.18E-03
90	GO:0006535: cysteine biosynthetic process from serine	5.18E-03
91	GO:0009688: abscisic acid biosynthetic process	5.18E-03
92	GO:0009641: shade avoidance	5.18E-03
93	GO:0008643: carbohydrate transport	5.54E-03
94	GO:0006970: response to osmotic stress	5.54E-03
95	GO:0046856: phosphatidylinositol dephosphorylation	5.72E-03
96	GO:0006816: calcium ion transport	5.72E-03
97	GO:0030148: sphingolipid biosynthetic process	5.72E-03
98	GO:0035556: intracellular signal transduction	5.99E-03
99	GO:0006812: cation transport	6.43E-03
100	GO:0009767: photosynthetic electron transport chain	6.86E-03
101	GO:0009785: blue light signaling pathway	6.86E-03
102	GO:0018107: peptidyl-threonine phosphorylation	6.86E-03
103	GO:0009718: anthocyanin-containing compound biosynthetic process	6.86E-03
104	GO:0009585: red, far-red light phototransduction	6.90E-03
105	GO:0044550: secondary metabolite biosynthetic process	7.37E-03
106	GO:0010207: photosystem II assembly	7.46E-03
107	GO:0007015: actin filament organization	7.46E-03
108	GO:0009887: animal organ morphogenesis	7.46E-03
109	GO:0009266: response to temperature stimulus	7.46E-03
110	GO:0007030: Golgi organization	8.08E-03
111	GO:0019853: L-ascorbic acid biosynthetic process	8.08E-03
112	GO:0090351: seedling development	8.08E-03
113	GO:0043086: negative regulation of catalytic activity	8.16E-03
114	GO:0005975: carbohydrate metabolic process	9.22E-03
115	GO:0019344: cysteine biosynthetic process	9.37E-03
116	GO:0032259: methylation	1.03E-02
117	GO:0061077: chaperone-mediated protein folding	1.07E-02
118	GO:0003333: amino acid transmembrane transport	1.07E-02
119	GO:0019748: secondary metabolic process	1.14E-02
120	GO:0071215: cellular response to abscisic acid stimulus	1.22E-02
121	GO:0009686: gibberellin biosynthetic process	1.22E-02
122	GO:0006012: galactose metabolic process	1.22E-02
123	GO:0045492: xylan biosynthetic process	1.29E-02
124	GO:0019722: calcium-mediated signaling	1.29E-02
125	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.37E-02
126	GO:0034220: ion transmembrane transport	1.44E-02
127	GO:0010118: stomatal movement	1.44E-02
128	GO:0008360: regulation of cell shape	1.52E-02
129	GO:0010182: sugar mediated signaling pathway	1.52E-02
130	GO:0006814: sodium ion transport	1.60E-02
131	GO:0042752: regulation of circadian rhythm	1.60E-02
132	GO:0009737: response to abscisic acid	1.65E-02
133	GO:0000302: response to reactive oxygen species	1.77E-02
134	GO:0010228: vegetative to reproductive phase transition of meristem	1.79E-02
135	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.91E-02
136	GO:0009739: response to gibberellin	1.91E-02
137	GO:0009908: flower development	1.98E-02
138	GO:0009828: plant-type cell wall loosening	2.03E-02
139	GO:0016126: sterol biosynthetic process	2.30E-02
140	GO:0009611: response to wounding	2.31E-02
141	GO:0010029: regulation of seed germination	2.39E-02
142	GO:0048573: photoperiodism, flowering	2.58E-02
143	GO:0006950: response to stress	2.58E-02
144	GO:0009658: chloroplast organization	2.64E-02
145	GO:0009817: defense response to fungus, incompatible interaction	2.77E-02
146	GO:0006811: ion transport	2.97E-02
147	GO:0009631: cold acclimation	3.08E-02
148	GO:0006865: amino acid transport	3.18E-02
149	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.39E-02
150	GO:0034599: cellular response to oxidative stress	3.39E-02
151	GO:0009651: response to salt stress	3.55E-02
152	GO:0051707: response to other organism	3.93E-02
153	GO:0045892: negative regulation of transcription, DNA-templated	3.97E-02
154	GO:0009965: leaf morphogenesis	4.27E-02
155	GO:0009664: plant-type cell wall organization	4.62E-02
156	GO:0006629: lipid metabolic process	4.81E-02
157	GO:0009408: response to heat	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
2	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
3	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
4	GO:0004567: beta-mannosidase activity	0.00E+00
5	GO:0080082: esculin beta-glucosidase activity	0.00E+00
6	GO:0015276: ligand-gated ion channel activity	0.00E+00
7	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
8	GO:0009899: ent-kaurene synthase activity	0.00E+00
9	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
10	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
11	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
12	GO:0019912: cyclin-dependent protein kinase activating kinase activity	0.00E+00
13	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
14	GO:0031409: pigment binding	8.58E-20
15	GO:0016168: chlorophyll binding	5.14E-16
16	GO:0046872: metal ion binding	2.71E-05
17	GO:0005515: protein binding	7.86E-05
18	GO:0000829: inositol heptakisphosphate kinase activity	1.80E-04
19	GO:0005227: calcium activated cation channel activity	1.80E-04
20	GO:0080079: cellobiose glucosidase activity	1.80E-04
21	GO:0008066: glutamate receptor activity	1.80E-04
22	GO:0000828: inositol hexakisphosphate kinase activity	1.80E-04
23	GO:0052631: sphingolipid delta-8 desaturase activity	1.80E-04
24	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	1.80E-04
25	GO:0008158: hedgehog receptor activity	1.80E-04
26	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	1.80E-04
27	GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor	1.80E-04
28	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	4.05E-04
29	GO:0016630: protochlorophyllide reductase activity	4.05E-04
30	GO:0015180: L-alanine transmembrane transporter activity	4.05E-04
31	GO:0050017: L-3-cyanoalanine synthase activity	4.05E-04
32	GO:0004565: beta-galactosidase activity	4.55E-04
33	GO:0005217: intracellular ligand-gated ion channel activity	5.74E-04
34	GO:0004970: ionotropic glutamate receptor activity	5.74E-04
35	GO:0046592: polyamine oxidase activity	6.61E-04
36	GO:0015189: L-lysine transmembrane transporter activity	9.45E-04
37	GO:0015181: arginine transmembrane transporter activity	9.45E-04
38	GO:0009882: blue light photoreceptor activity	9.45E-04
39	GO:0005313: L-glutamate transmembrane transporter activity	1.25E-03
40	GO:0004506: squalene monooxygenase activity	1.25E-03
41	GO:0004930: G-protein coupled receptor activity	1.25E-03
42	GO:0004623: phospholipase A2 activity	1.59E-03
43	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.59E-03
44	GO:0000156: phosphorelay response regulator activity	1.91E-03
45	GO:0015562: efflux transmembrane transporter activity	1.96E-03
46	GO:0004124: cysteine synthase activity	2.35E-03
47	GO:0005261: cation channel activity	2.35E-03
48	GO:0015297: antiporter activity	2.73E-03
49	GO:0102483: scopolin beta-glucosidase activity	2.84E-03
50	GO:0004033: aldo-keto reductase (NADP) activity	3.21E-03
51	GO:0003843: 1,3-beta-D-glucan synthase activity	3.67E-03
52	GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity	3.67E-03
53	GO:0071949: FAD binding	4.15E-03
54	GO:0000989: transcription factor activity, transcription factor binding	4.15E-03
55	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	4.15E-03
56	GO:0008422: beta-glucosidase activity	4.34E-03
57	GO:0003677: DNA binding	4.56E-03
58	GO:0008168: methyltransferase activity	4.81E-03
59	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	5.18E-03
60	GO:0016787: hydrolase activity	5.36E-03
61	GO:0047372: acylglycerol lipase activity	5.72E-03
62	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	6.28E-03
63	GO:0004022: alcohol dehydrogenase (NAD) activity	6.86E-03
64	GO:0005315: inorganic phosphate transmembrane transporter activity	6.86E-03
65	GO:0000155: phosphorelay sensor kinase activity	6.86E-03
66	GO:0005262: calcium channel activity	6.86E-03
67	GO:0008131: primary amine oxidase activity	7.46E-03
68	GO:0015171: amino acid transmembrane transporter activity	7.64E-03
69	GO:0003712: transcription cofactor activity	8.08E-03
70	GO:0004190: aspartic-type endopeptidase activity	8.08E-03
71	GO:0004672: protein kinase activity	8.71E-03
72	GO:0004674: protein serine/threonine kinase activity	1.00E-02
73	GO:0005216: ion channel activity	1.00E-02
74	GO:0008324: cation transmembrane transporter activity	1.00E-02
75	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.03E-02
76	GO:0004707: MAP kinase activity	1.07E-02
77	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.07E-02
78	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.27E-02
79	GO:0008514: organic anion transmembrane transporter activity	1.29E-02
80	GO:0008536: Ran GTPase binding	1.52E-02
81	GO:0046910: pectinesterase inhibitor activity	1.59E-02
82	GO:0010181: FMN binding	1.60E-02
83	GO:0048038: quinone binding	1.77E-02
84	GO:0003682: chromatin binding	2.79E-02
85	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.97E-02
86	GO:0004497: monooxygenase activity	3.27E-02
87	GO:0003993: acid phosphatase activity	3.39E-02
88	GO:0061630: ubiquitin protein ligase activity	3.44E-02
89	GO:0042393: histone binding	3.60E-02
90	GO:0004185: serine-type carboxypeptidase activity	3.93E-02
91	GO:0051537: 2 iron, 2 sulfur cluster binding	4.16E-02
92	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.22E-02
93	GO:0005198: structural molecule activity	4.27E-02
94	GO:0015293: symporter activity	4.27E-02

Rank	GO Term	Adjusted P value
1	GO:0009783: photosystem II antenna complex	0.00E+00
2	GO:0009522: photosystem I	1.96E-17
3	GO:0010287: plastoglobule	1.06E-15
4	GO:0030076: light-harvesting complex	2.21E-15
5	GO:0009535: chloroplast thylakoid membrane	5.88E-13
6	GO:0009579: thylakoid	1.60E-12
7	GO:0009534: chloroplast thylakoid	1.71E-12
8	GO:0009941: chloroplast envelope	2.44E-11
9	GO:0009517: PSII associated light-harvesting complex II	1.12E-07
10	GO:0009523: photosystem II	1.21E-07
11	GO:0016021: integral component of membrane	1.51E-05
12	GO:0016020: membrane	8.85E-05
13	GO:0009538: photosystem I reaction center	1.40E-04
14	GO:0009507: chloroplast	3.34E-04
15	GO:0042651: thylakoid membrane	7.77E-04
16	GO:0009898: cytoplasmic side of plasma membrane	1.25E-03
17	GO:0030660: Golgi-associated vesicle membrane	1.25E-03
18	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.25E-03
19	GO:0005798: Golgi-associated vesicle	1.96E-03
20	GO:0009533: chloroplast stromal thylakoid	2.77E-03
21	GO:0009986: cell surface	2.77E-03
22	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	3.21E-03
23	GO:0000148: 1,3-beta-D-glucan synthase complex	3.67E-03
24	GO:0005768: endosome	3.71E-03
25	GO:0005765: lysosomal membrane	5.72E-03
26	GO:0005886: plasma membrane	6.26E-03
27	GO:0031966: mitochondrial membrane	6.43E-03
28	GO:0005938: cell cortex	6.86E-03
29	GO:0005769: early endosome	8.71E-03
30	GO:0031410: cytoplasmic vesicle	1.14E-02
31	GO:0015629: actin cytoskeleton	1.22E-02
32	GO:0005623: cell	1.27E-02
33	GO:0009505: plant-type cell wall	2.24E-02
34	GO:0009707: chloroplast outer membrane	2.77E-02
35	GO:0005622: intracellular	4.58E-02
36	GO:0005618: cell wall	4.65E-02