co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G26130

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
2	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
3	GO:0071311: cellular response to acetate	0.00E+00
4	GO:0071260: cellular response to mechanical stimulus	0.00E+00
5	GO:0009877: nodulation	0.00E+00
6	GO:0043171: peptide catabolic process	0.00E+00
7	GO:0042906: xanthine transport	0.00E+00
8	GO:0010378: temperature compensation of the circadian clock	0.00E+00
9	GO:0030644: cellular chloride ion homeostasis	0.00E+00
10	GO:0009768: photosynthesis, light harvesting in photosystem I	7.83E-14
11	GO:0018298: protein-chromophore linkage	5.93E-11
12	GO:0009645: response to low light intensity stimulus	2.55E-08
13	GO:0010218: response to far red light	1.36E-07
14	GO:0010114: response to red light	4.79E-07
15	GO:0009644: response to high light intensity	6.14E-07
16	GO:0009769: photosynthesis, light harvesting in photosystem II	3.31E-06
17	GO:0009409: response to cold	4.63E-06
18	GO:0009637: response to blue light	5.51E-06
19	GO:0015979: photosynthesis	1.66E-05
20	GO:0007623: circadian rhythm	1.73E-05
21	GO:0009416: response to light stimulus	2.94E-05
22	GO:0042542: response to hydrogen peroxide	1.34E-04
23	GO:0080065: 4-alpha-methyl-delta7-sterol oxidation	2.51E-04
24	GO:0015812: gamma-aminobutyric acid transport	2.51E-04
25	GO:0032958: inositol phosphate biosynthetic process	2.51E-04
26	GO:0010286: heat acclimation	3.86E-04
27	GO:0009688: abscisic acid biosynthetic process	4.80E-04
28	GO:0015720: allantoin transport	5.53E-04
29	GO:0006883: cellular sodium ion homeostasis	5.53E-04
30	GO:0048255: mRNA stabilization	5.53E-04
31	GO:0051170: nuclear import	5.53E-04
32	GO:0015857: uracil transport	5.53E-04
33	GO:1902884: positive regulation of response to oxidative stress	5.53E-04
34	GO:0009817: defense response to fungus, incompatible interaction	6.31E-04
35	GO:1902448: positive regulation of shade avoidance	8.99E-04
36	GO:0042344: indole glucosinolate catabolic process	8.99E-04
37	GO:0006598: polyamine catabolic process	8.99E-04
38	GO:0071705: nitrogen compound transport	8.99E-04
39	GO:0071230: cellular response to amino acid stimulus	8.99E-04
40	GO:1901562: response to paraquat	8.99E-04
41	GO:0006355: regulation of transcription, DNA-templated	1.26E-03
42	GO:0006020: inositol metabolic process	1.28E-03
43	GO:0010601: positive regulation of auxin biosynthetic process	1.28E-03
44	GO:0010468: regulation of gene expression	1.28E-03
45	GO:0031936: negative regulation of chromatin silencing	1.28E-03
46	GO:1901332: negative regulation of lateral root development	1.28E-03
47	GO:0048511: rhythmic process	1.34E-03
48	GO:0010017: red or far-red light signaling pathway	1.46E-03
49	GO:0009687: abscisic acid metabolic process	1.71E-03
50	GO:0015743: malate transport	1.71E-03
51	GO:0009765: photosynthesis, light harvesting	1.71E-03
52	GO:2000306: positive regulation of photomorphogenesis	1.71E-03
53	GO:0010600: regulation of auxin biosynthetic process	1.71E-03
54	GO:1901002: positive regulation of response to salt stress	1.71E-03
55	GO:0030104: water homeostasis	1.71E-03
56	GO:0006970: response to osmotic stress	2.12E-03
57	GO:0016123: xanthophyll biosynthetic process	2.19E-03
58	GO:0048578: positive regulation of long-day photoperiodism, flowering	2.19E-03
59	GO:0080167: response to karrikin	2.63E-03
60	GO:0045962: positive regulation of development, heterochronic	2.70E-03
61	GO:0000741: karyogamy	2.70E-03
62	GO:0002238: response to molecule of fungal origin	2.70E-03
63	GO:0009635: response to herbicide	2.70E-03
64	GO:0009414: response to water deprivation	2.94E-03
65	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	3.24E-03
66	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.24E-03
67	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	3.24E-03
68	GO:0035556: intracellular signal transduction	3.29E-03
69	GO:0010038: response to metal ion	3.82E-03
70	GO:0010044: response to aluminum ion	3.82E-03
71	GO:0010161: red light signaling pathway	3.82E-03
72	GO:0048437: floral organ development	3.82E-03
73	GO:0010196: nonphotochemical quenching	3.82E-03
74	GO:0080111: DNA demethylation	3.82E-03
75	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.09E-03
76	GO:0009061: anaerobic respiration	4.44E-03
77	GO:0010928: regulation of auxin mediated signaling pathway	4.44E-03
78	GO:0042255: ribosome assembly	4.44E-03
79	GO:0009415: response to water	4.44E-03
80	GO:0010078: maintenance of root meristem identity	4.44E-03
81	GO:0009704: de-etiolation	4.44E-03
82	GO:0009737: response to abscisic acid	4.66E-03
83	GO:0009408: response to heat	4.76E-03
84	GO:0010099: regulation of photomorphogenesis	5.08E-03
85	GO:0009827: plant-type cell wall modification	5.08E-03
86	GO:0000160: phosphorelay signal transduction system	5.30E-03
87	GO:0034765: regulation of ion transmembrane transport	5.75E-03
88	GO:0090333: regulation of stomatal closure	5.75E-03
89	GO:0046916: cellular transition metal ion homeostasis	5.75E-03
90	GO:0009631: cold acclimation	5.83E-03
91	GO:0030042: actin filament depolymerization	6.46E-03
92	GO:0048354: mucilage biosynthetic process involved in seed coat development	6.46E-03
93	GO:0009641: shade avoidance	7.20E-03
94	GO:0010162: seed dormancy process	7.20E-03
95	GO:0009970: cellular response to sulfate starvation	7.20E-03
96	GO:0055062: phosphate ion homeostasis	7.20E-03
97	GO:0006995: cellular response to nitrogen starvation	7.20E-03
98	GO:0007064: mitotic sister chromatid cohesion	7.20E-03
99	GO:0046856: phosphatidylinositol dephosphorylation	7.96E-03
100	GO:0006816: calcium ion transport	7.96E-03
101	GO:0009682: induced systemic resistance	7.96E-03
102	GO:0052544: defense response by callose deposition in cell wall	7.96E-03
103	GO:0009640: photomorphogenesis	8.24E-03
104	GO:0016925: protein sumoylation	8.75E-03
105	GO:0008643: carbohydrate transport	8.92E-03
106	GO:0050826: response to freezing	9.57E-03
107	GO:0009718: anthocyanin-containing compound biosynthetic process	9.57E-03
108	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	9.57E-03
109	GO:0009735: response to cytokinin	9.94E-03
110	GO:0000165: MAPK cascade	9.99E-03
111	GO:0009266: response to temperature stimulus	1.04E-02
112	GO:0010207: photosystem II assembly	1.04E-02
113	GO:0007015: actin filament organization	1.04E-02
114	GO:0009585: red, far-red light phototransduction	1.11E-02
115	GO:0090351: seedling development	1.13E-02
116	GO:0019853: L-ascorbic acid biosynthetic process	1.13E-02
117	GO:0009651: response to salt stress	1.23E-02
118	GO:0007165: signal transduction	1.29E-02
119	GO:0044550: secondary metabolite biosynthetic process	1.35E-02
120	GO:0016575: histone deacetylation	1.41E-02
121	GO:0006874: cellular calcium ion homeostasis	1.41E-02
122	GO:0009695: jasmonic acid biosynthetic process	1.41E-02
123	GO:0010431: seed maturation	1.50E-02
124	GO:0009269: response to desiccation	1.50E-02
125	GO:0003333: amino acid transmembrane transport	1.50E-02
126	GO:0006012: galactose metabolic process	1.71E-02
127	GO:0071215: cellular response to abscisic acid stimulus	1.71E-02
128	GO:0006351: transcription, DNA-templated	1.75E-02
129	GO:0045492: xylan biosynthetic process	1.81E-02
130	GO:0019722: calcium-mediated signaling	1.81E-02
131	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.92E-02
132	GO:0070417: cellular response to cold	1.92E-02
133	GO:0034220: ion transmembrane transport	2.02E-02
134	GO:0010197: polar nucleus fusion	2.14E-02
135	GO:0010182: sugar mediated signaling pathway	2.14E-02
136	GO:0006814: sodium ion transport	2.25E-02
137	GO:0042752: regulation of circadian rhythm	2.25E-02
138	GO:0009556: microsporogenesis	2.36E-02
139	GO:0006635: fatty acid beta-oxidation	2.48E-02
140	GO:0000302: response to reactive oxygen species	2.48E-02
141	GO:0032502: developmental process	2.60E-02
142	GO:0016567: protein ubiquitination	2.65E-02
143	GO:1901657: glycosyl compound metabolic process	2.72E-02
144	GO:0019760: glucosinolate metabolic process	2.85E-02
145	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.08E-02
146	GO:0009739: response to gibberellin	3.08E-02
147	GO:0016126: sterol biosynthetic process	3.23E-02
148	GO:0009617: response to bacterium	3.28E-02
149	GO:0010029: regulation of seed germination	3.36E-02
150	GO:0009908: flower development	3.59E-02
151	GO:0006950: response to stress	3.62E-02
152	GO:0015995: chlorophyll biosynthetic process	3.62E-02
153	GO:0048573: photoperiodism, flowering	3.62E-02
154	GO:0048481: plant ovule development	3.90E-02
155	GO:0009738: abscisic acid-activated signaling pathway	3.91E-02
156	GO:0009611: response to wounding	4.18E-02
157	GO:0009658: chloroplast organization	4.24E-02
158	GO:0007568: aging	4.32E-02
159	GO:0010119: regulation of stomatal movement	4.32E-02
160	GO:0016051: carbohydrate biosynthetic process	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
2	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
3	GO:0019912: cyclin-dependent protein kinase activating kinase activity	0.00E+00
4	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
5	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
6	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
7	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
8	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
9	GO:0004567: beta-mannosidase activity	0.00E+00
10	GO:0080082: esculin beta-glucosidase activity	0.00E+00
11	GO:0015276: ligand-gated ion channel activity	0.00E+00
12	GO:0031409: pigment binding	2.85E-14
13	GO:0016168: chlorophyll binding	2.35E-11
14	GO:0005253: anion channel activity	4.33E-05
15	GO:0004707: MAP kinase activity	1.00E-04
16	GO:0005515: protein binding	2.05E-04
17	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	2.51E-04
18	GO:0000829: inositol heptakisphosphate kinase activity	2.51E-04
19	GO:0010013: N-1-naphthylphthalamic acid binding	2.51E-04
20	GO:0080079: cellobiose glucosidase activity	2.51E-04
21	GO:0017091: AU-rich element binding	2.51E-04
22	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	2.51E-04
23	GO:0046870: cadmium ion binding	2.51E-04
24	GO:0008066: glutamate receptor activity	2.51E-04
25	GO:0000828: inositol hexakisphosphate kinase activity	2.51E-04
26	GO:0070006: metalloaminopeptidase activity	2.51E-04
27	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	2.51E-04
28	GO:0005244: voltage-gated ion channel activity	2.51E-04
29	GO:0046872: metal ion binding	4.15E-04
30	GO:0032791: lead ion binding	5.53E-04
31	GO:0005274: allantoin uptake transmembrane transporter activity	5.53E-04
32	GO:0047216: inositol 3-alpha-galactosyltransferase activity	5.53E-04
33	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	5.53E-04
34	GO:0015180: L-alanine transmembrane transporter activity	5.53E-04
35	GO:0004096: catalase activity	8.99E-04
36	GO:0046592: polyamine oxidase activity	8.99E-04
37	GO:0019948: SUMO activating enzyme activity	8.99E-04
38	GO:0017150: tRNA dihydrouridine synthase activity	8.99E-04
39	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.28E-03
40	GO:0004300: enoyl-CoA hydratase activity	1.28E-03
41	GO:0015189: L-lysine transmembrane transporter activity	1.28E-03
42	GO:0000254: C-4 methylsterol oxidase activity	1.28E-03
43	GO:0015181: arginine transmembrane transporter activity	1.28E-03
44	GO:0015210: uracil transmembrane transporter activity	1.71E-03
45	GO:0005313: L-glutamate transmembrane transporter activity	1.71E-03
46	GO:0042277: peptide binding	1.71E-03
47	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	2.19E-03
48	GO:0005247: voltage-gated chloride channel activity	2.70E-03
49	GO:0004629: phospholipase C activity	2.70E-03
50	GO:0015562: efflux transmembrane transporter activity	2.70E-03
51	GO:0019137: thioglucosidase activity	2.70E-03
52	GO:0000156: phosphorelay response regulator activity	3.05E-03
53	GO:0004435: phosphatidylinositol phospholipase C activity	3.24E-03
54	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.64E-03
55	GO:0015140: malate transmembrane transporter activity	3.82E-03
56	GO:0004033: aldo-keto reductase (NADP) activity	4.44E-03
57	GO:0004525: ribonuclease III activity	4.44E-03
58	GO:0102483: scopolin beta-glucosidase activity	4.55E-03
59	GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity	5.08E-03
60	GO:0005267: potassium channel activity	5.08E-03
61	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	5.08E-03
62	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	5.75E-03
63	GO:0071949: FAD binding	5.75E-03
64	GO:0000989: transcription factor activity, transcription factor binding	5.75E-03
65	GO:0008422: beta-glucosidase activity	6.98E-03
66	GO:0004177: aminopeptidase activity	7.96E-03
67	GO:0047372: acylglycerol lipase activity	7.96E-03
68	GO:0008270: zinc ion binding	8.31E-03
69	GO:0003677: DNA binding	8.47E-03
70	GO:0003700: transcription factor activity, sequence-specific DNA binding	8.64E-03
71	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	8.75E-03
72	GO:0005262: calcium channel activity	9.57E-03
73	GO:0004565: beta-galactosidase activity	9.57E-03
74	GO:0008081: phosphoric diester hydrolase activity	9.57E-03
75	GO:0005315: inorganic phosphate transmembrane transporter activity	9.57E-03
76	GO:0031624: ubiquitin conjugating enzyme binding	1.04E-02
77	GO:0008131: primary amine oxidase activity	1.04E-02
78	GO:0003712: transcription cofactor activity	1.13E-02
79	GO:0005217: intracellular ligand-gated ion channel activity	1.13E-02
80	GO:0004970: ionotropic glutamate receptor activity	1.13E-02
81	GO:0004497: monooxygenase activity	1.22E-02
82	GO:0061630: ubiquitin protein ligase activity	1.30E-02
83	GO:0004407: histone deacetylase activity	1.31E-02
84	GO:0008324: cation transmembrane transporter activity	1.41E-02
85	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.50E-02
86	GO:0016874: ligase activity	1.50E-02
87	GO:0022857: transmembrane transporter activity	1.50E-02
88	GO:0003727: single-stranded RNA binding	1.81E-02
89	GO:0008514: organic anion transmembrane transporter activity	1.81E-02
90	GO:0015297: antiporter activity	2.63E-02
91	GO:0005351: sugar:proton symporter activity	2.69E-02
92	GO:0005506: iron ion binding	3.18E-02
93	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.18E-02
94	GO:0050897: cobalt ion binding	4.32E-02
95	GO:0003682: chromatin binding	4.48E-02
96	GO:0003993: acid phosphatase activity	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0009522: photosystem I	1.83E-12
2	GO:0030076: light-harvesting complex	2.21E-12
3	GO:0010287: plastoglobule	6.14E-10
4	GO:0009941: chloroplast envelope	4.20E-07
5	GO:0009523: photosystem II	4.35E-07
6	GO:0016021: integral component of membrane	1.51E-06
7	GO:0009579: thylakoid	7.48E-06
8	GO:0009534: chloroplast thylakoid	7.78E-06
9	GO:0009535: chloroplast thylakoid membrane	4.04E-05
10	GO:0009517: PSII associated light-harvesting complex II	4.33E-05
11	GO:0042651: thylakoid membrane	8.68E-05
12	GO:0009783: photosystem II antenna complex	2.51E-04
13	GO:0016020: membrane	5.43E-04
14	GO:0009898: cytoplasmic side of plasma membrane	1.71E-03
15	GO:0032586: protein storage vacuole membrane	1.71E-03
16	GO:0034707: chloride channel complex	2.70E-03
17	GO:0009533: chloroplast stromal thylakoid	3.82E-03
18	GO:0005777: peroxisome	3.82E-03
19	GO:0000151: ubiquitin ligase complex	5.04E-03
20	GO:0000326: protein storage vacuole	5.08E-03
21	GO:0010494: cytoplasmic stress granule	5.75E-03
22	GO:0031090: organelle membrane	5.75E-03
23	GO:0009507: chloroplast	1.26E-02
24	GO:0015629: actin cytoskeleton	1.71E-02
25	GO:0031965: nuclear membrane	2.36E-02
26	GO:0005622: intracellular	2.69E-02
27	GO:0005773: vacuole	3.19E-02
28	GO:0000932: P-body	3.23E-02
29	GO:0005634: nucleus	3.33E-02
30	GO:0000786: nucleosome	4.46E-02
31	GO:0009506: plasmodesma	4.81E-02