GO Enrichment Analysis of Co-expressed Genes with
AT4G25630
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090069: regulation of ribosome biogenesis | 0.00E+00 |
| 2 | GO:0006412: translation | 9.86E-08 |
| 3 | GO:0000494: box C/D snoRNA 3'-end processing | 1.48E-05 |
| 4 | GO:2000232: regulation of rRNA processing | 1.48E-05 |
| 5 | GO:1990258: histone glutamine methylation | 1.48E-05 |
| 6 | GO:0055129: L-proline biosynthetic process | 3.88E-05 |
| 7 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.88E-05 |
| 8 | GO:0008652: cellular amino acid biosynthetic process | 6.95E-05 |
| 9 | GO:0009651: response to salt stress | 9.12E-05 |
| 10 | GO:0042274: ribosomal small subunit biogenesis | 1.45E-04 |
| 11 | GO:0010043: response to zinc ion | 1.48E-04 |
| 12 | GO:0031167: rRNA methylation | 1.88E-04 |
| 13 | GO:0046686: response to cadmium ion | 2.02E-04 |
| 14 | GO:0006561: proline biosynthetic process | 2.34E-04 |
| 15 | GO:0009088: threonine biosynthetic process | 2.82E-04 |
| 16 | GO:0006364: rRNA processing | 2.90E-04 |
| 17 | GO:0001510: RNA methylation | 4.37E-04 |
| 18 | GO:0010162: seed dormancy process | 6.08E-04 |
| 19 | GO:0006413: translational initiation | 6.53E-04 |
| 20 | GO:0009089: lysine biosynthetic process via diaminopimelate | 6.67E-04 |
| 21 | GO:0006352: DNA-templated transcription, initiation | 6.67E-04 |
| 22 | GO:0010582: floral meristem determinacy | 7.29E-04 |
| 23 | GO:0006626: protein targeting to mitochondrion | 7.91E-04 |
| 24 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.05E-03 |
| 25 | GO:0042254: ribosome biogenesis | 1.07E-03 |
| 26 | GO:0006334: nucleosome assembly | 1.19E-03 |
| 27 | GO:0007005: mitochondrion organization | 1.26E-03 |
| 28 | GO:0009294: DNA mediated transformation | 1.34E-03 |
| 29 | GO:0040007: growth | 1.34E-03 |
| 30 | GO:0008033: tRNA processing | 1.57E-03 |
| 31 | GO:0006635: fatty acid beta-oxidation | 1.89E-03 |
| 32 | GO:0009735: response to cytokinin | 3.03E-03 |
| 33 | GO:0009640: photomorphogenesis | 4.04E-03 |
| 34 | GO:0000154: rRNA modification | 4.37E-03 |
| 35 | GO:0016569: covalent chromatin modification | 6.05E-03 |
| 36 | GO:0015031: protein transport | 8.47E-03 |
| 37 | GO:0080167: response to karrikin | 1.46E-02 |
| 38 | GO:0009793: embryo development ending in seed dormancy | 1.55E-02 |
| 39 | GO:0009408: response to heat | 1.93E-02 |
| 40 | GO:0009908: flower development | 2.70E-02 |
| 41 | GO:0006414: translational elongation | 3.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004735: pyrroline-5-carboxylate reductase activity | 0.00E+00 |
| 2 | GO:0003735: structural constituent of ribosome | 6.61E-08 |
| 3 | GO:0030515: snoRNA binding | 2.01E-06 |
| 4 | GO:1990259: histone-glutamine methyltransferase activity | 1.48E-05 |
| 5 | GO:0030371: translation repressor activity | 1.48E-05 |
| 6 | GO:0008649: rRNA methyltransferase activity | 6.95E-05 |
| 7 | GO:0003723: RNA binding | 7.07E-05 |
| 8 | GO:0004072: aspartate kinase activity | 1.05E-04 |
| 9 | GO:0003729: mRNA binding | 1.87E-04 |
| 10 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 2.34E-04 |
| 11 | GO:0004017: adenylate kinase activity | 2.82E-04 |
| 12 | GO:0003743: translation initiation factor activity | 8.09E-04 |
| 13 | GO:0004407: histone deacetylase activity | 1.05E-03 |
| 14 | GO:0005528: FK506 binding | 1.05E-03 |
| 15 | GO:0003713: transcription coactivator activity | 1.65E-03 |
| 16 | GO:0010181: FMN binding | 1.73E-03 |
| 17 | GO:0016597: amino acid binding | 2.33E-03 |
| 18 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.90E-03 |
| 19 | GO:0042393: histone binding | 3.71E-03 |
| 20 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.49E-03 |
| 21 | GO:0005507: copper ion binding | 4.69E-03 |
| 22 | GO:0008026: ATP-dependent helicase activity | 6.57E-03 |
| 23 | GO:0000166: nucleotide binding | 2.90E-02 |
| 24 | GO:0030246: carbohydrate binding | 3.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005730: nucleolus | 1.20E-14 |
| 2 | GO:0022626: cytosolic ribosome | 1.94E-08 |
| 3 | GO:0031428: box C/D snoRNP complex | 9.67E-07 |
| 4 | GO:0022625: cytosolic large ribosomal subunit | 3.75E-06 |
| 5 | GO:0005840: ribosome | 6.16E-06 |
| 6 | GO:0005852: eukaryotic translation initiation factor 3 complex | 8.48E-06 |
| 7 | GO:0032040: small-subunit processome | 1.01E-05 |
| 8 | GO:0070545: PeBoW complex | 3.88E-05 |
| 9 | GO:0009506: plasmodesma | 2.41E-04 |
| 10 | GO:0031597: cytosolic proteasome complex | 2.82E-04 |
| 11 | GO:0005829: cytosol | 3.64E-04 |
| 12 | GO:0008180: COP9 signalosome | 4.93E-04 |
| 13 | GO:0015030: Cajal body | 5.49E-04 |
| 14 | GO:0022627: cytosolic small ribosomal subunit | 9.10E-04 |
| 15 | GO:0005758: mitochondrial intermembrane space | 1.05E-03 |
| 16 | GO:0015934: large ribosomal subunit | 3.20E-03 |
| 17 | GO:0005654: nucleoplasm | 7.24E-03 |
| 18 | GO:0005737: cytoplasm | 1.09E-02 |
| 19 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.34E-02 |
| 20 | GO:0005743: mitochondrial inner membrane | 1.83E-02 |
| 21 | GO:0005618: cell wall | 2.65E-02 |
| 22 | GO:0005773: vacuole | 3.55E-02 |
| 23 | GO:0016020: membrane | 4.30E-02 |
| 24 | GO:0005622: intracellular | 4.37E-02 |