Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G25620

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)0.00E+00
2GO:0080127: fruit septum development0.00E+00
3GO:0006792: regulation of sulfur utilization0.00E+00
4GO:1901485: positive regulation of transcription factor catabolic process0.00E+00
5GO:0010200: response to chitin1.81E-08
6GO:0009751: response to salicylic acid1.43E-06
7GO:2000022: regulation of jasmonic acid mediated signaling pathway5.83E-06
8GO:0009753: response to jasmonic acid3.01E-05
9GO:0050691: regulation of defense response to virus by host6.42E-05
10GO:0033481: galacturonate biosynthetic process6.42E-05
11GO:0016119: carotene metabolic process6.42E-05
12GO:1903507: negative regulation of nucleic acid-templated transcription7.90E-05
13GO:0031347: regulation of defense response1.30E-04
14GO:0007154: cell communication1.55E-04
15GO:0071497: cellular response to freezing1.55E-04
16GO:0019419: sulfate reduction2.63E-04
17GO:0000271: polysaccharide biosynthetic process3.32E-04
18GO:0009741: response to brassinosteroid3.58E-04
19GO:0006357: regulation of transcription from RNA polymerase II promoter4.19E-04
20GO:0030154: cell differentiation4.32E-04
21GO:0046345: abscisic acid catabolic process5.10E-04
22GO:2000762: regulation of phenylpropanoid metabolic process6.45E-04
23GO:0016123: xanthophyll biosynthetic process6.45E-04
24GO:0010438: cellular response to sulfur starvation6.45E-04
25GO:0010411: xyloglucan metabolic process7.39E-04
26GO:0060918: auxin transport7.90E-04
27GO:1900425: negative regulation of defense response to bacterium7.90E-04
28GO:0003006: developmental process involved in reproduction7.90E-04
29GO:0009723: response to ethylene1.04E-03
30GO:0051510: regulation of unidimensional cell growth1.10E-03
31GO:0050829: defense response to Gram-negative bacterium1.10E-03
32GO:0010439: regulation of glucosinolate biosynthetic process1.26E-03
33GO:0030162: regulation of proteolysis1.26E-03
34GO:2000031: regulation of salicylic acid mediated signaling pathway1.44E-03
35GO:0010099: regulation of photomorphogenesis1.44E-03
36GO:0051865: protein autoubiquitination1.62E-03
37GO:0048507: meristem development1.62E-03
38GO:0009585: red, far-red light phototransduction1.73E-03
39GO:0009638: phototropism1.81E-03
40GO:0000103: sulfate assimilation2.01E-03
41GO:0043069: negative regulation of programmed cell death2.01E-03
42GO:0000272: polysaccharide catabolic process2.21E-03
43GO:0000038: very long-chain fatty acid metabolic process2.21E-03
44GO:0009733: response to auxin2.25E-03
45GO:0016024: CDP-diacylglycerol biosynthetic process2.42E-03
46GO:0010582: floral meristem determinacy2.42E-03
47GO:0016567: protein ubiquitination2.61E-03
48GO:0018107: peptidyl-threonine phosphorylation2.64E-03
49GO:0048467: gynoecium development2.87E-03
50GO:0034605: cellular response to heat2.87E-03
51GO:0010143: cutin biosynthetic process2.87E-03
52GO:0002237: response to molecule of bacterial origin2.87E-03
53GO:0009969: xyloglucan biosynthetic process3.09E-03
54GO:0009225: nucleotide-sugar metabolic process3.09E-03
55GO:0006355: regulation of transcription, DNA-templated3.56E-03
56GO:0019344: cysteine biosynthetic process3.57E-03
57GO:0009738: abscisic acid-activated signaling pathway3.63E-03
58GO:0010017: red or far-red light signaling pathway4.34E-03
59GO:0040007: growth4.60E-03
60GO:0009739: response to gibberellin4.69E-03
61GO:0019722: calcium-mediated signaling4.87E-03
62GO:0010087: phloem or xylem histogenesis5.43E-03
63GO:0009958: positive gravitropism5.72E-03
64GO:0010268: brassinosteroid homeostasis5.72E-03
65GO:0045489: pectin biosynthetic process5.72E-03
66GO:0009826: unidimensional cell growth6.24E-03
67GO:0009791: post-embryonic development6.31E-03
68GO:0016132: brassinosteroid biosynthetic process6.61E-03
69GO:0006952: defense response7.45E-03
70GO:0009639: response to red or far red light7.55E-03
71GO:0009828: plant-type cell wall loosening7.55E-03
72GO:0016125: sterol metabolic process7.55E-03
73GO:0019760: glucosinolate metabolic process7.55E-03
74GO:0007267: cell-cell signaling7.88E-03
75GO:0001666: response to hypoxia8.54E-03
76GO:0009788: negative regulation of abscisic acid-activated signaling pathway8.88E-03
77GO:0071555: cell wall organization9.27E-03
78GO:0048573: photoperiodism, flowering9.57E-03
79GO:0045454: cell redox homeostasis9.62E-03
80GO:0016311: dephosphorylation9.93E-03
81GO:0048767: root hair elongation1.07E-02
82GO:0010218: response to far red light1.10E-02
83GO:0048527: lateral root development1.14E-02
84GO:0016051: carbohydrate biosynthetic process1.22E-02
85GO:0042542: response to hydrogen peroxide1.41E-02
86GO:0010114: response to red light1.45E-02
87GO:0042546: cell wall biogenesis1.50E-02
88GO:0009873: ethylene-activated signaling pathway1.54E-02
89GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.66E-02
90GO:0006486: protein glycosylation1.80E-02
91GO:0051603: proteolysis involved in cellular protein catabolic process1.84E-02
92GO:0009611: response to wounding2.16E-02
93GO:0018105: peptidyl-serine phosphorylation2.36E-02
94GO:0009742: brassinosteroid mediated signaling pathway2.41E-02
95GO:0006633: fatty acid biosynthetic process3.19E-02
96GO:0006351: transcription, DNA-templated3.49E-02
97GO:0050832: defense response to fungus3.65E-02
98GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.69E-02
99GO:0009414: response to water deprivation4.17E-02
100GO:0042742: defense response to bacterium4.27E-02
RankGO TermAdjusted P value
1GO:0044212: transcription regulatory region DNA binding5.37E-05
2GO:0080132: fatty acid alpha-hydroxylase activity6.42E-05
3GO:0043565: sequence-specific DNA binding1.07E-04
4GO:0009973: adenylyl-sulfate reductase activity1.55E-04
5GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity1.55E-04
6GO:0010291: carotene beta-ring hydroxylase activity1.55E-04
7GO:0033741: adenylyl-sulfate reductase (glutathione) activity1.55E-04
8GO:0003714: transcription corepressor activity1.75E-04
9GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.89E-04
10GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.27E-04
11GO:0010295: (+)-abscisic acid 8'-hydroxylase activity2.63E-04
12GO:0033843: xyloglucan 6-xylosyltransferase activity3.82E-04
13GO:0050378: UDP-glucuronate 4-epimerase activity5.10E-04
14GO:0035252: UDP-xylosyltransferase activity7.90E-04
15GO:0010427: abscisic acid binding7.90E-04
16GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity7.90E-04
17GO:0004366: glycerol-3-phosphate O-acyltransferase activity7.90E-04
18GO:0016161: beta-amylase activity9.40E-04
19GO:0004864: protein phosphatase inhibitor activity2.01E-03
20GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.87E-03
21GO:0016758: transferase activity, transferring hexosyl groups2.98E-03
22GO:0003712: transcription cofactor activity3.09E-03
23GO:0004842: ubiquitin-protein transferase activity3.09E-03
24GO:0008134: transcription factor binding3.57E-03
25GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity4.34E-03
26GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds5.38E-03
27GO:0004402: histone acetyltransferase activity5.43E-03
28GO:0004872: receptor activity6.31E-03
29GO:0016762: xyloglucan:xyloglucosyl transferase activity6.61E-03
30GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor7.24E-03
31GO:0016791: phosphatase activity7.55E-03
32GO:0005506: iron ion binding9.08E-03
33GO:0016798: hydrolase activity, acting on glycosyl bonds9.57E-03
34GO:0030247: polysaccharide binding9.57E-03
35GO:0003700: transcription factor activity, sequence-specific DNA binding1.43E-02
36GO:0004185: serine-type carboxypeptidase activity1.45E-02
37GO:0043621: protein self-association1.54E-02
38GO:0016298: lipase activity1.84E-02
39GO:0031625: ubiquitin protein ligase binding1.93E-02
40GO:0015035: protein disulfide oxidoreductase activity2.36E-02
41GO:0016746: transferase activity, transferring acyl groups2.36E-02
42GO:0005515: protein binding3.78E-02
43GO:0042802: identical protein binding4.04E-02
44GO:0016757: transferase activity, transferring glycosyl groups4.31E-02
45GO:0003677: DNA binding4.60E-02
46GO:0003824: catalytic activity4.68E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0009505: plant-type cell wall1.07E-05
3GO:0005615: extracellular space5.80E-04
4GO:0046658: anchored component of plasma membrane7.16E-04
5GO:0005794: Golgi apparatus2.54E-03
6GO:0048046: apoplast3.57E-03
7GO:0009506: plasmodesma3.85E-03
8GO:0005618: cell wall4.15E-03
9GO:0031225: anchored component of membrane6.65E-03
10GO:0032580: Golgi cisterna membrane7.55E-03
11GO:0019005: SCF ubiquitin ligase complex1.03E-02
12GO:0016021: integral component of membrane3.11E-02
13GO:0005802: trans-Golgi network3.39E-02
14GO:0005576: extracellular region3.84E-02
15GO:0005768: endosome3.85E-02
Gene type



Gene DE type