Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G25320

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1904281: positive regulation of transcription from RNA polymerase V promoter0.00E+00
2GO:1990280: RNA localization to chromatin0.00E+00
3GO:1903415: flavonoid transport from endoplasmic reticulum to plant-type vacuole0.00E+00
4GO:1902466: positive regulation of histone H3-K27 trimethylation8.12E-06
5GO:0044090: positive regulation of vacuole organization8.12E-06
6GO:1903705: positive regulation of production of siRNA involved in RNA interference8.12E-06
7GO:0010501: RNA secondary structure unwinding1.85E-05
8GO:0032012: regulation of ARF protein signal transduction3.99E-05
9GO:0006346: methylation-dependent chromatin silencing8.58E-05
10GO:0015743: malate transport8.58E-05
11GO:0035194: posttranscriptional gene silencing by RNA1.41E-04
12GO:0032508: DNA duplex unwinding2.37E-04
13GO:0044030: regulation of DNA methylation2.71E-04
14GO:0001708: cell fate specification3.07E-04
15GO:0009718: anthocyanin-containing compound biosynthetic process4.98E-04
16GO:0080188: RNA-directed DNA methylation5.80E-04
17GO:0009561: megagametogenesis8.91E-04
18GO:0009791: post-embryonic development1.13E-03
19GO:0009631: cold acclimation1.97E-03
20GO:0006364: rRNA processing3.04E-03
21GO:0009553: embryo sac development3.78E-03
22GO:0006396: RNA processing3.94E-03
23GO:0000398: mRNA splicing, via spliceosome4.26E-03
24GO:0006413: translational initiation5.35E-03
25GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process6.06E-03
26GO:0010468: regulation of gene expression6.34E-03
27GO:0009826: unidimensional cell growth7.40E-03
28GO:0016192: vesicle-mediated transport9.14E-03
29GO:0006412: translation1.68E-02
30GO:0055085: transmembrane transport2.06E-02
31GO:0015031: protein transport3.42E-02
32GO:0009409: response to cold3.58E-02
RankGO TermAdjusted P value
1GO:0008026: ATP-dependent helicase activity4.70E-06
2GO:0004004: ATP-dependent RNA helicase activity4.96E-05
3GO:0005253: anion channel activity8.58E-05
4GO:0005086: ARF guanyl-nucleotide exchange factor activity8.58E-05
5GO:0005085: guanyl-nucleotide exchange factor activity2.04E-04
6GO:0015140: malate transmembrane transporter activity2.04E-04
7GO:0000175: 3'-5'-exoribonuclease activity4.98E-04
8GO:0003729: mRNA binding5.72E-04
9GO:0008408: 3'-5' exonuclease activity7.53E-04
10GO:0003727: single-stranded RNA binding8.91E-04
11GO:0016853: isomerase activity1.08E-03
12GO:0000166: nucleotide binding1.62E-03
13GO:0003676: nucleic acid binding2.02E-03
14GO:0003723: RNA binding4.53E-03
15GO:0003743: translation initiation factor activity6.25E-03
16GO:0003924: GTPase activity1.16E-02
17GO:0005525: GTP binding2.48E-02
18GO:0005215: transporter activity3.10E-02
19GO:0003735: structural constituent of ribosome4.71E-02
RankGO TermAdjusted P value
1GO:0005847: mRNA cleavage and polyadenylation specificity factor complex1.12E-04
2GO:0019898: extrinsic component of membrane1.13E-03
3GO:0015934: large ribosomal subunit1.97E-03
4GO:0090406: pollen tube2.49E-03
5GO:0005622: intracellular2.84E-03
6GO:0005654: nucleoplasm4.42E-03
7GO:0009705: plant-type vacuole membrane5.61E-03
8GO:0005730: nucleolus4.19E-02
Gene type



Gene DE type