GO Enrichment Analysis of Co-expressed Genes with
AT4G25050
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 2 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 3 | GO:0090391: granum assembly | 1.58E-06 |
| 4 | GO:0015995: chlorophyll biosynthetic process | 2.39E-06 |
| 5 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.53E-06 |
| 6 | GO:0051513: regulation of monopolar cell growth | 3.77E-06 |
| 7 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.37E-05 |
| 8 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.83E-05 |
| 9 | GO:0009828: plant-type cell wall loosening | 4.46E-05 |
| 10 | GO:0010206: photosystem II repair | 7.31E-05 |
| 11 | GO:0010207: photosystem II assembly | 1.91E-04 |
| 12 | GO:0006898: receptor-mediated endocytosis | 2.08E-04 |
| 13 | GO:0010541: acropetal auxin transport | 2.08E-04 |
| 14 | GO:0001736: establishment of planar polarity | 2.08E-04 |
| 15 | GO:0009664: plant-type cell wall organization | 2.45E-04 |
| 16 | GO:0010160: formation of animal organ boundary | 3.48E-04 |
| 17 | GO:0016045: detection of bacterium | 3.48E-04 |
| 18 | GO:0010359: regulation of anion channel activity | 3.48E-04 |
| 19 | GO:0045493: xylan catabolic process | 3.48E-04 |
| 20 | GO:0015979: photosynthesis | 3.49E-04 |
| 21 | GO:0080022: primary root development | 4.99E-04 |
| 22 | GO:0034220: ion transmembrane transport | 4.99E-04 |
| 23 | GO:0080170: hydrogen peroxide transmembrane transport | 5.01E-04 |
| 24 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 5.01E-04 |
| 25 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 5.01E-04 |
| 26 | GO:0009958: positive gravitropism | 5.37E-04 |
| 27 | GO:0030104: water homeostasis | 6.66E-04 |
| 28 | GO:0009913: epidermal cell differentiation | 1.03E-03 |
| 29 | GO:0060918: auxin transport | 1.03E-03 |
| 30 | GO:0006751: glutathione catabolic process | 1.03E-03 |
| 31 | GO:0017148: negative regulation of translation | 1.23E-03 |
| 32 | GO:0009826: unidimensional cell growth | 1.39E-03 |
| 33 | GO:1900056: negative regulation of leaf senescence | 1.44E-03 |
| 34 | GO:0010196: nonphotochemical quenching | 1.44E-03 |
| 35 | GO:0080167: response to karrikin | 1.90E-03 |
| 36 | GO:0009926: auxin polar transport | 1.94E-03 |
| 37 | GO:0006783: heme biosynthetic process | 2.14E-03 |
| 38 | GO:0009638: phototropism | 2.39E-03 |
| 39 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.65E-03 |
| 40 | GO:0048829: root cap development | 2.65E-03 |
| 41 | GO:0006949: syncytium formation | 2.65E-03 |
| 42 | GO:0052544: defense response by callose deposition in cell wall | 2.93E-03 |
| 43 | GO:1903507: negative regulation of nucleic acid-templated transcription | 2.93E-03 |
| 44 | GO:0048765: root hair cell differentiation | 2.93E-03 |
| 45 | GO:0010015: root morphogenesis | 2.93E-03 |
| 46 | GO:0009773: photosynthetic electron transport in photosystem I | 2.93E-03 |
| 47 | GO:0008361: regulation of cell size | 3.21E-03 |
| 48 | GO:0009785: blue light signaling pathway | 3.50E-03 |
| 49 | GO:0030048: actin filament-based movement | 3.50E-03 |
| 50 | GO:0010588: cotyledon vascular tissue pattern formation | 3.50E-03 |
| 51 | GO:0009624: response to nematode | 3.69E-03 |
| 52 | GO:0010540: basipetal auxin transport | 3.80E-03 |
| 53 | GO:0010143: cutin biosynthetic process | 3.80E-03 |
| 54 | GO:0006833: water transport | 4.42E-03 |
| 55 | GO:0051017: actin filament bundle assembly | 4.74E-03 |
| 56 | GO:0007017: microtubule-based process | 5.07E-03 |
| 57 | GO:0003333: amino acid transmembrane transport | 5.42E-03 |
| 58 | GO:0048511: rhythmic process | 5.42E-03 |
| 59 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 5.76E-03 |
| 60 | GO:0045490: pectin catabolic process | 6.35E-03 |
| 61 | GO:0048443: stamen development | 6.48E-03 |
| 62 | GO:0009739: response to gibberellin | 7.11E-03 |
| 63 | GO:0010087: phloem or xylem histogenesis | 7.24E-03 |
| 64 | GO:0010305: leaf vascular tissue pattern formation | 7.62E-03 |
| 65 | GO:0042752: regulation of circadian rhythm | 8.02E-03 |
| 66 | GO:0048825: cotyledon development | 8.42E-03 |
| 67 | GO:0000302: response to reactive oxygen species | 8.83E-03 |
| 68 | GO:0016032: viral process | 9.24E-03 |
| 69 | GO:0030163: protein catabolic process | 9.67E-03 |
| 70 | GO:0009639: response to red or far red light | 1.01E-02 |
| 71 | GO:0010027: thylakoid membrane organization | 1.14E-02 |
| 72 | GO:0009627: systemic acquired resistance | 1.24E-02 |
| 73 | GO:0010411: xyloglucan metabolic process | 1.28E-02 |
| 74 | GO:0010311: lateral root formation | 1.43E-02 |
| 75 | GO:0010218: response to far red light | 1.48E-02 |
| 76 | GO:0048527: lateral root development | 1.53E-02 |
| 77 | GO:0071555: cell wall organization | 1.58E-02 |
| 78 | GO:0006865: amino acid transport | 1.58E-02 |
| 79 | GO:0006869: lipid transport | 1.61E-02 |
| 80 | GO:0009637: response to blue light | 1.63E-02 |
| 81 | GO:0034599: cellular response to oxidative stress | 1.68E-02 |
| 82 | GO:0016042: lipid catabolic process | 1.76E-02 |
| 83 | GO:0030001: metal ion transport | 1.79E-02 |
| 84 | GO:0009640: photomorphogenesis | 1.95E-02 |
| 85 | GO:0010114: response to red light | 1.95E-02 |
| 86 | GO:0008152: metabolic process | 1.99E-02 |
| 87 | GO:0031347: regulation of defense response | 2.24E-02 |
| 88 | GO:0009734: auxin-activated signaling pathway | 2.55E-02 |
| 89 | GO:0048367: shoot system development | 2.78E-02 |
| 90 | GO:0009740: gibberellic acid mediated signaling pathway | 2.97E-02 |
| 91 | GO:0009416: response to light stimulus | 3.21E-02 |
| 92 | GO:0009845: seed germination | 3.85E-02 |
| 93 | GO:0042744: hydrogen peroxide catabolic process | 3.99E-02 |
| 94 | GO:0055085: transmembrane transport | 4.06E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 2 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 3 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 4 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 5 | GO:0016851: magnesium chelatase activity | 3.77E-06 |
| 6 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.83E-05 |
| 7 | GO:0004853: uroporphyrinogen decarboxylase activity | 8.78E-05 |
| 8 | GO:0003839: gamma-glutamylcyclotransferase activity | 2.08E-04 |
| 9 | GO:0005528: FK506 binding | 2.70E-04 |
| 10 | GO:0090729: toxin activity | 3.48E-04 |
| 11 | GO:0030570: pectate lyase activity | 3.93E-04 |
| 12 | GO:0043023: ribosomal large subunit binding | 5.01E-04 |
| 13 | GO:0016829: lyase activity | 6.27E-04 |
| 14 | GO:0009044: xylan 1,4-beta-xylosidase activity | 6.66E-04 |
| 15 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 6.66E-04 |
| 16 | GO:0046556: alpha-L-arabinofuranosidase activity | 6.66E-04 |
| 17 | GO:0010011: auxin binding | 6.66E-04 |
| 18 | GO:0010328: auxin influx transmembrane transporter activity | 6.66E-04 |
| 19 | GO:0016791: phosphatase activity | 7.93E-04 |
| 20 | GO:0015250: water channel activity | 9.37E-04 |
| 21 | GO:0004130: cytochrome-c peroxidase activity | 1.03E-03 |
| 22 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.03E-03 |
| 23 | GO:0016832: aldehyde-lyase activity | 1.23E-03 |
| 24 | GO:0016788: hydrolase activity, acting on ester bonds | 1.49E-03 |
| 25 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.26E-03 |
| 26 | GO:0008794: arsenate reductase (glutaredoxin) activity | 2.93E-03 |
| 27 | GO:0004650: polygalacturonase activity | 3.37E-03 |
| 28 | GO:0010329: auxin efflux transmembrane transporter activity | 3.50E-03 |
| 29 | GO:0031072: heat shock protein binding | 3.50E-03 |
| 30 | GO:0003774: motor activity | 3.80E-03 |
| 31 | GO:0016746: transferase activity, transferring acyl groups | 3.80E-03 |
| 32 | GO:0008289: lipid binding | 4.73E-03 |
| 33 | GO:0003714: transcription corepressor activity | 4.74E-03 |
| 34 | GO:0004252: serine-type endopeptidase activity | 5.11E-03 |
| 35 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 5.92E-03 |
| 36 | GO:0003756: protein disulfide isomerase activity | 6.48E-03 |
| 37 | GO:0004518: nuclease activity | 9.24E-03 |
| 38 | GO:0051015: actin filament binding | 9.67E-03 |
| 39 | GO:0005200: structural constituent of cytoskeleton | 1.05E-02 |
| 40 | GO:0008236: serine-type peptidase activity | 1.33E-02 |
| 41 | GO:0052689: carboxylic ester hydrolase activity | 1.35E-02 |
| 42 | GO:0004871: signal transducer activity | 1.53E-02 |
| 43 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.53E-02 |
| 44 | GO:0046872: metal ion binding | 1.55E-02 |
| 45 | GO:0004722: protein serine/threonine phosphatase activity | 1.61E-02 |
| 46 | GO:0003993: acid phosphatase activity | 1.68E-02 |
| 47 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.74E-02 |
| 48 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.06E-02 |
| 49 | GO:0015293: symporter activity | 2.12E-02 |
| 50 | GO:0015171: amino acid transmembrane transporter activity | 2.60E-02 |
| 51 | GO:0051082: unfolded protein binding | 3.10E-02 |
| 52 | GO:0015035: protein disulfide oxidoreductase activity | 3.17E-02 |
| 53 | GO:0019843: rRNA binding | 3.64E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009534: chloroplast thylakoid | 1.52E-08 |
| 2 | GO:0009507: chloroplast | 5.78E-08 |
| 3 | GO:0009570: chloroplast stroma | 1.06E-07 |
| 4 | GO:0010007: magnesium chelatase complex | 1.58E-06 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 2.46E-06 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 4.02E-06 |
| 7 | GO:0031977: thylakoid lumen | 7.31E-06 |
| 8 | GO:0009941: chloroplast envelope | 6.12E-05 |
| 9 | GO:0005576: extracellular region | 6.36E-05 |
| 10 | GO:0009515: granal stacked thylakoid | 8.78E-05 |
| 11 | GO:0043674: columella | 8.78E-05 |
| 12 | GO:0030093: chloroplast photosystem I | 2.08E-04 |
| 13 | GO:0009579: thylakoid | 3.05E-04 |
| 14 | GO:0005618: cell wall | 7.09E-04 |
| 15 | GO:0009505: plant-type cell wall | 1.16E-03 |
| 16 | GO:0042807: central vacuole | 1.44E-03 |
| 17 | GO:0009986: cell surface | 1.44E-03 |
| 18 | GO:0009533: chloroplast stromal thylakoid | 1.44E-03 |
| 19 | GO:0045298: tubulin complex | 2.14E-03 |
| 20 | GO:0016459: myosin complex | 2.65E-03 |
| 21 | GO:0009508: plastid chromosome | 3.50E-03 |
| 22 | GO:0030095: chloroplast photosystem II | 3.80E-03 |
| 23 | GO:0015629: actin cytoskeleton | 6.12E-03 |
| 24 | GO:0016020: membrane | 7.86E-03 |
| 25 | GO:0009522: photosystem I | 8.02E-03 |
| 26 | GO:0009523: photosystem II | 8.42E-03 |
| 27 | GO:0009295: nucleoid | 1.05E-02 |
| 28 | GO:0031969: chloroplast membrane | 1.22E-02 |
| 29 | GO:0009536: plastid | 2.04E-02 |
| 30 | GO:0005856: cytoskeleton | 2.12E-02 |
| 31 | GO:0005887: integral component of plasma membrane | 2.45E-02 |
| 32 | GO:0048046: apoplast | 2.50E-02 |
| 33 | GO:0010008: endosome membrane | 2.78E-02 |
| 34 | GO:0009706: chloroplast inner membrane | 3.10E-02 |
| 35 | GO:0009705: plant-type vacuole membrane | 4.58E-02 |
| 36 | GO:0031225: anchored component of membrane | 4.97E-02 |