GO Enrichment Analysis of Co-expressed Genes with
AT4G24740
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006482: protein demethylation | 0.00E+00 |
| 2 | GO:0016192: vesicle-mediated transport | 1.55E-05 |
| 3 | GO:0010482: regulation of epidermal cell division | 2.53E-05 |
| 4 | GO:0003400: regulation of COPII vesicle coating | 2.53E-05 |
| 5 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 2.53E-05 |
| 6 | GO:0007034: vacuolar transport | 3.12E-05 |
| 7 | GO:0015031: protein transport | 4.99E-05 |
| 8 | GO:0006825: copper ion transport | 5.21E-05 |
| 9 | GO:0097054: L-glutamate biosynthetic process | 6.44E-05 |
| 10 | GO:0015824: proline transport | 6.44E-05 |
| 11 | GO:1904961: quiescent center organization | 6.44E-05 |
| 12 | GO:0009306: protein secretion | 7.88E-05 |
| 13 | GO:0072661: protein targeting to plasma membrane | 1.13E-04 |
| 14 | GO:0006537: glutamate biosynthetic process | 1.69E-04 |
| 15 | GO:0070676: intralumenal vesicle formation | 1.69E-04 |
| 16 | GO:0010107: potassium ion import | 2.30E-04 |
| 17 | GO:0019676: ammonia assimilation cycle | 2.30E-04 |
| 18 | GO:0051567: histone H3-K9 methylation | 2.30E-04 |
| 19 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 3.65E-04 |
| 20 | GO:0000209: protein polyubiquitination | 4.32E-04 |
| 21 | GO:0009612: response to mechanical stimulus | 4.36E-04 |
| 22 | GO:0000911: cytokinesis by cell plate formation | 4.36E-04 |
| 23 | GO:0070370: cellular heat acclimation | 5.11E-04 |
| 24 | GO:0022900: electron transport chain | 6.69E-04 |
| 25 | GO:0046916: cellular transition metal ion homeostasis | 7.52E-04 |
| 26 | GO:0046685: response to arsenic-containing substance | 7.52E-04 |
| 27 | GO:0009051: pentose-phosphate shunt, oxidative branch | 7.52E-04 |
| 28 | GO:0010449: root meristem growth | 8.38E-04 |
| 29 | GO:0048765: root hair cell differentiation | 1.01E-03 |
| 30 | GO:0006006: glucose metabolic process | 1.20E-03 |
| 31 | GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 1.20E-03 |
| 32 | GO:0009266: response to temperature stimulus | 1.30E-03 |
| 33 | GO:0034605: cellular response to heat | 1.30E-03 |
| 34 | GO:0046688: response to copper ion | 1.40E-03 |
| 35 | GO:0006470: protein dephosphorylation | 1.48E-03 |
| 36 | GO:0010026: trichome differentiation | 1.72E-03 |
| 37 | GO:0006730: one-carbon metabolic process | 1.95E-03 |
| 38 | GO:0006970: response to osmotic stress | 2.14E-03 |
| 39 | GO:0019722: calcium-mediated signaling | 2.18E-03 |
| 40 | GO:0010118: stomatal movement | 2.42E-03 |
| 41 | GO:0061025: membrane fusion | 2.68E-03 |
| 42 | GO:0006904: vesicle docking involved in exocytosis | 3.48E-03 |
| 43 | GO:0000910: cytokinesis | 3.63E-03 |
| 44 | GO:0009816: defense response to bacterium, incompatible interaction | 3.91E-03 |
| 45 | GO:0006906: vesicle fusion | 4.06E-03 |
| 46 | GO:0006888: ER to Golgi vesicle-mediated transport | 4.21E-03 |
| 47 | GO:0048767: root hair elongation | 4.67E-03 |
| 48 | GO:0006865: amino acid transport | 5.15E-03 |
| 49 | GO:0009737: response to abscisic acid | 5.24E-03 |
| 50 | GO:0030001: metal ion transport | 5.81E-03 |
| 51 | GO:0006887: exocytosis | 5.98E-03 |
| 52 | GO:0009738: abscisic acid-activated signaling pathway | 6.16E-03 |
| 53 | GO:0051707: response to other organism | 6.32E-03 |
| 54 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 7.22E-03 |
| 55 | GO:0009651: response to salt stress | 9.33E-03 |
| 56 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.58E-02 |
| 57 | GO:0009617: response to bacterium | 1.66E-02 |
| 58 | GO:0009409: response to cold | 1.75E-02 |
| 59 | GO:0009860: pollen tube growth | 2.10E-02 |
| 60 | GO:0007049: cell cycle | 2.16E-02 |
| 61 | GO:0045454: cell redox homeostasis | 2.64E-02 |
| 62 | GO:0048364: root development | 3.16E-02 |
| 63 | GO:0051301: cell division | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015930: glutamate synthase activity | 0.00E+00 |
| 2 | GO:0051723: protein methylesterase activity | 0.00E+00 |
| 3 | GO:0005090: Sar guanyl-nucleotide exchange factor activity | 2.53E-05 |
| 4 | GO:0016041: glutamate synthase (ferredoxin) activity | 2.53E-05 |
| 5 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 6.44E-05 |
| 6 | GO:0015193: L-proline transmembrane transporter activity | 1.13E-04 |
| 7 | GO:0016531: copper chaperone activity | 1.13E-04 |
| 8 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 2.30E-04 |
| 9 | GO:0051538: 3 iron, 4 sulfur cluster binding | 2.95E-04 |
| 10 | GO:0005484: SNAP receptor activity | 4.15E-04 |
| 11 | GO:0019900: kinase binding | 4.36E-04 |
| 12 | GO:0051020: GTPase binding | 4.36E-04 |
| 13 | GO:0051920: peroxiredoxin activity | 4.36E-04 |
| 14 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 5.11E-04 |
| 15 | GO:0016209: antioxidant activity | 5.89E-04 |
| 16 | GO:0046914: transition metal ion binding | 6.69E-04 |
| 17 | GO:0047617: acyl-CoA hydrolase activity | 8.38E-04 |
| 18 | GO:0031624: ubiquitin conjugating enzyme binding | 1.30E-03 |
| 19 | GO:0051087: chaperone binding | 1.72E-03 |
| 20 | GO:0061630: ubiquitin protein ligase activity | 2.58E-03 |
| 21 | GO:0004722: protein serine/threonine phosphatase activity | 3.21E-03 |
| 22 | GO:0005096: GTPase activator activity | 4.67E-03 |
| 23 | GO:0000149: SNARE binding | 5.64E-03 |
| 24 | GO:0050661: NADP binding | 5.81E-03 |
| 25 | GO:0046872: metal ion binding | 7.49E-03 |
| 26 | GO:0015171: amino acid transmembrane transporter activity | 8.35E-03 |
| 27 | GO:0031625: ubiquitin protein ligase binding | 8.35E-03 |
| 28 | GO:0008565: protein transporter activity | 1.32E-02 |
| 29 | GO:0004842: ubiquitin-protein transferase activity | 1.79E-02 |
| 30 | GO:0004672: protein kinase activity | 1.90E-02 |
| 31 | GO:0004601: peroxidase activity | 1.99E-02 |
| 32 | GO:0016788: hydrolase activity, acting on ester bonds | 2.02E-02 |
| 33 | GO:0043531: ADP binding | 2.13E-02 |
| 34 | GO:0005515: protein binding | 2.51E-02 |
| 35 | GO:0003924: GTPase activity | 3.07E-02 |
| 36 | GO:0000166: nucleotide binding | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031901: early endosome membrane | 1.06E-05 |
| 2 | GO:0005886: plasma membrane | 1.05E-04 |
| 3 | GO:0030139: endocytic vesicle | 1.13E-04 |
| 4 | GO:0009504: cell plate | 1.20E-04 |
| 5 | GO:0032585: multivesicular body membrane | 1.69E-04 |
| 6 | GO:0005771: multivesicular body | 3.65E-04 |
| 7 | GO:0000815: ESCRT III complex | 4.36E-04 |
| 8 | GO:0005750: mitochondrial respiratory chain complex III | 1.30E-03 |
| 9 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.40E-03 |
| 10 | GO:0005769: early endosome | 1.50E-03 |
| 11 | GO:0005758: mitochondrial intermembrane space | 1.61E-03 |
| 12 | GO:0005770: late endosome | 2.55E-03 |
| 13 | GO:0019898: extrinsic component of membrane | 2.80E-03 |
| 14 | GO:0000785: chromatin | 3.07E-03 |
| 15 | GO:0000151: ubiquitin ligase complex | 4.52E-03 |
| 16 | GO:0031201: SNARE complex | 5.98E-03 |
| 17 | GO:0090406: pollen tube | 6.32E-03 |
| 18 | GO:0005856: cytoskeleton | 6.85E-03 |
| 19 | GO:0000502: proteasome complex | 7.78E-03 |
| 20 | GO:0010008: endosome membrane | 8.93E-03 |
| 21 | GO:0005774: vacuolar membrane | 9.72E-03 |
| 22 | GO:0005768: endosome | 1.16E-02 |
| 23 | GO:0005623: cell | 1.19E-02 |
| 24 | GO:0009524: phragmoplast | 1.21E-02 |
| 25 | GO:0016020: membrane | 1.56E-02 |
| 26 | GO:0005829: cytosol | 1.88E-02 |
| 27 | GO:0005737: cytoplasm | 2.94E-02 |