Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G24560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035278: miRNA mediated inhibition of translation0.00E+00
2GO:0000188: inactivation of MAPK activity0.00E+00
3GO:0016236: macroautophagy0.00E+00
4GO:0007160: cell-matrix adhesion0.00E+00
5GO:0006888: ER to Golgi vesicle-mediated transport1.52E-05
6GO:0055047: generative cell mitosis4.04E-05
7GO:0030242: pexophagy4.04E-05
8GO:0009727: detection of ethylene stimulus1.00E-04
9GO:0046488: phosphatidylinositol metabolic process1.00E-04
10GO:0042325: regulation of phosphorylation1.00E-04
11GO:0048571: long-day photoperiodism1.00E-04
12GO:0032012: regulation of ARF protein signal transduction1.73E-04
13GO:1900140: regulation of seedling development1.73E-04
14GO:0006517: protein deglycosylation1.73E-04
15GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway1.73E-04
16GO:0006473: protein acetylation1.73E-04
17GO:0006013: mannose metabolic process1.73E-04
18GO:0080119: ER body organization2.55E-04
19GO:0048194: Golgi vesicle budding2.55E-04
20GO:0045324: late endosome to vacuole transport3.43E-04
21GO:0045723: positive regulation of fatty acid biosynthetic process3.43E-04
22GO:1990937: xylan acetylation3.43E-04
23GO:0048015: phosphatidylinositol-mediated signaling4.37E-04
24GO:0007029: endoplasmic reticulum organization4.37E-04
25GO:0010225: response to UV-C4.37E-04
26GO:0032876: negative regulation of DNA endoreduplication4.37E-04
27GO:0034052: positive regulation of plant-type hypersensitive response4.37E-04
28GO:0045491: xylan metabolic process5.37E-04
29GO:0050665: hydrogen peroxide biosynthetic process5.37E-04
30GO:0048232: male gamete generation5.37E-04
31GO:0006886: intracellular protein transport6.97E-04
32GO:0000122: negative regulation of transcription from RNA polymerase II promoter7.49E-04
33GO:0006368: transcription elongation from RNA polymerase II promoter7.49E-04
34GO:0006614: SRP-dependent cotranslational protein targeting to membrane7.49E-04
35GO:0009690: cytokinin metabolic process8.61E-04
36GO:0006605: protein targeting8.61E-04
37GO:0052543: callose deposition in cell wall8.61E-04
38GO:0006491: N-glycan processing8.61E-04
39GO:0009846: pollen germination9.12E-04
40GO:0006075: (1->3)-beta-D-glucan biosynthetic process9.77E-04
41GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay1.10E-03
42GO:0048589: developmental growth1.10E-03
43GO:0016573: histone acetylation1.22E-03
44GO:0006810: transport1.34E-03
45GO:0052544: defense response by callose deposition in cell wall1.49E-03
46GO:0010105: negative regulation of ethylene-activated signaling pathway1.63E-03
47GO:0008361: regulation of cell size1.63E-03
48GO:0002237: response to molecule of bacterial origin1.92E-03
49GO:0007030: Golgi organization2.07E-03
50GO:0042023: DNA endoreduplication2.23E-03
51GO:0006487: protein N-linked glycosylation2.39E-03
52GO:0009863: salicylic acid mediated signaling pathway2.39E-03
53GO:0016575: histone deacetylation2.55E-03
54GO:0080092: regulation of pollen tube growth2.89E-03
55GO:0001944: vasculature development3.06E-03
56GO:0009625: response to insect3.06E-03
57GO:0010091: trichome branching3.24E-03
58GO:0045492: xylan biosynthetic process3.24E-03
59GO:0009561: megagametogenesis3.24E-03
60GO:0051028: mRNA transport3.42E-03
61GO:0008360: regulation of cell shape3.80E-03
62GO:0010182: sugar mediated signaling pathway3.80E-03
63GO:0009556: microsporogenesis4.19E-03
64GO:0006623: protein targeting to vacuole4.19E-03
65GO:0016192: vesicle-mediated transport4.64E-03
66GO:0071281: cellular response to iron ion4.79E-03
67GO:0016049: cell growth6.54E-03
68GO:0010311: lateral root formation7.01E-03
69GO:0009834: plant-type secondary cell wall biogenesis7.25E-03
70GO:0010119: regulation of stomatal movement7.49E-03
71GO:0009867: jasmonic acid mediated signaling pathway7.99E-03
72GO:0000209: protein polyubiquitination9.80E-03
73GO:0009644: response to high light intensity1.01E-02
74GO:0009908: flower development1.04E-02
75GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.09E-02
76GO:0042538: hyperosmotic salinity response1.12E-02
77GO:0009555: pollen development1.16E-02
78GO:0010224: response to UV-B1.20E-02
79GO:0006417: regulation of translation1.26E-02
80GO:0006096: glycolytic process1.32E-02
81GO:0048367: shoot system development1.35E-02
82GO:0009626: plant-type hypersensitive response1.38E-02
83GO:0000398: mRNA splicing, via spliceosome1.67E-02
84GO:0042742: defense response to bacterium2.35E-02
85GO:0009739: response to gibberellin2.41E-02
86GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.41E-02
87GO:0006470: protein dephosphorylation2.45E-02
88GO:0006970: response to osmotic stress3.20E-02
89GO:0009723: response to ethylene3.37E-02
90GO:0046777: protein autophosphorylation3.71E-02
91GO:0045892: negative regulation of transcription, DNA-templated4.07E-02
92GO:0006869: lipid transport4.30E-02
93GO:0009751: response to salicylic acid4.62E-02
94GO:0009408: response to heat4.67E-02
95GO:0006397: mRNA processing4.81E-02
96GO:0048364: root development4.81E-02
97GO:0009737: response to abscisic acid4.97E-02
RankGO TermAdjusted P value
1GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity0.00E+00
2GO:0005548: phospholipid transporter activity0.00E+00
3GO:0004572: mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity0.00E+00
4GO:0038199: ethylene receptor activity1.00E-04
5GO:0005047: signal recognition particle binding1.73E-04
6GO:0051740: ethylene binding2.55E-04
7GO:0005086: ARF guanyl-nucleotide exchange factor activity3.43E-04
8GO:0001106: RNA polymerase II transcription corepressor activity3.43E-04
9GO:0042578: phosphoric ester hydrolase activity5.37E-04
10GO:0004559: alpha-mannosidase activity6.40E-04
11GO:0004012: phospholipid-translocating ATPase activity6.40E-04
12GO:0005085: guanyl-nucleotide exchange factor activity7.49E-04
13GO:0005215: transporter activity8.82E-04
14GO:0003843: 1,3-beta-D-glucan synthase activity9.77E-04
15GO:0031490: chromatin DNA binding1.22E-03
16GO:0030955: potassium ion binding1.22E-03
17GO:0004743: pyruvate kinase activity1.22E-03
18GO:0008270: zinc ion binding1.28E-03
19GO:0004673: protein histidine kinase activity1.35E-03
20GO:0003729: mRNA binding1.37E-03
21GO:0000155: phosphorelay sensor kinase activity1.77E-03
22GO:0019888: protein phosphatase regulator activity1.77E-03
23GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.77E-03
24GO:0003712: transcription cofactor activity2.07E-03
25GO:0004725: protein tyrosine phosphatase activity2.23E-03
26GO:0004407: histone deacetylase activity2.39E-03
27GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.94E-03
28GO:0000287: magnesium ion binding3.50E-03
29GO:0004402: histone acetyltransferase activity3.61E-03
30GO:0003713: transcription coactivator activity3.80E-03
31GO:0000156: phosphorelay response regulator activity4.79E-03
32GO:0004712: protein serine/threonine/tyrosine kinase activity8.49E-03
33GO:0035091: phosphatidylinositol binding1.01E-02
34GO:0015171: amino acid transmembrane transporter activity1.26E-02
35GO:0016740: transferase activity1.41E-02
36GO:0016874: ligase activity1.45E-02
37GO:0042802: identical protein binding2.64E-02
38GO:0004842: ubiquitin-protein transferase activity3.24E-02
39GO:0050660: flavin adenine dinucleotide binding3.37E-02
40GO:0004672: protein kinase activity3.45E-02
41GO:0061630: ubiquitin protein ligase activity3.67E-02
42GO:0003924: GTPase activity4.67E-02
43GO:0009055: electron carrier activity4.90E-02
RankGO TermAdjusted P value
1GO:0070449: elongin complex0.00E+00
2GO:0005785: signal recognition particle receptor complex0.00E+00
3GO:0008305: integrin complex0.00E+00
4GO:0071561: nucleus-vacuole junction0.00E+00
5GO:0030127: COPII vesicle coat1.31E-08
6GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane1.02E-05
7GO:0000139: Golgi membrane2.36E-05
8GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I4.04E-05
9GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II4.04E-05
10GO:0032588: trans-Golgi network membrane5.37E-04
11GO:0000118: histone deacetylase complex6.40E-04
12GO:0005786: signal recognition particle, endoplasmic reticulum targeting9.77E-04
13GO:0000148: 1,3-beta-D-glucan synthase complex9.77E-04
14GO:0005829: cytosol1.25E-03
15GO:0005789: endoplasmic reticulum membrane1.43E-03
16GO:0005794: Golgi apparatus1.91E-03
17GO:0005802: trans-Golgi network3.20E-03
18GO:0005768: endosome3.76E-03
19GO:0005770: late endosome3.80E-03
20GO:0080008: Cul4-RING E3 ubiquitin ligase complex3.91E-03
21GO:0000785: chromatin4.58E-03
22GO:0000932: P-body5.64E-03
23GO:0005643: nuclear pore6.77E-03
24GO:0005681: spliceosomal complex1.32E-02
25GO:0010008: endosome membrane1.35E-02
26GO:0005783: endoplasmic reticulum1.43E-02
27GO:0005774: vacuolar membrane2.08E-02
28GO:0005634: nucleus2.27E-02
Gene type



Gene DE type