GO Enrichment Analysis of Co-expressed Genes with
AT4G24510
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 2 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 3 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 4 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 5 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 6 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 7 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 8 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 9 | GO:0006085: acetyl-CoA biosynthetic process | 1.44E-05 |
| 10 | GO:0042335: cuticle development | 4.88E-05 |
| 11 | GO:0009658: chloroplast organization | 5.87E-05 |
| 12 | GO:0043971: histone H3-K18 acetylation | 1.31E-04 |
| 13 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.31E-04 |
| 14 | GO:1904964: positive regulation of phytol biosynthetic process | 1.31E-04 |
| 15 | GO:0042371: vitamin K biosynthetic process | 1.31E-04 |
| 16 | GO:0006816: calcium ion transport | 2.24E-04 |
| 17 | GO:0006650: glycerophospholipid metabolic process | 3.03E-04 |
| 18 | GO:0010270: photosystem II oxygen evolving complex assembly | 3.03E-04 |
| 19 | GO:0006695: cholesterol biosynthetic process | 3.03E-04 |
| 20 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.03E-04 |
| 21 | GO:0010020: chloroplast fission | 3.34E-04 |
| 22 | GO:0010581: regulation of starch biosynthetic process | 4.99E-04 |
| 23 | GO:0070828: heterochromatin organization | 4.99E-04 |
| 24 | GO:0006165: nucleoside diphosphate phosphorylation | 7.14E-04 |
| 25 | GO:0006228: UTP biosynthetic process | 7.14E-04 |
| 26 | GO:0010088: phloem development | 7.14E-04 |
| 27 | GO:0009855: determination of bilateral symmetry | 7.14E-04 |
| 28 | GO:0006424: glutamyl-tRNA aminoacylation | 7.14E-04 |
| 29 | GO:0043572: plastid fission | 7.14E-04 |
| 30 | GO:2001141: regulation of RNA biosynthetic process | 7.14E-04 |
| 31 | GO:0007231: osmosensory signaling pathway | 7.14E-04 |
| 32 | GO:0009152: purine ribonucleotide biosynthetic process | 7.14E-04 |
| 33 | GO:0046653: tetrahydrofolate metabolic process | 7.14E-04 |
| 34 | GO:0006241: CTP biosynthetic process | 7.14E-04 |
| 35 | GO:0000413: protein peptidyl-prolyl isomerization | 8.42E-04 |
| 36 | GO:0033500: carbohydrate homeostasis | 9.47E-04 |
| 37 | GO:0042991: transcription factor import into nucleus | 9.47E-04 |
| 38 | GO:0006183: GTP biosynthetic process | 9.47E-04 |
| 39 | GO:0032543: mitochondrial translation | 1.20E-03 |
| 40 | GO:0006828: manganese ion transport | 1.47E-03 |
| 41 | GO:0010190: cytochrome b6f complex assembly | 1.47E-03 |
| 42 | GO:0006014: D-ribose metabolic process | 1.47E-03 |
| 43 | GO:0042549: photosystem II stabilization | 1.47E-03 |
| 44 | GO:0006555: methionine metabolic process | 1.47E-03 |
| 45 | GO:0010358: leaf shaping | 1.47E-03 |
| 46 | GO:0010014: meristem initiation | 1.76E-03 |
| 47 | GO:0042372: phylloquinone biosynthetic process | 1.76E-03 |
| 48 | GO:0048280: vesicle fusion with Golgi apparatus | 1.76E-03 |
| 49 | GO:0009955: adaxial/abaxial pattern specification | 1.76E-03 |
| 50 | GO:0080060: integument development | 1.76E-03 |
| 51 | GO:0008272: sulfate transport | 2.06E-03 |
| 52 | GO:0009690: cytokinin metabolic process | 2.39E-03 |
| 53 | GO:0007155: cell adhesion | 2.39E-03 |
| 54 | GO:0016051: carbohydrate biosynthetic process | 2.59E-03 |
| 55 | GO:0009657: plastid organization | 2.73E-03 |
| 56 | GO:0019430: removal of superoxide radicals | 2.73E-03 |
| 57 | GO:0032544: plastid translation | 2.73E-03 |
| 58 | GO:0044030: regulation of DNA methylation | 2.73E-03 |
| 59 | GO:0009932: cell tip growth | 2.73E-03 |
| 60 | GO:0071482: cellular response to light stimulus | 2.73E-03 |
| 61 | GO:0006631: fatty acid metabolic process | 3.07E-03 |
| 62 | GO:0033384: geranyl diphosphate biosynthetic process | 3.08E-03 |
| 63 | GO:0000902: cell morphogenesis | 3.08E-03 |
| 64 | GO:0045337: farnesyl diphosphate biosynthetic process | 3.08E-03 |
| 65 | GO:0010380: regulation of chlorophyll biosynthetic process | 3.46E-03 |
| 66 | GO:0035999: tetrahydrofolate interconversion | 3.46E-03 |
| 67 | GO:0006535: cysteine biosynthetic process from serine | 3.84E-03 |
| 68 | GO:0048829: root cap development | 3.84E-03 |
| 69 | GO:0006896: Golgi to vacuole transport | 3.84E-03 |
| 70 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.97E-03 |
| 71 | GO:0010072: primary shoot apical meristem specification | 4.24E-03 |
| 72 | GO:0006415: translational termination | 4.24E-03 |
| 73 | GO:0043085: positive regulation of catalytic activity | 4.24E-03 |
| 74 | GO:0006352: DNA-templated transcription, initiation | 4.24E-03 |
| 75 | GO:0000038: very long-chain fatty acid metabolic process | 4.24E-03 |
| 76 | GO:0009773: photosynthetic electron transport in photosystem I | 4.24E-03 |
| 77 | GO:0015979: photosynthesis | 4.50E-03 |
| 78 | GO:0045454: cell redox homeostasis | 4.78E-03 |
| 79 | GO:0010207: photosystem II assembly | 5.52E-03 |
| 80 | GO:0070588: calcium ion transmembrane transport | 5.97E-03 |
| 81 | GO:0080188: RNA-directed DNA methylation | 5.97E-03 |
| 82 | GO:0000027: ribosomal large subunit assembly | 6.91E-03 |
| 83 | GO:0007010: cytoskeleton organization | 6.91E-03 |
| 84 | GO:0009944: polarity specification of adaxial/abaxial axis | 6.91E-03 |
| 85 | GO:0019344: cysteine biosynthetic process | 6.91E-03 |
| 86 | GO:0007017: microtubule-based process | 7.40E-03 |
| 87 | GO:0006418: tRNA aminoacylation for protein translation | 7.40E-03 |
| 88 | GO:0003333: amino acid transmembrane transport | 7.91E-03 |
| 89 | GO:0006730: one-carbon metabolic process | 8.42E-03 |
| 90 | GO:0030245: cellulose catabolic process | 8.42E-03 |
| 91 | GO:0009411: response to UV | 8.95E-03 |
| 92 | GO:0019722: calcium-mediated signaling | 9.49E-03 |
| 93 | GO:0016117: carotenoid biosynthetic process | 1.00E-02 |
| 94 | GO:0006633: fatty acid biosynthetic process | 1.00E-02 |
| 95 | GO:0042147: retrograde transport, endosome to Golgi | 1.00E-02 |
| 96 | GO:0000271: polysaccharide biosynthetic process | 1.06E-02 |
| 97 | GO:0010118: stomatal movement | 1.06E-02 |
| 98 | GO:0048868: pollen tube development | 1.12E-02 |
| 99 | GO:0006342: chromatin silencing | 1.12E-02 |
| 100 | GO:0009741: response to brassinosteroid | 1.12E-02 |
| 101 | GO:0010268: brassinosteroid homeostasis | 1.12E-02 |
| 102 | GO:0045489: pectin biosynthetic process | 1.12E-02 |
| 103 | GO:0007018: microtubule-based movement | 1.18E-02 |
| 104 | GO:0048825: cotyledon development | 1.24E-02 |
| 105 | GO:0019252: starch biosynthetic process | 1.24E-02 |
| 106 | GO:0008654: phospholipid biosynthetic process | 1.24E-02 |
| 107 | GO:0006623: protein targeting to vacuole | 1.24E-02 |
| 108 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.30E-02 |
| 109 | GO:0016132: brassinosteroid biosynthetic process | 1.30E-02 |
| 110 | GO:0010583: response to cyclopentenone | 1.36E-02 |
| 111 | GO:0032502: developmental process | 1.36E-02 |
| 112 | GO:0016125: sterol metabolic process | 1.49E-02 |
| 113 | GO:0007267: cell-cell signaling | 1.55E-02 |
| 114 | GO:0010027: thylakoid membrane organization | 1.68E-02 |
| 115 | GO:0006457: protein folding | 1.79E-02 |
| 116 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.89E-02 |
| 117 | GO:0048481: plant ovule development | 2.03E-02 |
| 118 | GO:0018298: protein-chromophore linkage | 2.03E-02 |
| 119 | GO:0009813: flavonoid biosynthetic process | 2.11E-02 |
| 120 | GO:0006865: amino acid transport | 2.33E-02 |
| 121 | GO:0009867: jasmonic acid mediated signaling pathway | 2.41E-02 |
| 122 | GO:0009637: response to blue light | 2.41E-02 |
| 123 | GO:0009853: photorespiration | 2.41E-02 |
| 124 | GO:0006839: mitochondrial transport | 2.64E-02 |
| 125 | GO:0006869: lipid transport | 2.78E-02 |
| 126 | GO:0042542: response to hydrogen peroxide | 2.80E-02 |
| 127 | GO:0010114: response to red light | 2.88E-02 |
| 128 | GO:0016042: lipid catabolic process | 3.04E-02 |
| 129 | GO:0006629: lipid metabolic process | 3.12E-02 |
| 130 | GO:0071555: cell wall organization | 3.14E-02 |
| 131 | GO:0009753: response to jasmonic acid | 3.35E-02 |
| 132 | GO:0042538: hyperosmotic salinity response | 3.39E-02 |
| 133 | GO:0008152: metabolic process | 3.44E-02 |
| 134 | GO:0009585: red, far-red light phototransduction | 3.56E-02 |
| 135 | GO:0009736: cytokinin-activated signaling pathway | 3.56E-02 |
| 136 | GO:0006508: proteolysis | 4.37E-02 |
| 137 | GO:0009734: auxin-activated signaling pathway | 4.39E-02 |
| 138 | GO:0042545: cell wall modification | 4.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 2 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 3 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 4 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 5 | GO:0003878: ATP citrate synthase activity | 7.65E-06 |
| 6 | GO:0051920: peroxiredoxin activity | 4.98E-05 |
| 7 | GO:0016209: antioxidant activity | 8.68E-05 |
| 8 | GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity | 1.31E-04 |
| 9 | GO:0010012: steroid 22-alpha hydroxylase activity | 1.31E-04 |
| 10 | GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | 1.31E-04 |
| 11 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.31E-04 |
| 12 | GO:0050017: L-3-cyanoalanine synthase activity | 3.03E-04 |
| 13 | GO:0008509: anion transmembrane transporter activity | 3.03E-04 |
| 14 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 3.03E-04 |
| 15 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.54E-04 |
| 16 | GO:0002161: aminoacyl-tRNA editing activity | 4.99E-04 |
| 17 | GO:0005504: fatty acid binding | 4.99E-04 |
| 18 | GO:0030267: glyoxylate reductase (NADP) activity | 4.99E-04 |
| 19 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 4.99E-04 |
| 20 | GO:0008864: formyltetrahydrofolate deformylase activity | 4.99E-04 |
| 21 | GO:0070330: aromatase activity | 4.99E-04 |
| 22 | GO:0016149: translation release factor activity, codon specific | 7.14E-04 |
| 23 | GO:0004550: nucleoside diphosphate kinase activity | 7.14E-04 |
| 24 | GO:0043495: protein anchor | 9.47E-04 |
| 25 | GO:0045430: chalcone isomerase activity | 9.47E-04 |
| 26 | GO:0001053: plastid sigma factor activity | 9.47E-04 |
| 27 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 9.47E-04 |
| 28 | GO:0016987: sigma factor activity | 9.47E-04 |
| 29 | GO:0010328: auxin influx transmembrane transporter activity | 9.47E-04 |
| 30 | GO:0010385: double-stranded methylated DNA binding | 9.47E-04 |
| 31 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.20E-03 |
| 32 | GO:0018685: alkane 1-monooxygenase activity | 1.20E-03 |
| 33 | GO:0008374: O-acyltransferase activity | 1.20E-03 |
| 34 | GO:0009922: fatty acid elongase activity | 1.20E-03 |
| 35 | GO:0016208: AMP binding | 1.47E-03 |
| 36 | GO:0004747: ribokinase activity | 1.76E-03 |
| 37 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.76E-03 |
| 38 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.76E-03 |
| 39 | GO:0004124: cysteine synthase activity | 1.76E-03 |
| 40 | GO:0015140: malate transmembrane transporter activity | 2.06E-03 |
| 41 | GO:0019899: enzyme binding | 2.06E-03 |
| 42 | GO:0042802: identical protein binding | 2.26E-03 |
| 43 | GO:0008865: fructokinase activity | 2.39E-03 |
| 44 | GO:0016788: hydrolase activity, acting on ester bonds | 2.97E-03 |
| 45 | GO:0003747: translation release factor activity | 3.08E-03 |
| 46 | GO:0004337: geranyltranstransferase activity | 3.08E-03 |
| 47 | GO:0005384: manganese ion transmembrane transporter activity | 3.46E-03 |
| 48 | GO:0043621: protein self-association | 3.59E-03 |
| 49 | GO:0008047: enzyme activator activity | 3.84E-03 |
| 50 | GO:0004161: dimethylallyltranstransferase activity | 4.24E-03 |
| 51 | GO:0052689: carboxylic ester hydrolase activity | 4.32E-03 |
| 52 | GO:0005524: ATP binding | 4.56E-03 |
| 53 | GO:0000049: tRNA binding | 4.65E-03 |
| 54 | GO:0015095: magnesium ion transmembrane transporter activity | 5.08E-03 |
| 55 | GO:0031072: heat shock protein binding | 5.08E-03 |
| 56 | GO:0005262: calcium channel activity | 5.08E-03 |
| 57 | GO:0003924: GTPase activity | 6.24E-03 |
| 58 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 6.43E-03 |
| 59 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 6.43E-03 |
| 60 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 6.43E-03 |
| 61 | GO:0009055: electron carrier activity | 6.82E-03 |
| 62 | GO:0004857: enzyme inhibitor activity | 6.91E-03 |
| 63 | GO:0004176: ATP-dependent peptidase activity | 7.91E-03 |
| 64 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 7.91E-03 |
| 65 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 8.42E-03 |
| 66 | GO:0008810: cellulase activity | 8.95E-03 |
| 67 | GO:0022891: substrate-specific transmembrane transporter activity | 8.95E-03 |
| 68 | GO:0016301: kinase activity | 9.20E-03 |
| 69 | GO:0003756: protein disulfide isomerase activity | 9.49E-03 |
| 70 | GO:0008289: lipid binding | 9.50E-03 |
| 71 | GO:0004812: aminoacyl-tRNA ligase activity | 1.00E-02 |
| 72 | GO:0004402: histone acetyltransferase activity | 1.06E-02 |
| 73 | GO:0008017: microtubule binding | 1.15E-02 |
| 74 | GO:0004791: thioredoxin-disulfide reductase activity | 1.18E-02 |
| 75 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.42E-02 |
| 76 | GO:0008237: metallopeptidase activity | 1.55E-02 |
| 77 | GO:0005200: structural constituent of cytoskeleton | 1.55E-02 |
| 78 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.55E-02 |
| 79 | GO:0004601: peroxidase activity | 1.71E-02 |
| 80 | GO:0016168: chlorophyll binding | 1.75E-02 |
| 81 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.96E-02 |
| 82 | GO:0008236: serine-type peptidase activity | 1.96E-02 |
| 83 | GO:0005507: copper ion binding | 2.02E-02 |
| 84 | GO:0004222: metalloendopeptidase activity | 2.18E-02 |
| 85 | GO:0005525: GTP binding | 2.43E-02 |
| 86 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 2.48E-02 |
| 87 | GO:0000149: SNARE binding | 2.56E-02 |
| 88 | GO:0042393: histone binding | 2.64E-02 |
| 89 | GO:0004871: signal transducer activity | 2.66E-02 |
| 90 | GO:0005484: SNAP receptor activity | 2.88E-02 |
| 91 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.05E-02 |
| 92 | GO:0005198: structural molecule activity | 3.13E-02 |
| 93 | GO:0015293: symporter activity | 3.13E-02 |
| 94 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.56E-02 |
| 95 | GO:0015171: amino acid transmembrane transporter activity | 3.83E-02 |
| 96 | GO:0045330: aspartyl esterase activity | 3.83E-02 |
| 97 | GO:0003777: microtubule motor activity | 3.83E-02 |
| 98 | GO:0030599: pectinesterase activity | 4.39E-02 |
| 99 | GO:0051082: unfolded protein binding | 4.58E-02 |
| 100 | GO:0016746: transferase activity, transferring acyl groups | 4.67E-02 |
| 101 | GO:0016887: ATPase activity | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031224: intrinsic component of membrane | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 3.96E-08 |
| 3 | GO:0009570: chloroplast stroma | 3.82E-07 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 4.95E-06 |
| 5 | GO:0009346: citrate lyase complex | 7.65E-06 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 9.88E-06 |
| 7 | GO:0009941: chloroplast envelope | 1.80E-05 |
| 8 | GO:0031977: thylakoid lumen | 2.25E-05 |
| 9 | GO:0046658: anchored component of plasma membrane | 4.14E-05 |
| 10 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.31E-04 |
| 11 | GO:0031225: anchored component of membrane | 2.89E-04 |
| 12 | GO:0000792: heterochromatin | 3.03E-04 |
| 13 | GO:0042651: thylakoid membrane | 5.12E-04 |
| 14 | GO:0005886: plasma membrane | 5.19E-04 |
| 15 | GO:0005874: microtubule | 6.30E-04 |
| 16 | GO:0009579: thylakoid | 8.23E-04 |
| 17 | GO:0009534: chloroplast thylakoid | 8.37E-04 |
| 18 | GO:0000793: condensed chromosome | 1.47E-03 |
| 19 | GO:0000794: condensed nuclear chromosome | 2.06E-03 |
| 20 | GO:0009533: chloroplast stromal thylakoid | 2.06E-03 |
| 21 | GO:0012507: ER to Golgi transport vesicle membrane | 2.39E-03 |
| 22 | GO:0009505: plant-type cell wall | 3.06E-03 |
| 23 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.08E-03 |
| 24 | GO:0045298: tubulin complex | 3.08E-03 |
| 25 | GO:0031969: chloroplast membrane | 3.81E-03 |
| 26 | GO:0009508: plastid chromosome | 5.08E-03 |
| 27 | GO:0030659: cytoplasmic vesicle membrane | 5.52E-03 |
| 28 | GO:0030095: chloroplast photosystem II | 5.52E-03 |
| 29 | GO:0005875: microtubule associated complex | 6.43E-03 |
| 30 | GO:0009654: photosystem II oxygen evolving complex | 7.40E-03 |
| 31 | GO:0009532: plastid stroma | 7.91E-03 |
| 32 | GO:0005871: kinesin complex | 1.00E-02 |
| 33 | GO:0000790: nuclear chromatin | 1.00E-02 |
| 34 | GO:0009523: photosystem II | 1.24E-02 |
| 35 | GO:0019898: extrinsic component of membrane | 1.24E-02 |
| 36 | GO:0009506: plasmodesma | 1.28E-02 |
| 37 | GO:0009295: nucleoid | 1.55E-02 |
| 38 | GO:0005778: peroxisomal membrane | 1.55E-02 |
| 39 | GO:0010319: stromule | 1.55E-02 |
| 40 | GO:0000786: nucleosome | 2.33E-02 |
| 41 | GO:0031902: late endosome membrane | 2.72E-02 |
| 42 | GO:0031201: SNARE complex | 2.72E-02 |
| 43 | GO:0009536: plastid | 4.04E-02 |
| 44 | GO:0012505: endomembrane system | 4.48E-02 |
| 45 | GO:0009706: chloroplast inner membrane | 4.58E-02 |