GO Enrichment Analysis of Co-expressed Genes with
AT4G23690
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071555: cell wall organization | 2.57E-06 |
| 2 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 9.33E-05 |
| 3 | GO:0010442: guard cell morphogenesis | 9.33E-05 |
| 4 | GO:0071370: cellular response to gibberellin stimulus | 9.33E-05 |
| 5 | GO:0006434: seryl-tRNA aminoacylation | 9.33E-05 |
| 6 | GO:0019510: S-adenosylhomocysteine catabolic process | 9.33E-05 |
| 7 | GO:0052541: plant-type cell wall cellulose metabolic process | 2.20E-04 |
| 8 | GO:0010069: zygote asymmetric cytokinesis in embryo sac | 2.20E-04 |
| 9 | GO:0044208: 'de novo' AMP biosynthetic process | 2.20E-04 |
| 10 | GO:0033353: S-adenosylmethionine cycle | 2.20E-04 |
| 11 | GO:0010424: DNA methylation on cytosine within a CG sequence | 2.20E-04 |
| 12 | GO:0043039: tRNA aminoacylation | 2.20E-04 |
| 13 | GO:0006065: UDP-glucuronate biosynthetic process | 3.67E-04 |
| 14 | GO:0090506: axillary shoot meristem initiation | 3.67E-04 |
| 15 | GO:0009294: DNA mediated transformation | 4.25E-04 |
| 16 | GO:2000122: negative regulation of stomatal complex development | 7.02E-04 |
| 17 | GO:0009694: jasmonic acid metabolic process | 7.02E-04 |
| 18 | GO:0010037: response to carbon dioxide | 7.02E-04 |
| 19 | GO:0015976: carbon utilization | 7.02E-04 |
| 20 | GO:0071554: cell wall organization or biogenesis | 7.11E-04 |
| 21 | GO:0016132: brassinosteroid biosynthetic process | 7.11E-04 |
| 22 | GO:0045490: pectin catabolic process | 9.35E-04 |
| 23 | GO:0009117: nucleotide metabolic process | 1.08E-03 |
| 24 | GO:0010411: xyloglucan metabolic process | 1.18E-03 |
| 25 | GO:0009955: adaxial/abaxial pattern specification | 1.29E-03 |
| 26 | GO:0010067: procambium histogenesis | 1.29E-03 |
| 27 | GO:1901259: chloroplast rRNA processing | 1.29E-03 |
| 28 | GO:0006694: steroid biosynthetic process | 1.29E-03 |
| 29 | GO:0048444: floral organ morphogenesis | 1.29E-03 |
| 30 | GO:0009826: unidimensional cell growth | 1.53E-03 |
| 31 | GO:0007155: cell adhesion | 1.75E-03 |
| 32 | GO:0006875: cellular metal ion homeostasis | 1.75E-03 |
| 33 | GO:0006526: arginine biosynthetic process | 2.00E-03 |
| 34 | GO:0032544: plastid translation | 2.00E-03 |
| 35 | GO:0009808: lignin metabolic process | 2.00E-03 |
| 36 | GO:0042546: cell wall biogenesis | 2.19E-03 |
| 37 | GO:0006189: 'de novo' IMP biosynthetic process | 2.25E-03 |
| 38 | GO:0048589: developmental growth | 2.25E-03 |
| 39 | GO:0006349: regulation of gene expression by genetic imprinting | 2.52E-03 |
| 40 | GO:0006949: syncytium formation | 2.80E-03 |
| 41 | GO:0006869: lipid transport | 2.97E-03 |
| 42 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.09E-03 |
| 43 | GO:0010216: maintenance of DNA methylation | 3.09E-03 |
| 44 | GO:0045037: protein import into chloroplast stroma | 3.38E-03 |
| 45 | GO:0050826: response to freezing | 3.69E-03 |
| 46 | GO:0009725: response to hormone | 3.69E-03 |
| 47 | GO:0010223: secondary shoot formation | 4.01E-03 |
| 48 | GO:0009934: regulation of meristem structural organization | 4.01E-03 |
| 49 | GO:0005985: sucrose metabolic process | 4.33E-03 |
| 50 | GO:0006071: glycerol metabolic process | 4.67E-03 |
| 51 | GO:0007010: cytoskeleton organization | 5.01E-03 |
| 52 | GO:0010026: trichome differentiation | 5.36E-03 |
| 53 | GO:0009695: jasmonic acid biosynthetic process | 5.36E-03 |
| 54 | GO:0051302: regulation of cell division | 5.36E-03 |
| 55 | GO:0048278: vesicle docking | 5.72E-03 |
| 56 | GO:0031408: oxylipin biosynthetic process | 5.72E-03 |
| 57 | GO:0016998: cell wall macromolecule catabolic process | 5.72E-03 |
| 58 | GO:0030245: cellulose catabolic process | 6.09E-03 |
| 59 | GO:0006730: one-carbon metabolic process | 6.09E-03 |
| 60 | GO:0007005: mitochondrion organization | 6.09E-03 |
| 61 | GO:0019748: secondary metabolic process | 6.09E-03 |
| 62 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 6.47E-03 |
| 63 | GO:0001944: vasculature development | 6.47E-03 |
| 64 | GO:0019722: calcium-mediated signaling | 6.85E-03 |
| 65 | GO:0010089: xylem development | 6.85E-03 |
| 66 | GO:0000271: polysaccharide biosynthetic process | 7.65E-03 |
| 67 | GO:0080022: primary root development | 7.65E-03 |
| 68 | GO:0010087: phloem or xylem histogenesis | 7.65E-03 |
| 69 | GO:0045489: pectin biosynthetic process | 8.06E-03 |
| 70 | GO:0006520: cellular amino acid metabolic process | 8.06E-03 |
| 71 | GO:0009617: response to bacterium | 8.21E-03 |
| 72 | GO:0061025: membrane fusion | 8.47E-03 |
| 73 | GO:0007264: small GTPase mediated signal transduction | 9.78E-03 |
| 74 | GO:0010583: response to cyclopentenone | 9.78E-03 |
| 75 | GO:0009828: plant-type cell wall loosening | 1.07E-02 |
| 76 | GO:0007267: cell-cell signaling | 1.11E-02 |
| 77 | GO:0016126: sterol biosynthetic process | 1.21E-02 |
| 78 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.26E-02 |
| 79 | GO:0006906: vesicle fusion | 1.31E-02 |
| 80 | GO:0009817: defense response to fungus, incompatible interaction | 1.46E-02 |
| 81 | GO:0048481: plant ovule development | 1.46E-02 |
| 82 | GO:0015979: photosynthesis | 1.51E-02 |
| 83 | GO:0048767: root hair elongation | 1.51E-02 |
| 84 | GO:0009834: plant-type secondary cell wall biogenesis | 1.56E-02 |
| 85 | GO:0045454: cell redox homeostasis | 1.59E-02 |
| 86 | GO:0010119: regulation of stomatal movement | 1.62E-02 |
| 87 | GO:0009910: negative regulation of flower development | 1.62E-02 |
| 88 | GO:0009867: jasmonic acid mediated signaling pathway | 1.73E-02 |
| 89 | GO:0016051: carbohydrate biosynthetic process | 1.73E-02 |
| 90 | GO:0042742: defense response to bacterium | 1.75E-02 |
| 91 | GO:0006839: mitochondrial transport | 1.89E-02 |
| 92 | GO:0006887: exocytosis | 1.95E-02 |
| 93 | GO:0042542: response to hydrogen peroxide | 2.01E-02 |
| 94 | GO:0009744: response to sucrose | 2.07E-02 |
| 95 | GO:0051707: response to other organism | 2.07E-02 |
| 96 | GO:0008152: metabolic process | 2.16E-02 |
| 97 | GO:0009644: response to high light intensity | 2.18E-02 |
| 98 | GO:0009664: plant-type cell wall organization | 2.43E-02 |
| 99 | GO:0009409: response to cold | 2.55E-02 |
| 100 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.62E-02 |
| 101 | GO:0048367: shoot system development | 2.94E-02 |
| 102 | GO:0016569: covalent chromatin modification | 3.15E-02 |
| 103 | GO:0042545: cell wall modification | 3.21E-02 |
| 104 | GO:0009742: brassinosteroid mediated signaling pathway | 3.42E-02 |
| 105 | GO:0051301: cell division | 3.78E-02 |
| 106 | GO:0055085: transmembrane transport | 4.39E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030795: jasmonate O-methyltransferase activity | 0.00E+00 |
| 2 | GO:0102078: methyl jasmonate methylesterase activity | 0.00E+00 |
| 3 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
| 4 | GO:0051920: peroxiredoxin activity | 2.87E-05 |
| 5 | GO:0016209: antioxidant activity | 5.09E-05 |
| 6 | GO:0070626: (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity | 9.33E-05 |
| 7 | GO:0004560: alpha-L-fucosidase activity | 9.33E-05 |
| 8 | GO:0004013: adenosylhomocysteinase activity | 9.33E-05 |
| 9 | GO:0004828: serine-tRNA ligase activity | 9.33E-05 |
| 10 | GO:0015088: copper uptake transmembrane transporter activity | 9.33E-05 |
| 11 | GO:0044715: 8-oxo-dGDP phosphatase activity | 9.33E-05 |
| 12 | GO:0004018: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity | 9.33E-05 |
| 13 | GO:0000248: C-5 sterol desaturase activity | 9.33E-05 |
| 14 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 9.33E-05 |
| 15 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 9.33E-05 |
| 16 | GO:0051287: NAD binding | 2.59E-04 |
| 17 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 3.67E-04 |
| 18 | GO:0003979: UDP-glucose 6-dehydrogenase activity | 3.67E-04 |
| 19 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.24E-04 |
| 20 | GO:0030570: pectate lyase activity | 4.25E-04 |
| 21 | GO:0035529: NADH pyrophosphatase activity | 5.28E-04 |
| 22 | GO:0052793: pectin acetylesterase activity | 7.02E-04 |
| 23 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 7.11E-04 |
| 24 | GO:0016413: O-acetyltransferase activity | 9.57E-04 |
| 25 | GO:0008200: ion channel inhibitor activity | 1.08E-03 |
| 26 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.18E-03 |
| 27 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 1.29E-03 |
| 28 | GO:0051753: mannan synthase activity | 1.29E-03 |
| 29 | GO:0004564: beta-fructofuranosidase activity | 1.75E-03 |
| 30 | GO:0004185: serine-type carboxypeptidase activity | 2.10E-03 |
| 31 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 2.25E-03 |
| 32 | GO:0052689: carboxylic ester hydrolase activity | 2.39E-03 |
| 33 | GO:0004575: sucrose alpha-glucosidase activity | 2.52E-03 |
| 34 | GO:0005381: iron ion transmembrane transporter activity | 2.52E-03 |
| 35 | GO:0004565: beta-galactosidase activity | 3.69E-03 |
| 36 | GO:0004089: carbonate dehydratase activity | 3.69E-03 |
| 37 | GO:0030599: pectinesterase activity | 3.76E-03 |
| 38 | GO:0019843: rRNA binding | 4.99E-03 |
| 39 | GO:0008289: lipid binding | 5.23E-03 |
| 40 | GO:0033612: receptor serine/threonine kinase binding | 5.72E-03 |
| 41 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 6.09E-03 |
| 42 | GO:0008810: cellulase activity | 6.47E-03 |
| 43 | GO:0005102: receptor binding | 7.25E-03 |
| 44 | GO:0005199: structural constituent of cell wall | 8.06E-03 |
| 45 | GO:0004872: receptor activity | 8.90E-03 |
| 46 | GO:0004601: peroxidase activity | 1.07E-02 |
| 47 | GO:0016759: cellulose synthase activity | 1.07E-02 |
| 48 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.11E-02 |
| 49 | GO:0005200: structural constituent of cytoskeleton | 1.11E-02 |
| 50 | GO:0005516: calmodulin binding | 1.20E-02 |
| 51 | GO:0016787: hydrolase activity | 1.28E-02 |
| 52 | GO:0030247: polysaccharide binding | 1.36E-02 |
| 53 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.62E-02 |
| 54 | GO:0030145: manganese ion binding | 1.62E-02 |
| 55 | GO:0003746: translation elongation factor activity | 1.73E-02 |
| 56 | GO:0000149: SNARE binding | 1.84E-02 |
| 57 | GO:0005484: SNAP receptor activity | 2.07E-02 |
| 58 | GO:0016757: transferase activity, transferring glycosyl groups | 2.55E-02 |
| 59 | GO:0045330: aspartyl esterase activity | 2.75E-02 |
| 60 | GO:0045735: nutrient reservoir activity | 2.88E-02 |
| 61 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.94E-02 |
| 62 | GO:0004650: polygalacturonase activity | 3.08E-02 |
| 63 | GO:0022857: transmembrane transporter activity | 3.15E-02 |
| 64 | GO:0016758: transferase activity, transferring hexosyl groups | 3.78E-02 |
| 65 | GO:0016829: lyase activity | 4.07E-02 |
| 66 | GO:0005507: copper ion binding | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005576: extracellular region | 9.09E-12 |
| 2 | GO:0048046: apoplast | 3.74E-11 |
| 3 | GO:0009505: plant-type cell wall | 2.71E-09 |
| 4 | GO:0046658: anchored component of plasma membrane | 6.81E-07 |
| 5 | GO:0005618: cell wall | 8.98E-07 |
| 6 | GO:0031225: anchored component of membrane | 9.68E-07 |
| 7 | GO:0009579: thylakoid | 3.54E-04 |
| 8 | GO:0005853: eukaryotic translation elongation factor 1 complex | 3.67E-04 |
| 9 | GO:0005775: vacuolar lumen | 5.28E-04 |
| 10 | GO:0031897: Tic complex | 7.02E-04 |
| 11 | GO:0010319: stromule | 9.05E-04 |
| 12 | GO:0010168: ER body | 1.08E-03 |
| 13 | GO:0000325: plant-type vacuole | 1.50E-03 |
| 14 | GO:0000139: Golgi membrane | 1.53E-03 |
| 15 | GO:0005773: vacuole | 1.60E-03 |
| 16 | GO:0005763: mitochondrial small ribosomal subunit | 2.25E-03 |
| 17 | GO:0030095: chloroplast photosystem II | 4.01E-03 |
| 18 | GO:0009506: plasmodesma | 4.19E-03 |
| 19 | GO:0005875: microtubule associated complex | 4.67E-03 |
| 20 | GO:0009654: photosystem II oxygen evolving complex | 5.36E-03 |
| 21 | GO:0005615: extracellular space | 7.69E-03 |
| 22 | GO:0009570: chloroplast stroma | 7.93E-03 |
| 23 | GO:0005886: plasma membrane | 8.75E-03 |
| 24 | GO:0009504: cell plate | 8.90E-03 |
| 25 | GO:0019898: extrinsic component of membrane | 8.90E-03 |
| 26 | GO:0009534: chloroplast thylakoid | 9.06E-03 |
| 27 | GO:0016020: membrane | 9.96E-03 |
| 28 | GO:0009941: chloroplast envelope | 1.34E-02 |
| 29 | GO:0009535: chloroplast thylakoid membrane | 1.37E-02 |
| 30 | GO:0031201: SNARE complex | 1.95E-02 |
| 31 | GO:0031902: late endosome membrane | 1.95E-02 |
| 32 | GO:0005794: Golgi apparatus | 2.17E-02 |
| 33 | GO:0005856: cytoskeleton | 2.24E-02 |
| 34 | GO:0012505: endomembrane system | 3.21E-02 |
| 35 | GO:0009706: chloroplast inner membrane | 3.28E-02 |
| 36 | GO:0009543: chloroplast thylakoid lumen | 3.85E-02 |
| 37 | GO:0009524: phragmoplast | 4.00E-02 |
| 38 | GO:0016021: integral component of membrane | 4.10E-02 |