Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G23260

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032780: negative regulation of ATPase activity0.00E+00
2GO:0003400: regulation of COPII vesicle coating4.31E-05
3GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process4.31E-05
4GO:0050792: regulation of viral process4.31E-05
5GO:0033306: phytol metabolic process4.31E-05
6GO:0015824: proline transport1.07E-04
7GO:1904961: quiescent center organization1.07E-04
8GO:0006825: copper ion transport1.12E-04
9GO:0072661: protein targeting to plasma membrane1.84E-04
10GO:0071494: cellular response to UV-C1.84E-04
11GO:0001676: long-chain fatty acid metabolic process2.70E-04
12GO:0030163: protein catabolic process3.02E-04
13GO:0006878: cellular copper ion homeostasis3.64E-04
14GO:0006511: ubiquitin-dependent protein catabolic process4.72E-04
15GO:0018258: protein O-linked glycosylation via hydroxyproline5.67E-04
16GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly5.67E-04
17GO:0010405: arabinogalactan protein metabolic process5.67E-04
18GO:0009920: cell plate formation involved in plant-type cell wall biogenesis5.67E-04
19GO:0009612: response to mechanical stimulus6.76E-04
20GO:0006458: 'de novo' protein folding6.76E-04
21GO:0000911: cytokinesis by cell plate formation6.76E-04
22GO:0042026: protein refolding6.76E-04
23GO:0006631: fatty acid metabolic process7.37E-04
24GO:1900056: negative regulation of leaf senescence7.90E-04
25GO:0006102: isocitrate metabolic process9.08E-04
26GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline9.08E-04
27GO:0046916: cellular transition metal ion homeostasis1.16E-03
28GO:0019432: triglyceride biosynthetic process1.16E-03
29GO:0010449: root meristem growth1.29E-03
30GO:0048354: mucilage biosynthetic process involved in seed coat development1.29E-03
31GO:0048440: carpel development2.03E-03
32GO:0046688: response to copper ion2.19E-03
33GO:0009695: jasmonic acid biosynthetic process2.70E-03
34GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.82E-03
35GO:0031408: oxylipin biosynthetic process2.88E-03
36GO:0006470: protein dephosphorylation2.88E-03
37GO:0061077: chaperone-mediated protein folding2.88E-03
38GO:0006730: one-carbon metabolic process3.06E-03
39GO:0030433: ubiquitin-dependent ERAD pathway3.06E-03
40GO:0007005: mitochondrion organization3.06E-03
41GO:0009306: protein secretion3.43E-03
42GO:0061025: membrane fusion4.23E-03
43GO:0010193: response to ozone4.64E-03
44GO:0031047: gene silencing by RNA4.86E-03
45GO:0007264: small GTPase mediated signal transduction4.86E-03
46GO:0016192: vesicle-mediated transport5.05E-03
47GO:0045454: cell redox homeostasis5.75E-03
48GO:0001666: response to hypoxia5.98E-03
49GO:0009615: response to virus5.98E-03
50GO:0006906: vesicle fusion6.45E-03
51GO:0006974: cellular response to DNA damage stimulus6.45E-03
52GO:0015031: protein transport6.50E-03
53GO:0006888: ER to Golgi vesicle-mediated transport6.69E-03
54GO:0006397: mRNA processing7.39E-03
55GO:0048767: root hair elongation7.43E-03
56GO:0009407: toxin catabolic process7.69E-03
57GO:0006865: amino acid transport8.21E-03
58GO:0009853: photorespiration8.47E-03
59GO:0006099: tricarboxylic acid cycle8.74E-03
60GO:0030001: metal ion transport9.28E-03
61GO:0006887: exocytosis9.56E-03
62GO:0051707: response to other organism1.01E-02
63GO:0006486: protein glycosylation1.25E-02
64GO:0016569: covalent chromatin modification1.54E-02
65GO:0006413: translational initiation2.25E-02
66GO:0009617: response to bacterium2.68E-02
67GO:0048366: leaf development3.62E-02
68GO:0046777: protein autophosphorylation3.94E-02
69GO:0046686: response to cadmium ion3.97E-02
70GO:0006281: DNA repair4.95E-02
RankGO TermAdjusted P value
1GO:0042030: ATPase inhibitor activity0.00E+00
2GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity0.00E+00
3GO:0050220: prostaglandin-E synthase activity0.00E+00
4GO:0005090: Sar guanyl-nucleotide exchange factor activity4.31E-05
5GO:0004321: fatty-acyl-CoA synthase activity4.31E-05
6GO:0004450: isocitrate dehydrogenase (NADP+) activity1.07E-04
7GO:0004326: tetrahydrofolylpolyglutamate synthase activity1.07E-04
8GO:0015193: L-proline transmembrane transporter activity1.84E-04
9GO:0005093: Rab GDP-dissociation inhibitor activity1.84E-04
10GO:0016531: copper chaperone activity1.84E-04
11GO:0005096: GTPase activator activity5.22E-04
12GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity5.67E-04
13GO:0036402: proteasome-activating ATPase activity5.67E-04
14GO:1990714: hydroxyproline O-galactosyltransferase activity5.67E-04
15GO:0004144: diacylglycerol O-acyltransferase activity6.76E-04
16GO:0004656: procollagen-proline 4-dioxygenase activity6.76E-04
17GO:0051020: GTPase binding6.76E-04
18GO:0051920: peroxiredoxin activity6.76E-04
19GO:0102391: decanoate--CoA ligase activity6.76E-04
20GO:0004467: long-chain fatty acid-CoA ligase activity7.90E-04
21GO:0005484: SNAP receptor activity7.97E-04
22GO:0016209: antioxidant activity9.08E-04
23GO:0046914: transition metal ion binding1.03E-03
24GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity1.03E-03
25GO:0016207: 4-coumarate-CoA ligase activity1.16E-03
26GO:0044183: protein binding involved in protein folding1.57E-03
27GO:0008378: galactosyltransferase activity1.72E-03
28GO:0017025: TBP-class protein binding2.19E-03
29GO:0031418: L-ascorbic acid binding2.52E-03
30GO:0004298: threonine-type endopeptidase activity2.88E-03
31GO:0004540: ribonuclease activity2.88E-03
32GO:0004601: peroxidase activity3.88E-03
33GO:0008536: Ran GTPase binding4.02E-03
34GO:0004722: protein serine/threonine phosphatase activity6.30E-03
35GO:0004693: cyclin-dependent protein serine/threonine kinase activity7.69E-03
36GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors8.47E-03
37GO:0000149: SNARE binding9.01E-03
38GO:0004712: protein serine/threonine/tyrosine kinase activity9.01E-03
39GO:0004364: glutathione transferase activity9.83E-03
40GO:0051287: NAD binding1.16E-02
41GO:0015171: amino acid transmembrane transporter activity1.34E-02
42GO:0016874: ligase activity1.54E-02
43GO:0051082: unfolded protein binding1.60E-02
44GO:0015035: protein disulfide oxidoreductase activity1.64E-02
45GO:0004386: helicase activity1.70E-02
46GO:0005507: copper ion binding1.80E-02
47GO:0016758: transferase activity, transferring hexosyl groups1.84E-02
48GO:0004252: serine-type endopeptidase activity2.02E-02
49GO:0003743: translation initiation factor activity2.64E-02
50GO:0003824: catalytic activity2.81E-02
51GO:0000287: magnesium ion binding3.18E-02
52GO:0008233: peptidase activity3.71E-02
53GO:0004672: protein kinase activity3.75E-02
RankGO TermAdjusted P value
1GO:0000502: proteasome complex4.16E-08
2GO:0008541: proteasome regulatory particle, lid subcomplex4.36E-05
3GO:0005829: cytosol1.82E-04
4GO:0005838: proteasome regulatory particle1.84E-04
5GO:0009504: cell plate2.46E-04
6GO:0005774: vacuolar membrane2.82E-04
7GO:0005777: peroxisome3.64E-04
8GO:0031597: cytosolic proteasome complex6.76E-04
9GO:0031595: nuclear proteasome complex7.90E-04
10GO:0019773: proteasome core complex, alpha-subunit complex1.03E-03
11GO:0031901: early endosome membrane1.16E-03
12GO:0016604: nuclear body1.29E-03
13GO:0008540: proteasome regulatory particle, base subcomplex1.29E-03
14GO:0030176: integral component of endoplasmic reticulum membrane2.19E-03
15GO:0005758: mitochondrial intermembrane space2.52E-03
16GO:0045271: respiratory chain complex I2.70E-03
17GO:0005839: proteasome core complex2.88E-03
18GO:0000785: chromatin4.86E-03
19GO:0031201: SNARE complex9.56E-03
20GO:0005886: plasma membrane1.14E-02
21GO:0031966: mitochondrial membrane1.19E-02
22GO:0005681: spliceosomal complex1.40E-02
23GO:0005747: mitochondrial respiratory chain complex I1.44E-02
24GO:0010287: plastoglobule1.81E-02
25GO:0005623: cell1.91E-02
26GO:0048046: apoplast2.46E-02
27GO:0005874: microtubule3.67E-02
Gene type



Gene DE type