Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G23010

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032497: detection of lipopolysaccharide0.00E+00
2GO:0006105: succinate metabolic process0.00E+00
3GO:0019484: beta-alanine catabolic process0.00E+00
4GO:0006983: ER overload response0.00E+00
5GO:0033587: shikimate biosynthetic process0.00E+00
6GO:0006725: cellular aromatic compound metabolic process0.00E+00
7GO:0010398: xylogalacturonan metabolic process0.00E+00
8GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
9GO:0006182: cGMP biosynthetic process0.00E+00
10GO:0009448: gamma-aminobutyric acid metabolic process0.00E+00
11GO:0006592: ornithine biosynthetic process0.00E+00
12GO:0043269: regulation of ion transport0.00E+00
13GO:0006468: protein phosphorylation4.47E-05
14GO:0000162: tryptophan biosynthetic process9.67E-05
15GO:1900425: negative regulation of defense response to bacterium1.37E-04
16GO:0006014: D-ribose metabolic process1.37E-04
17GO:0010184: cytokinin transport3.04E-04
18GO:0009865: pollen tube adhesion3.04E-04
19GO:0006540: glutamate decarboxylation to succinate3.04E-04
20GO:0019478: D-amino acid catabolic process3.04E-04
21GO:0051775: response to redox state3.04E-04
22GO:0046167: glycerol-3-phosphate biosynthetic process3.04E-04
23GO:0035266: meristem growth3.04E-04
24GO:0009450: gamma-aminobutyric acid catabolic process3.04E-04
25GO:0007292: female gamete generation3.04E-04
26GO:0048544: recognition of pollen3.33E-04
27GO:0009808: lignin metabolic process3.80E-04
28GO:0008202: steroid metabolic process5.40E-04
29GO:0043069: negative regulation of programmed cell death6.31E-04
30GO:0043066: negative regulation of apoptotic process6.66E-04
31GO:0015865: purine nucleotide transport6.66E-04
32GO:0007584: response to nutrient6.66E-04
33GO:0030187: melatonin biosynthetic process6.66E-04
34GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine6.66E-04
35GO:0051788: response to misfolded protein6.66E-04
36GO:0052542: defense response by callose deposition6.66E-04
37GO:0019441: tryptophan catabolic process to kynurenine6.66E-04
38GO:0060919: auxin influx6.66E-04
39GO:0010033: response to organic substance6.66E-04
40GO:0006641: triglyceride metabolic process6.66E-04
41GO:0008219: cell death8.97E-04
42GO:0048767: root hair elongation9.53E-04
43GO:0046777: protein autophosphorylation1.02E-03
44GO:0006954: inflammatory response1.08E-03
45GO:0019563: glycerol catabolic process1.08E-03
46GO:0010359: regulation of anion channel activity1.08E-03
47GO:0051176: positive regulation of sulfur metabolic process1.08E-03
48GO:0060968: regulation of gene silencing1.08E-03
49GO:0045087: innate immune response1.20E-03
50GO:0035556: intracellular signal transduction1.49E-03
51GO:0010150: leaf senescence1.50E-03
52GO:0006072: glycerol-3-phosphate metabolic process1.55E-03
53GO:0009399: nitrogen fixation1.55E-03
54GO:0006882: cellular zinc ion homeostasis1.55E-03
55GO:0001676: long-chain fatty acid metabolic process1.55E-03
56GO:0019438: aromatic compound biosynthetic process1.55E-03
57GO:0006624: vacuolar protein processing1.55E-03
58GO:0048194: Golgi vesicle budding1.55E-03
59GO:0006020: inositol metabolic process1.55E-03
60GO:0070301: cellular response to hydrogen peroxide1.55E-03
61GO:0046902: regulation of mitochondrial membrane permeability1.55E-03
62GO:0051707: response to other organism1.66E-03
63GO:0031408: oxylipin biosynthetic process1.76E-03
64GO:0009636: response to toxic substance1.92E-03
65GO:0048364: root development1.94E-03
66GO:0006536: glutamate metabolic process2.07E-03
67GO:0010600: regulation of auxin biosynthetic process2.07E-03
68GO:0010188: response to microbial phytotoxin2.07E-03
69GO:0006878: cellular copper ion homeostasis2.07E-03
70GO:0006542: glutamine biosynthetic process2.07E-03
71GO:0010107: potassium ion import2.07E-03
72GO:1902584: positive regulation of response to water deprivation2.07E-03
73GO:0071215: cellular response to abscisic acid stimulus2.10E-03
74GO:0000290: deadenylation-dependent decapping of nuclear-transcribed mRNA2.65E-03
75GO:0007029: endoplasmic reticulum organization2.65E-03
76GO:0042631: cellular response to water deprivation2.67E-03
77GO:0010154: fruit development2.88E-03
78GO:0055114: oxidation-reduction process2.89E-03
79GO:0048367: shoot system development3.12E-03
80GO:0009626: plant-type hypersensitive response3.25E-03
81GO:0010337: regulation of salicylic acid metabolic process3.27E-03
82GO:0010315: auxin efflux3.27E-03
83GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly3.27E-03
84GO:0048827: phyllome development3.27E-03
85GO:0016070: RNA metabolic process3.27E-03
86GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation3.27E-03
87GO:0048232: male gamete generation3.27E-03
88GO:0043248: proteasome assembly3.27E-03
89GO:1902456: regulation of stomatal opening3.27E-03
90GO:0019252: starch biosynthetic process3.31E-03
91GO:0009851: auxin biosynthetic process3.31E-03
92GO:0006635: fatty acid beta-oxidation3.55E-03
93GO:0009630: gravitropism3.79E-03
94GO:0018105: peptidyl-serine phosphorylation3.93E-03
95GO:0006694: steroid biosynthetic process3.93E-03
96GO:0098655: cation transmembrane transport3.93E-03
97GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.93E-03
98GO:0046686: response to cadmium ion4.41E-03
99GO:0006614: SRP-dependent cotranslational protein targeting to membrane4.64E-03
100GO:0071669: plant-type cell wall organization or biogenesis4.64E-03
101GO:0006955: immune response4.64E-03
102GO:0046470: phosphatidylcholine metabolic process4.64E-03
103GO:0070370: cellular heat acclimation4.64E-03
104GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.39E-03
105GO:0006605: protein targeting5.39E-03
106GO:0010078: maintenance of root meristem identity5.39E-03
107GO:1900150: regulation of defense response to fungus5.39E-03
108GO:0016559: peroxisome fission5.39E-03
109GO:0006644: phospholipid metabolic process5.39E-03
110GO:0042742: defense response to bacterium5.40E-03
111GO:0006526: arginine biosynthetic process6.18E-03
112GO:0006098: pentose-phosphate shunt7.01E-03
113GO:0090333: regulation of stomatal closure7.01E-03
114GO:0007338: single fertilization7.01E-03
115GO:0009821: alkaloid biosynthetic process7.01E-03
116GO:0010311: lateral root formation7.03E-03
117GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway7.87E-03
118GO:0071577: zinc II ion transmembrane transport7.87E-03
119GO:0016051: carbohydrate biosynthetic process8.49E-03
120GO:0006535: cysteine biosynthetic process from serine8.77E-03
121GO:0006995: cellular response to nitrogen starvation8.77E-03
122GO:0048829: root cap development8.77E-03
123GO:0007064: mitotic sister chromatid cohesion8.77E-03
124GO:0051555: flavonol biosynthetic process8.77E-03
125GO:0006099: tricarboxylic acid cycle8.87E-03
126GO:0009617: response to bacterium9.54E-03
127GO:0043085: positive regulation of catalytic activity9.71E-03
128GO:0052544: defense response by callose deposition in cell wall9.71E-03
129GO:0030148: sphingolipid biosynthetic process9.71E-03
130GO:0010015: root morphogenesis9.71E-03
131GO:0000038: very long-chain fatty acid metabolic process9.71E-03
132GO:0042542: response to hydrogen peroxide1.05E-02
133GO:0071365: cellular response to auxin stimulus1.07E-02
134GO:0000266: mitochondrial fission1.07E-02
135GO:0018107: peptidyl-threonine phosphorylation1.17E-02
136GO:0055046: microgametogenesis1.17E-02
137GO:0006094: gluconeogenesis1.17E-02
138GO:0006541: glutamine metabolic process1.27E-02
139GO:0002237: response to molecule of bacterial origin1.27E-02
140GO:0009933: meristem structural organization1.27E-02
141GO:0010540: basipetal auxin transport1.27E-02
142GO:0034605: cellular response to heat1.27E-02
143GO:0010167: response to nitrate1.38E-02
144GO:0005985: sucrose metabolic process1.38E-02
145GO:0006812: cation transport1.38E-02
146GO:0090351: seedling development1.38E-02
147GO:0010053: root epidermal cell differentiation1.38E-02
148GO:0009225: nucleotide-sugar metabolic process1.38E-02
149GO:0007031: peroxisome organization1.38E-02
150GO:0009809: lignin biosynthetic process1.48E-02
151GO:0006813: potassium ion transport1.48E-02
152GO:0006863: purine nucleobase transport1.49E-02
153GO:0080147: root hair cell development1.60E-02
154GO:0007010: cytoskeleton organization1.60E-02
155GO:0019344: cysteine biosynthetic process1.60E-02
156GO:0009738: abscisic acid-activated signaling pathway1.66E-02
157GO:0006979: response to oxidative stress1.70E-02
158GO:0080167: response to karrikin1.75E-02
159GO:0009611: response to wounding1.81E-02
160GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.82E-02
161GO:0016998: cell wall macromolecule catabolic process1.84E-02
162GO:0016192: vesicle-mediated transport1.86E-02
163GO:0030433: ubiquitin-dependent ERAD pathway1.96E-02
164GO:0035428: hexose transmembrane transport1.96E-02
165GO:0071456: cellular response to hypoxia1.96E-02
166GO:0016226: iron-sulfur cluster assembly1.96E-02
167GO:0009733: response to auxin2.05E-02
168GO:0010227: floral organ abscission2.09E-02
169GO:0006012: galactose metabolic process2.09E-02
170GO:0009561: megagametogenesis2.22E-02
171GO:0000271: polysaccharide biosynthetic process2.48E-02
172GO:0010118: stomatal movement2.48E-02
173GO:0045489: pectin biosynthetic process2.62E-02
174GO:0046323: glucose import2.62E-02
175GO:0006885: regulation of pH2.62E-02
176GO:0016042: lipid catabolic process2.75E-02
177GO:0006952: defense response2.80E-02
178GO:0009845: seed germination2.86E-02
179GO:0010183: pollen tube guidance2.90E-02
180GO:0009749: response to glucose2.90E-02
181GO:0008654: phospholipid biosynthetic process2.90E-02
182GO:0002229: defense response to oomycetes3.04E-02
183GO:0010583: response to cyclopentenone3.19E-02
184GO:0009567: double fertilization forming a zygote and endosperm3.49E-02
185GO:0071805: potassium ion transmembrane transport3.64E-02
186GO:0051607: defense response to virus3.79E-02
187GO:0016126: sterol biosynthetic process3.95E-02
188GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.08E-02
189GO:0009607: response to biotic stimulus4.11E-02
190GO:0007166: cell surface receptor signaling pathway4.17E-02
191GO:0042128: nitrate assimilation4.27E-02
192GO:0009734: auxin-activated signaling pathway4.34E-02
193GO:0048573: photoperiodism, flowering4.44E-02
194GO:0006950: response to stress4.44E-02
195GO:0030244: cellulose biosynthetic process4.77E-02
196GO:0009832: plant-type cell wall biogenesis4.94E-02
197GO:0009813: flavonoid biosynthetic process4.94E-02
RankGO TermAdjusted P value
1GO:0019211: phosphatase activator activity0.00E+00
2GO:0016701: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen0.00E+00
3GO:0034387: 4-aminobutyrate:pyruvate transaminase activity0.00E+00
4GO:0004370: glycerol kinase activity0.00E+00
5GO:0030755: quercetin 3-O-methyltransferase activity0.00E+00
6GO:0008777: acetylornithine deacetylase activity0.00E+00
7GO:0015211: purine nucleoside transmembrane transporter activity0.00E+00
8GO:0051499: D-aminoacyl-tRNA deacylase activity0.00E+00
9GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
10GO:0033799: myricetin 3'-O-methyltransferase activity0.00E+00
11GO:0015370: solute:sodium symporter activity0.00E+00
12GO:0030744: luteolin O-methyltransferase activity0.00E+00
13GO:0047763: caffeate O-methyltransferase activity0.00E+00
14GO:0004674: protein serine/threonine kinase activity1.26E-07
15GO:0016301: kinase activity1.54E-07
16GO:0005524: ATP binding8.21E-07
17GO:0004383: guanylate cyclase activity1.50E-05
18GO:0004834: tryptophan synthase activity6.01E-05
19GO:0004012: phospholipid-translocating ATPase activity1.88E-04
20GO:0004747: ribokinase activity1.88E-04
21GO:0004112: cyclic-nucleotide phosphodiesterase activity3.04E-04
22GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity3.04E-04
23GO:0003867: 4-aminobutyrate transaminase activity3.04E-04
24GO:0017096: acetylserotonin O-methyltransferase activity3.04E-04
25GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.04E-04
26GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity3.04E-04
27GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity3.04E-04
28GO:0033984: indole-3-glycerol-phosphate lyase activity3.04E-04
29GO:0050200: plasmalogen synthase activity3.04E-04
30GO:0008865: fructokinase activity3.09E-04
31GO:0008142: oxysterol binding3.80E-04
32GO:0071949: FAD binding4.57E-04
33GO:0051213: dioxygenase activity6.42E-04
34GO:0045140: inositol phosphoceramide synthase activity6.66E-04
35GO:0004061: arylformamidase activity6.66E-04
36GO:0032934: sterol binding6.66E-04
37GO:0019200: carbohydrate kinase activity6.66E-04
38GO:0004142: diacylglycerol cholinephosphotransferase activity6.66E-04
39GO:0047209: coniferyl-alcohol glucosyltransferase activity6.66E-04
40GO:0004566: beta-glucuronidase activity6.66E-04
41GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity6.66E-04
42GO:0030246: carbohydrate binding6.84E-04
43GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism9.40E-04
44GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.08E-03
45GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity1.08E-03
46GO:0016595: glutamate binding1.08E-03
47GO:0004049: anthranilate synthase activity1.08E-03
48GO:0008430: selenium binding1.08E-03
49GO:0005047: signal recognition particle binding1.08E-03
50GO:0004108: citrate (Si)-synthase activity1.55E-03
51GO:0000339: RNA cap binding1.55E-03
52GO:0004300: enoyl-CoA hydratase activity1.55E-03
53GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.55E-03
54GO:0001653: peptide receptor activity1.55E-03
55GO:0010328: auxin influx transmembrane transporter activity2.07E-03
56GO:0050378: UDP-glucuronate 4-epimerase activity2.07E-03
57GO:0015204: urea transmembrane transporter activity2.07E-03
58GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.07E-03
59GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen2.65E-03
60GO:0008198: ferrous iron binding2.65E-03
61GO:0005471: ATP:ADP antiporter activity2.65E-03
62GO:0004356: glutamate-ammonia ligase activity2.65E-03
63GO:0045431: flavonol synthase activity2.65E-03
64GO:0045735: nutrient reservoir activity2.99E-03
65GO:0005516: calmodulin binding3.01E-03
66GO:0035252: UDP-xylosyltransferase activity3.27E-03
67GO:0036402: proteasome-activating ATPase activity3.27E-03
68GO:0004602: glutathione peroxidase activity3.93E-03
69GO:0004656: procollagen-proline 4-dioxygenase activity3.93E-03
70GO:0004124: cysteine synthase activity3.93E-03
71GO:0051753: mannan synthase activity3.93E-03
72GO:0004497: monooxygenase activity4.06E-03
73GO:0004620: phospholipase activity4.64E-03
74GO:0102425: myricetin 3-O-glucosyltransferase activity4.64E-03
75GO:0102360: daphnetin 3-O-glucosyltransferase activity4.64E-03
76GO:0004525: ribonuclease III activity5.39E-03
77GO:0047893: flavonol 3-O-glucosyltransferase activity5.39E-03
78GO:0004034: aldose 1-epimerase activity5.39E-03
79GO:0009931: calcium-dependent protein serine/threonine kinase activity5.72E-03
80GO:0030247: polysaccharide binding6.04E-03
81GO:0004683: calmodulin-dependent protein kinase activity6.04E-03
82GO:0005267: potassium channel activity6.18E-03
83GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity7.01E-03
84GO:0003924: GTPase activity7.34E-03
85GO:0047617: acyl-CoA hydrolase activity7.87E-03
86GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors8.49E-03
87GO:0004713: protein tyrosine kinase activity8.77E-03
88GO:0008171: O-methyltransferase activity8.77E-03
89GO:0008047: enzyme activator activity8.77E-03
90GO:0008794: arsenate reductase (glutaredoxin) activity9.71E-03
91GO:0008559: xenobiotic-transporting ATPase activity9.71E-03
92GO:0047372: acylglycerol lipase activity9.71E-03
93GO:0004364: glutathione transferase activity1.05E-02
94GO:0004672: protein kinase activity1.14E-02
95GO:0010329: auxin efflux transmembrane transporter activity1.17E-02
96GO:0004175: endopeptidase activity1.27E-02
97GO:0020037: heme binding1.31E-02
98GO:0017025: TBP-class protein binding1.38E-02
99GO:0031418: L-ascorbic acid binding1.60E-02
100GO:0005385: zinc ion transmembrane transporter activity1.60E-02
101GO:0005345: purine nucleobase transmembrane transporter activity1.72E-02
102GO:0015079: potassium ion transmembrane transporter activity1.72E-02
103GO:0008324: cation transmembrane transporter activity1.72E-02
104GO:0043424: protein histidine kinase binding1.72E-02
105GO:0035251: UDP-glucosyltransferase activity1.84E-02
106GO:0080043: quercetin 3-O-glucosyltransferase activity1.93E-02
107GO:0080044: quercetin 7-O-glucosyltransferase activity1.93E-02
108GO:0016760: cellulose synthase (UDP-forming) activity2.09E-02
109GO:0016746: transferase activity, transferring acyl groups2.18E-02
110GO:0015035: protein disulfide oxidoreductase activity2.18E-02
111GO:0005451: monovalent cation:proton antiporter activity2.48E-02
112GO:0046873: metal ion transmembrane transporter activity2.62E-02
113GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.72E-02
114GO:0015299: solute:proton antiporter activity2.76E-02
115GO:0050662: coenzyme binding2.76E-02
116GO:0010181: FMN binding2.76E-02
117GO:0016853: isomerase activity2.76E-02
118GO:0005355: glucose transmembrane transporter activity2.76E-02
119GO:0030170: pyridoxal phosphate binding2.94E-02
120GO:0005507: copper ion binding2.95E-02
121GO:0009055: electron carrier activity3.11E-02
122GO:0015144: carbohydrate transmembrane transporter activity3.17E-02
123GO:0004197: cysteine-type endopeptidase activity3.19E-02
124GO:0015385: sodium:proton antiporter activity3.33E-02
125GO:0016759: cellulose synthase activity3.49E-02
126GO:0005351: sugar:proton symporter activity3.57E-02
127GO:0005200: structural constituent of cytoskeleton3.64E-02
128GO:0008237: metallopeptidase activity3.64E-02
129GO:0005525: GTP binding3.64E-02
130GO:0008194: UDP-glycosyltransferase activity4.08E-02
131GO:0008375: acetylglucosaminyltransferase activity4.27E-02
132GO:0005509: calcium ion binding4.37E-02
133GO:0004806: triglyceride lipase activity4.44E-02
134GO:0008236: serine-type peptidase activity4.60E-02
135GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.60E-02
136GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.62E-02
137GO:0042802: identical protein binding4.62E-02
138GO:0005515: protein binding4.70E-02
139GO:0005506: iron ion binding4.79E-02
140GO:0015238: drug transmembrane transporter activity4.94E-02
RankGO TermAdjusted P value
1GO:0005785: signal recognition particle receptor complex0.00E+00
2GO:0005886: plasma membrane1.76E-11
3GO:0016021: integral component of membrane7.01E-11
4GO:0005783: endoplasmic reticulum6.59E-06
5GO:0005802: trans-Golgi network2.77E-04
6GO:0045252: oxoglutarate dehydrogenase complex3.04E-04
7GO:0005794: Golgi apparatus3.23E-04
8GO:0005789: endoplasmic reticulum membrane4.48E-04
9GO:0005950: anthranilate synthase complex6.66E-04
10GO:0000323: lytic vacuole1.55E-03
11GO:0005777: peroxisome1.76E-03
12GO:0016020: membrane2.14E-03
13GO:0031597: cytosolic proteasome complex3.93E-03
14GO:0030173: integral component of Golgi membrane3.93E-03
15GO:0005768: endosome4.39E-03
16GO:0031595: nuclear proteasome complex4.64E-03
17GO:0009506: plasmodesma5.53E-03
18GO:0005779: integral component of peroxisomal membrane6.18E-03
19GO:0005786: signal recognition particle, endoplasmic reticulum targeting6.18E-03
20GO:0008540: proteasome regulatory particle, base subcomplex7.87E-03
21GO:0005740: mitochondrial envelope8.77E-03
22GO:0005765: lysosomal membrane9.71E-03
23GO:0090404: pollen tube tip9.71E-03
24GO:0016602: CCAAT-binding factor complex1.17E-02
25GO:0010008: endosome membrane1.81E-02
26GO:0005774: vacuolar membrane2.40E-02
27GO:0005770: late endosome2.62E-02
28GO:0005618: cell wall3.15E-02
29GO:0032580: Golgi cisterna membrane3.49E-02
30GO:0005778: peroxisomal membrane3.64E-02
31GO:0000932: P-body3.95E-02
Gene type



Gene DE type