GO Enrichment Analysis of Co-expressed Genes with
AT4G22200
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0090470: shoot organ boundary specification | 0.00E+00 |
2 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
3 | GO:1905499: trichome papilla formation | 0.00E+00 |
4 | GO:0009773: photosynthetic electron transport in photosystem I | 6.84E-08 |
5 | GO:0009735: response to cytokinin | 1.25E-06 |
6 | GO:0042335: cuticle development | 1.64E-06 |
7 | GO:0090391: granum assembly | 3.82E-06 |
8 | GO:0016042: lipid catabolic process | 3.16E-05 |
9 | GO:0010196: nonphotochemical quenching | 7.70E-05 |
10 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.30E-04 |
11 | GO:0005991: trehalose metabolic process | 1.44E-04 |
12 | GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway | 1.44E-04 |
13 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.44E-04 |
14 | GO:0080051: cutin transport | 1.44E-04 |
15 | GO:0033481: galacturonate biosynthetic process | 1.44E-04 |
16 | GO:0015995: chlorophyll biosynthetic process | 1.97E-04 |
17 | GO:0015908: fatty acid transport | 3.29E-04 |
18 | GO:0043255: regulation of carbohydrate biosynthetic process | 3.29E-04 |
19 | GO:0010115: regulation of abscisic acid biosynthetic process | 3.29E-04 |
20 | GO:0001736: establishment of planar polarity | 3.29E-04 |
21 | GO:0010167: response to nitrate | 4.23E-04 |
22 | GO:0010025: wax biosynthetic process | 4.72E-04 |
23 | GO:0015714: phosphoenolpyruvate transport | 5.40E-04 |
24 | GO:0016998: cell wall macromolecule catabolic process | 6.31E-04 |
25 | GO:0010371: regulation of gibberellin biosynthetic process | 7.73E-04 |
26 | GO:1901332: negative regulation of lateral root development | 7.73E-04 |
27 | GO:0015979: photosynthesis | 9.73E-04 |
28 | GO:0010182: sugar mediated signaling pathway | 1.01E-03 |
29 | GO:0010222: stem vascular tissue pattern formation | 1.02E-03 |
30 | GO:0045727: positive regulation of translation | 1.02E-03 |
31 | GO:0015994: chlorophyll metabolic process | 1.02E-03 |
32 | GO:0015713: phosphoglycerate transport | 1.02E-03 |
33 | GO:0010021: amylopectin biosynthetic process | 1.02E-03 |
34 | GO:0006869: lipid transport | 1.20E-03 |
35 | GO:0006665: sphingolipid metabolic process | 1.29E-03 |
36 | GO:0080110: sporopollenin biosynthetic process | 1.29E-03 |
37 | GO:0006564: L-serine biosynthetic process | 1.29E-03 |
38 | GO:0010236: plastoquinone biosynthetic process | 1.29E-03 |
39 | GO:0010405: arabinogalactan protein metabolic process | 1.59E-03 |
40 | GO:0009913: epidermal cell differentiation | 1.59E-03 |
41 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.59E-03 |
42 | GO:0010337: regulation of salicylic acid metabolic process | 1.59E-03 |
43 | GO:0006561: proline biosynthetic process | 1.59E-03 |
44 | GO:0010027: thylakoid membrane organization | 1.78E-03 |
45 | GO:0010019: chloroplast-nucleus signaling pathway | 1.91E-03 |
46 | GO:0010189: vitamin E biosynthetic process | 1.91E-03 |
47 | GO:0009395: phospholipid catabolic process | 2.24E-03 |
48 | GO:0009772: photosynthetic electron transport in photosystem II | 2.24E-03 |
49 | GO:0050829: defense response to Gram-negative bacterium | 2.24E-03 |
50 | GO:0006400: tRNA modification | 2.24E-03 |
51 | GO:0010311: lateral root formation | 2.43E-03 |
52 | GO:0031540: regulation of anthocyanin biosynthetic process | 2.60E-03 |
53 | GO:0055075: potassium ion homeostasis | 2.60E-03 |
54 | GO:0048564: photosystem I assembly | 2.60E-03 |
55 | GO:0008610: lipid biosynthetic process | 2.60E-03 |
56 | GO:0070413: trehalose metabolism in response to stress | 2.60E-03 |
57 | GO:0032544: plastid translation | 2.96E-03 |
58 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 3.35E-03 |
59 | GO:0009658: chloroplast organization | 3.39E-03 |
60 | GO:0042761: very long-chain fatty acid biosynthetic process | 3.76E-03 |
61 | GO:0048829: root cap development | 4.18E-03 |
62 | GO:0006032: chitin catabolic process | 4.18E-03 |
63 | GO:0009688: abscisic acid biosynthetic process | 4.18E-03 |
64 | GO:0048765: root hair cell differentiation | 4.61E-03 |
65 | GO:0000038: very long-chain fatty acid metabolic process | 4.61E-03 |
66 | GO:0008285: negative regulation of cell proliferation | 4.61E-03 |
67 | GO:0009750: response to fructose | 4.61E-03 |
68 | GO:0009809: lignin biosynthetic process | 5.05E-03 |
69 | GO:0006820: anion transport | 5.06E-03 |
70 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.06E-03 |
71 | GO:0015706: nitrate transport | 5.06E-03 |
72 | GO:0010229: inflorescence development | 5.52E-03 |
73 | GO:0009718: anthocyanin-containing compound biosynthetic process | 5.52E-03 |
74 | GO:0010588: cotyledon vascular tissue pattern formation | 5.52E-03 |
75 | GO:0010628: positive regulation of gene expression | 5.52E-03 |
76 | GO:0048467: gynoecium development | 6.00E-03 |
77 | GO:0010143: cutin biosynthetic process | 6.00E-03 |
78 | GO:0010053: root epidermal cell differentiation | 6.50E-03 |
79 | GO:0009225: nucleotide-sugar metabolic process | 6.50E-03 |
80 | GO:0009825: multidimensional cell growth | 6.50E-03 |
81 | GO:0071732: cellular response to nitric oxide | 6.50E-03 |
82 | GO:0032259: methylation | 6.90E-03 |
83 | GO:0006833: water transport | 7.00E-03 |
84 | GO:0019762: glucosinolate catabolic process | 7.00E-03 |
85 | GO:0042023: DNA endoreduplication | 7.00E-03 |
86 | GO:0009624: response to nematode | 7.18E-03 |
87 | GO:0005992: trehalose biosynthetic process | 7.52E-03 |
88 | GO:0010073: meristem maintenance | 8.06E-03 |
89 | GO:0019953: sexual reproduction | 8.06E-03 |
90 | GO:0007017: microtubule-based process | 8.06E-03 |
91 | GO:0009695: jasmonic acid biosynthetic process | 8.06E-03 |
92 | GO:0009768: photosynthesis, light harvesting in photosystem I | 8.06E-03 |
93 | GO:0009269: response to desiccation | 8.61E-03 |
94 | GO:0031408: oxylipin biosynthetic process | 8.61E-03 |
95 | GO:0003333: amino acid transmembrane transport | 8.61E-03 |
96 | GO:0030245: cellulose catabolic process | 9.17E-03 |
97 | GO:0010227: floral organ abscission | 9.75E-03 |
98 | GO:0071369: cellular response to ethylene stimulus | 9.75E-03 |
99 | GO:0042744: hydrogen peroxide catabolic process | 1.02E-02 |
100 | GO:0010584: pollen exine formation | 1.03E-02 |
101 | GO:0010091: trichome branching | 1.03E-02 |
102 | GO:0034220: ion transmembrane transport | 1.16E-02 |
103 | GO:0009958: positive gravitropism | 1.22E-02 |
104 | GO:0010150: leaf senescence | 1.24E-02 |
105 | GO:0015986: ATP synthesis coupled proton transport | 1.28E-02 |
106 | GO:0019252: starch biosynthetic process | 1.35E-02 |
107 | GO:0000302: response to reactive oxygen species | 1.41E-02 |
108 | GO:0071281: cellular response to iron ion | 1.55E-02 |
109 | GO:0010252: auxin homeostasis | 1.62E-02 |
110 | GO:0006810: transport | 1.78E-02 |
111 | GO:0045893: positive regulation of transcription, DNA-templated | 1.80E-02 |
112 | GO:0016126: sterol biosynthetic process | 1.84E-02 |
113 | GO:0005975: carbohydrate metabolic process | 1.87E-02 |
114 | GO:0009627: systemic acquired resistance | 1.99E-02 |
115 | GO:0010411: xyloglucan metabolic process | 2.06E-02 |
116 | GO:0009651: response to salt stress | 2.09E-02 |
117 | GO:0030244: cellulose biosynthetic process | 2.22E-02 |
118 | GO:0018298: protein-chromophore linkage | 2.22E-02 |
119 | GO:0000160: phosphorelay signal transduction system | 2.30E-02 |
120 | GO:0009832: plant-type cell wall biogenesis | 2.30E-02 |
121 | GO:0009407: toxin catabolic process | 2.38E-02 |
122 | GO:0010218: response to far red light | 2.38E-02 |
123 | GO:0080167: response to karrikin | 2.39E-02 |
124 | GO:0009631: cold acclimation | 2.46E-02 |
125 | GO:0006865: amino acid transport | 2.54E-02 |
126 | GO:0009637: response to blue light | 2.63E-02 |
127 | GO:0034599: cellular response to oxidative stress | 2.71E-02 |
128 | GO:0010114: response to red light | 3.15E-02 |
129 | GO:0009926: auxin polar transport | 3.15E-02 |
130 | GO:0008283: cell proliferation | 3.15E-02 |
131 | GO:0009640: photomorphogenesis | 3.15E-02 |
132 | GO:0042546: cell wall biogenesis | 3.23E-02 |
133 | GO:0009636: response to toxic substance | 3.42E-02 |
134 | GO:0006855: drug transmembrane transport | 3.51E-02 |
135 | GO:0009408: response to heat | 3.53E-02 |
136 | GO:0071555: cell wall organization | 3.66E-02 |
137 | GO:0016310: phosphorylation | 3.78E-02 |
138 | GO:0006364: rRNA processing | 3.89E-02 |
139 | GO:0009736: cytokinin-activated signaling pathway | 3.89E-02 |
140 | GO:0006857: oligopeptide transport | 4.08E-02 |
141 | GO:0009734: auxin-activated signaling pathway | 4.94E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
2 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
3 | GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity | 0.00E+00 |
4 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
5 | GO:0016788: hydrolase activity, acting on ester bonds | 6.74E-06 |
6 | GO:0052689: carboxylic ester hydrolase activity | 1.56E-05 |
7 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.44E-04 |
8 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 1.44E-04 |
9 | GO:0015121: phosphoenolpyruvate:phosphate antiporter activity | 1.44E-04 |
10 | GO:0004321: fatty-acyl-CoA synthase activity | 1.44E-04 |
11 | GO:0015245: fatty acid transporter activity | 1.44E-04 |
12 | GO:0047746: chlorophyllase activity | 3.29E-04 |
13 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.29E-04 |
14 | GO:0033201: alpha-1,4-glucan synthase activity | 3.29E-04 |
15 | GO:0016630: protochlorophyllide reductase activity | 3.29E-04 |
16 | GO:0005528: FK506 binding | 5.23E-04 |
17 | GO:0004373: glycogen (starch) synthase activity | 5.40E-04 |
18 | GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity | 7.73E-04 |
19 | GO:0016851: magnesium chelatase activity | 7.73E-04 |
20 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 7.73E-04 |
21 | GO:0015120: phosphoglycerate transmembrane transporter activity | 1.02E-03 |
22 | GO:0004659: prenyltransferase activity | 1.02E-03 |
23 | GO:0010011: auxin binding | 1.02E-03 |
24 | GO:0010328: auxin influx transmembrane transporter activity | 1.02E-03 |
25 | GO:0016746: transferase activity, transferring acyl groups | 1.02E-03 |
26 | GO:0004506: squalene monooxygenase activity | 1.02E-03 |
27 | GO:0009011: starch synthase activity | 1.02E-03 |
28 | GO:0050378: UDP-glucuronate 4-epimerase activity | 1.02E-03 |
29 | GO:0050662: coenzyme binding | 1.09E-03 |
30 | GO:0008381: mechanically-gated ion channel activity | 1.29E-03 |
31 | GO:0009922: fatty acid elongase activity | 1.29E-03 |
32 | GO:0003959: NADPH dehydrogenase activity | 1.29E-03 |
33 | GO:0004518: nuclease activity | 1.32E-03 |
34 | GO:0016791: phosphatase activity | 1.50E-03 |
35 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.59E-03 |
36 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.59E-03 |
37 | GO:0004130: cytochrome-c peroxidase activity | 1.59E-03 |
38 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.59E-03 |
39 | GO:0016688: L-ascorbate peroxidase activity | 1.59E-03 |
40 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.91E-03 |
41 | GO:0052747: sinapyl alcohol dehydrogenase activity | 2.60E-03 |
42 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.64E-03 |
43 | GO:0008168: methyltransferase activity | 3.23E-03 |
44 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 3.35E-03 |
45 | GO:0016207: 4-coumarate-CoA ligase activity | 3.35E-03 |
46 | GO:0015112: nitrate transmembrane transporter activity | 3.76E-03 |
47 | GO:0030234: enzyme regulator activity | 4.18E-03 |
48 | GO:0004568: chitinase activity | 4.18E-03 |
49 | GO:0015293: symporter activity | 4.22E-03 |
50 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.37E-03 |
51 | GO:0004672: protein kinase activity | 5.02E-03 |
52 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 5.06E-03 |
53 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 5.21E-03 |
54 | GO:0030246: carbohydrate binding | 5.36E-03 |
55 | GO:0004565: beta-galactosidase activity | 5.52E-03 |
56 | GO:0004022: alcohol dehydrogenase (NAD) activity | 5.52E-03 |
57 | GO:0008266: poly(U) RNA binding | 6.00E-03 |
58 | GO:0031409: pigment binding | 7.00E-03 |
59 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 7.00E-03 |
60 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 7.00E-03 |
61 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 7.00E-03 |
62 | GO:0030570: pectate lyase activity | 9.75E-03 |
63 | GO:0008810: cellulase activity | 9.75E-03 |
64 | GO:0008289: lipid binding | 1.11E-02 |
65 | GO:0003824: catalytic activity | 1.15E-02 |
66 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.22E-02 |
67 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.41E-02 |
68 | GO:0016491: oxidoreductase activity | 1.51E-02 |
69 | GO:0000156: phosphorelay response regulator activity | 1.55E-02 |
70 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.69E-02 |
71 | GO:0005200: structural constituent of cytoskeleton | 1.69E-02 |
72 | GO:0016597: amino acid binding | 1.76E-02 |
73 | GO:0015250: water channel activity | 1.84E-02 |
74 | GO:0016168: chlorophyll binding | 1.91E-02 |
75 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.99E-02 |
76 | GO:0004683: calmodulin-dependent protein kinase activity | 2.06E-02 |
77 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.06E-02 |
78 | GO:0030247: polysaccharide binding | 2.06E-02 |
79 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.14E-02 |
80 | GO:0003993: acid phosphatase activity | 2.71E-02 |
81 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.88E-02 |
82 | GO:0004364: glutathione transferase activity | 3.06E-02 |
83 | GO:0051287: NAD binding | 3.60E-02 |
84 | GO:0009055: electron carrier activity | 3.78E-02 |
85 | GO:0004674: protein serine/threonine kinase activity | 3.96E-02 |
86 | GO:0016298: lipase activity | 3.98E-02 |
87 | GO:0003690: double-stranded DNA binding | 3.98E-02 |
88 | GO:0005215: transporter activity | 4.14E-02 |
89 | GO:0015171: amino acid transmembrane transporter activity | 4.18E-02 |
90 | GO:0045735: nutrient reservoir activity | 4.38E-02 |
91 | GO:0016874: ligase activity | 4.78E-02 |
92 | GO:0030599: pectinesterase activity | 4.78E-02 |
93 | GO:0022857: transmembrane transporter activity | 4.78E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
2 | GO:0009534: chloroplast thylakoid | 7.77E-11 |
3 | GO:0048046: apoplast | 2.39E-08 |
4 | GO:0009535: chloroplast thylakoid membrane | 1.24E-07 |
5 | GO:0009507: chloroplast | 7.90E-07 |
6 | GO:0009579: thylakoid | 3.18E-05 |
7 | GO:0005886: plasma membrane | 5.73E-05 |
8 | GO:0009941: chloroplast envelope | 1.36E-04 |
9 | GO:0009923: fatty acid elongase complex | 1.44E-04 |
10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.53E-04 |
11 | GO:0005618: cell wall | 3.05E-04 |
12 | GO:0046658: anchored component of plasma membrane | 4.53E-04 |
13 | GO:0010007: magnesium chelatase complex | 5.40E-04 |
14 | GO:0009897: external side of plasma membrane | 5.40E-04 |
15 | GO:0016021: integral component of membrane | 6.19E-04 |
16 | GO:0015630: microtubule cytoskeleton | 7.73E-04 |
17 | GO:0009505: plant-type cell wall | 9.96E-04 |
18 | GO:0010287: plastoglobule | 1.21E-03 |
19 | GO:0005576: extracellular region | 1.22E-03 |
20 | GO:0009543: chloroplast thylakoid lumen | 1.30E-03 |
21 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.59E-03 |
22 | GO:0009986: cell surface | 2.24E-03 |
23 | GO:0009501: amyloplast | 2.60E-03 |
24 | GO:0009570: chloroplast stroma | 3.34E-03 |
25 | GO:0005578: proteinaceous extracellular matrix | 5.52E-03 |
26 | GO:0030095: chloroplast photosystem II | 6.00E-03 |
27 | GO:0016020: membrane | 6.47E-03 |
28 | GO:0030076: light-harvesting complex | 6.50E-03 |
29 | GO:0009706: chloroplast inner membrane | 7.18E-03 |
30 | GO:0009654: photosystem II oxygen evolving complex | 8.06E-03 |
31 | GO:0009522: photosystem I | 1.28E-02 |
32 | GO:0019898: extrinsic component of membrane | 1.35E-02 |
33 | GO:0032580: Golgi cisterna membrane | 1.62E-02 |
34 | GO:0010319: stromule | 1.69E-02 |
35 | GO:0000151: ubiquitin ligase complex | 2.22E-02 |
36 | GO:0031969: chloroplast membrane | 2.39E-02 |
37 | GO:0031225: anchored component of membrane | 2.65E-02 |
38 | GO:0031977: thylakoid lumen | 2.97E-02 |
39 | GO:0005768: endosome | 3.21E-02 |