Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G20170

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009715: chalcone biosynthetic process0.00E+00
2GO:0010336: gibberellic acid homeostasis0.00E+00
3GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene0.00E+00
4GO:0090393: sepal giant cell development0.00E+00
5GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome0.00E+00
6GO:0015843: methylammonium transport0.00E+00
7GO:0009722: detection of cytokinin stimulus0.00E+00
8GO:0071345: cellular response to cytokine stimulus0.00E+00
9GO:0015822: ornithine transport0.00E+00
10GO:0042178: xenobiotic catabolic process0.00E+00
11GO:0009813: flavonoid biosynthetic process2.16E-07
12GO:0080167: response to karrikin3.24E-07
13GO:0051555: flavonol biosynthetic process3.11E-06
14GO:0010224: response to UV-B3.96E-05
15GO:0010076: maintenance of floral meristem identity4.28E-05
16GO:1901349: glucosinolate transport1.20E-04
17GO:1902265: abscisic acid homeostasis1.20E-04
18GO:0090449: phloem glucosinolate loading1.20E-04
19GO:0071370: cellular response to gibberellin stimulus1.20E-04
20GO:0006659: phosphatidylserine biosynthetic process1.20E-04
21GO:0019605: butyrate metabolic process1.20E-04
22GO:0006083: acetate metabolic process1.20E-04
23GO:0048438: floral whorl development1.20E-04
24GO:0000066: mitochondrial ornithine transport1.20E-04
25GO:0006805: xenobiotic metabolic process1.20E-04
26GO:0051171: regulation of nitrogen compound metabolic process1.20E-04
27GO:0016119: carotene metabolic process1.20E-04
28GO:0009698: phenylpropanoid metabolic process1.96E-04
29GO:0000272: polysaccharide catabolic process1.96E-04
30GO:0009629: response to gravity2.77E-04
31GO:0007154: cell communication2.77E-04
32GO:0010220: positive regulation of vernalization response2.77E-04
33GO:0043100: pyrimidine nucleobase salvage2.77E-04
34GO:1900386: positive regulation of flavonol biosynthetic process2.77E-04
35GO:0009926: auxin polar transport3.14E-04
36GO:0071555: cell wall organization3.79E-04
37GO:0030154: cell differentiation4.52E-04
38GO:0010253: UDP-rhamnose biosynthetic process4.58E-04
39GO:0046417: chorismate metabolic process4.58E-04
40GO:0044375: regulation of peroxisome size4.58E-04
41GO:0040009: regulation of growth rate4.58E-04
42GO:0006651: diacylglycerol biosynthetic process4.58E-04
43GO:0005977: glycogen metabolic process4.58E-04
44GO:0006011: UDP-glucose metabolic process4.58E-04
45GO:0031022: nuclear migration along microfilament4.58E-04
46GO:0006857: oligopeptide transport5.05E-04
47GO:0009411: response to UV5.89E-04
48GO:0009963: positive regulation of flavonoid biosynthetic process6.57E-04
49GO:0010255: glucose mediated signaling pathway6.57E-04
50GO:0015696: ammonium transport6.57E-04
51GO:0042823: pyridoxal phosphate biosynthetic process6.57E-04
52GO:0032877: positive regulation of DNA endoreduplication6.57E-04
53GO:0016117: carotenoid biosynthetic process6.91E-04
54GO:0006021: inositol biosynthetic process8.72E-04
55GO:0009902: chloroplast relocation8.72E-04
56GO:0034613: cellular protein localization8.72E-04
57GO:0009694: jasmonic acid metabolic process8.72E-04
58GO:0048442: sepal development8.72E-04
59GO:0009765: photosynthesis, light harvesting8.72E-04
60GO:0072488: ammonium transmembrane transport8.72E-04
61GO:0019408: dolichol biosynthetic process1.10E-03
62GO:0016120: carotene biosynthetic process1.10E-03
63GO:0010236: plastoquinone biosynthetic process1.10E-03
64GO:0006097: glyoxylate cycle1.10E-03
65GO:0016123: xanthophyll biosynthetic process1.10E-03
66GO:0009435: NAD biosynthetic process1.10E-03
67GO:0016094: polyprenol biosynthetic process1.10E-03
68GO:0008152: metabolic process1.13E-03
69GO:0010315: auxin efflux1.35E-03
70GO:0006559: L-phenylalanine catabolic process1.35E-03
71GO:0000060: protein import into nucleus, translocation1.35E-03
72GO:0009635: response to herbicide1.35E-03
73GO:0010942: positive regulation of cell death1.35E-03
74GO:0010304: PSII associated light-harvesting complex II catabolic process1.35E-03
75GO:0010264: myo-inositol hexakisphosphate biosynthetic process1.35E-03
76GO:0042128: nitrate assimilation1.55E-03
77GO:0017148: negative regulation of translation1.61E-03
78GO:0009903: chloroplast avoidance movement1.61E-03
79GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity1.61E-03
80GO:0010077: maintenance of inflorescence meristem identity1.61E-03
81GO:0098869: cellular oxidant detoxification1.89E-03
82GO:0009787: regulation of abscisic acid-activated signaling pathway2.19E-03
83GO:0031540: regulation of anthocyanin biosynthetic process2.19E-03
84GO:0052543: callose deposition in cell wall2.19E-03
85GO:0016559: peroxisome fission2.19E-03
86GO:0007155: cell adhesion2.19E-03
87GO:0009637: response to blue light2.28E-03
88GO:0009416: response to light stimulus2.32E-03
89GO:0022900: electron transport chain2.50E-03
90GO:0009056: catabolic process2.82E-03
91GO:0010380: regulation of chlorophyll biosynthetic process3.16E-03
92GO:0006810: transport3.21E-03
93GO:0048441: petal development3.51E-03
94GO:0010192: mucilage biosynthetic process3.51E-03
95GO:0000165: MAPK cascade3.53E-03
96GO:0009073: aromatic amino acid family biosynthetic process3.88E-03
97GO:0009809: lignin biosynthetic process3.93E-03
98GO:0015706: nitrate transport4.26E-03
99GO:0010582: floral meristem determinacy4.26E-03
100GO:0030048: actin filament-based movement4.64E-03
101GO:0048440: carpel development5.04E-03
102GO:0010223: secondary shoot formation5.04E-03
103GO:0009934: regulation of meristem structural organization5.04E-03
104GO:0010167: response to nitrate5.46E-03
105GO:0005985: sucrose metabolic process5.46E-03
106GO:0009225: nucleotide-sugar metabolic process5.46E-03
107GO:0007031: peroxisome organization5.46E-03
108GO:0009833: plant-type primary cell wall biogenesis5.88E-03
109GO:0006833: water transport5.88E-03
110GO:0010187: negative regulation of seed germination6.32E-03
111GO:0009695: jasmonic acid biosynthetic process6.76E-03
112GO:0009768: photosynthesis, light harvesting in photosystem I6.76E-03
113GO:0008299: isoprenoid biosynthetic process6.76E-03
114GO:0031408: oxylipin biosynthetic process7.22E-03
115GO:0009733: response to auxin8.08E-03
116GO:0048443: stamen development8.66E-03
117GO:0042127: regulation of cell proliferation8.66E-03
118GO:0010584: pollen exine formation8.66E-03
119GO:0006633: fatty acid biosynthetic process8.77E-03
120GO:0034220: ion transmembrane transport9.68E-03
121GO:0015991: ATP hydrolysis coupled proton transport9.68E-03
122GO:0045489: pectin biosynthetic process1.02E-02
123GO:0006520: cellular amino acid metabolic process1.02E-02
124GO:0015986: ATP synthesis coupled proton transport1.07E-02
125GO:0007059: chromosome segregation1.07E-02
126GO:0009791: post-embryonic development1.13E-02
127GO:0008654: phospholipid biosynthetic process1.13E-02
128GO:0009611: response to wounding1.13E-02
129GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.18E-02
130GO:0071554: cell wall organization or biogenesis1.18E-02
131GO:0010583: response to cyclopentenone1.24E-02
132GO:0019761: glucosinolate biosynthetic process1.24E-02
133GO:0007264: small GTPase mediated signal transduction1.24E-02
134GO:1901657: glycosyl compound metabolic process1.30E-02
135GO:0010252: auxin homeostasis1.36E-02
136GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.39E-02
137GO:0051607: defense response to virus1.47E-02
138GO:0009911: positive regulation of flower development1.54E-02
139GO:0010029: regulation of seed germination1.60E-02
140GO:0007049: cell cycle1.67E-02
141GO:0048573: photoperiodism, flowering1.72E-02
142GO:0030244: cellulose biosynthetic process1.85E-02
143GO:0018298: protein-chromophore linkage1.85E-02
144GO:0009832: plant-type cell wall biogenesis1.92E-02
145GO:0010311: lateral root formation1.92E-02
146GO:0010218: response to far red light1.99E-02
147GO:0010119: regulation of stomatal movement2.05E-02
148GO:0009910: negative regulation of flower development2.05E-02
149GO:0015979: photosynthesis2.12E-02
150GO:0009867: jasmonic acid mediated signaling pathway2.19E-02
151GO:0006839: mitochondrial transport2.41E-02
152GO:0009414: response to water deprivation2.59E-02
153GO:0010114: response to red light2.63E-02
154GO:0016042: lipid catabolic process2.67E-02
155GO:0042546: cell wall biogenesis2.70E-02
156GO:0009636: response to toxic substance2.85E-02
157GO:0006486: protein glycosylation3.25E-02
158GO:0051603: proteolysis involved in cellular protein catabolic process3.33E-02
159GO:0009909: regulation of flower development3.49E-02
160GO:0006096: glycolytic process3.66E-02
161GO:0009734: auxin-activated signaling pathway3.86E-02
162GO:0009740: gibberellic acid mediated signaling pathway4.00E-02
163GO:0042545: cell wall modification4.09E-02
164GO:0009624: response to nematode4.17E-02
165GO:0051726: regulation of cell cycle4.35E-02
166GO:0005975: carbohydrate metabolic process4.47E-02
167GO:0009738: abscisic acid-activated signaling pathway4.69E-02
RankGO TermAdjusted P value
1GO:0016210: naringenin-chalcone synthase activity0.00E+00
2GO:0047213: anthocyanidin 3-O-glucosyltransferase activity0.00E+00
3GO:0015205: nucleobase transmembrane transporter activity0.00E+00
4GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity0.00E+00
5GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity0.00E+00
6GO:0033961: cis-stilbene-oxide hydrolase activity0.00E+00
7GO:0050505: hydroquinone glucosyltransferase activity0.00E+00
8GO:0030795: jasmonate O-methyltransferase activity0.00E+00
9GO:0102078: methyl jasmonate methylesterase activity0.00E+00
10GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity0.00E+00
11GO:1990055: phenylacetaldehyde synthase activity0.00E+00
12GO:0016719: carotene 7,8-desaturase activity0.00E+00
13GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
14GO:0008734: L-aspartate oxidase activity0.00E+00
15GO:0045430: chalcone isomerase activity1.22E-05
16GO:0008194: UDP-glycosyltransferase activity2.07E-05
17GO:0016161: beta-amylase activity4.28E-05
18GO:0047760: butyrate-CoA ligase activity1.20E-04
19GO:0010313: phytochrome binding1.20E-04
20GO:0090448: glucosinolate:proton symporter activity1.20E-04
21GO:0004837: tyrosine decarboxylase activity1.20E-04
22GO:0045486: naringenin 3-dioxygenase activity1.20E-04
23GO:0003987: acetate-CoA ligase activity1.20E-04
24GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity2.77E-04
25GO:0000064: L-ornithine transmembrane transporter activity2.77E-04
26GO:0004106: chorismate mutase activity2.77E-04
27GO:0050377: UDP-glucose 4,6-dehydratase activity2.77E-04
28GO:0004512: inositol-3-phosphate synthase activity2.77E-04
29GO:0080106: 7-methylthiopropyl glucosinolate S-oxygenase activity2.77E-04
30GO:0048531: beta-1,3-galactosyltransferase activity2.77E-04
31GO:0010291: carotene beta-ring hydroxylase activity2.77E-04
32GO:0008460: dTDP-glucose 4,6-dehydratase activity2.77E-04
33GO:0010280: UDP-L-rhamnose synthase activity2.77E-04
34GO:0080102: 3-methylthiopropyl glucosinolate S-oxygenase activity2.77E-04
35GO:0050347: trans-octaprenyltranstransferase activity2.77E-04
36GO:0080104: 5-methylthiopropyl glucosinolate S-oxygenase activity2.77E-04
37GO:0016757: transferase activity, transferring glycosyl groups3.69E-04
38GO:0080103: 4-methylthiopropyl glucosinolate S-oxygenase activity4.58E-04
39GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity4.58E-04
40GO:0035251: UDP-glucosyltransferase activity4.95E-04
41GO:0080043: quercetin 3-O-glucosyltransferase activity6.44E-04
42GO:0080044: quercetin 7-O-glucosyltransferase activity6.44E-04
43GO:0048027: mRNA 5'-UTR binding6.57E-04
44GO:0080107: 8-methylthiopropyl glucosinolate S-oxygenase activity6.57E-04
45GO:0098599: palmitoyl hydrolase activity8.72E-04
46GO:0046527: glucosyltransferase activity8.72E-04
47GO:0004301: epoxide hydrolase activity8.72E-04
48GO:0080032: methyl jasmonate esterase activity8.72E-04
49GO:0016758: transferase activity, transferring hexosyl groups9.21E-04
50GO:0045547: dehydrodolichyl diphosphate synthase activity1.10E-03
51GO:0002094: polyprenyltransferase activity1.10E-03
52GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.12E-03
53GO:0016759: cellulose synthase activity1.17E-03
54GO:0000210: NAD+ diphosphatase activity1.35E-03
55GO:0016208: AMP binding1.35E-03
56GO:0102229: amylopectin maltohydrolase activity1.35E-03
57GO:0016688: L-ascorbate peroxidase activity1.35E-03
58GO:0008519: ammonium transmembrane transporter activity1.35E-03
59GO:0080030: methyl indole-3-acetate esterase activity1.35E-03
60GO:0008474: palmitoyl-(protein) hydrolase activity1.35E-03
61GO:0008429: phosphatidylethanolamine binding1.35E-03
62GO:0008195: phosphatidate phosphatase activity1.61E-03
63GO:0102425: myricetin 3-O-glucosyltransferase activity1.89E-03
64GO:0102360: daphnetin 3-O-glucosyltransferase activity1.89E-03
65GO:0016621: cinnamoyl-CoA reductase activity1.89E-03
66GO:0003824: catalytic activity1.93E-03
67GO:0005215: transporter activity1.95E-03
68GO:0047893: flavonol 3-O-glucosyltransferase activity2.19E-03
69GO:0016788: hydrolase activity, acting on ester bonds2.52E-03
70GO:0016207: 4-coumarate-CoA ligase activity2.82E-03
71GO:0009672: auxin:proton symporter activity3.16E-03
72GO:0030955: potassium ion binding3.16E-03
73GO:0015112: nitrate transmembrane transporter activity3.16E-03
74GO:0004743: pyruvate kinase activity3.16E-03
75GO:0004575: sucrose alpha-glucosidase activity3.16E-03
76GO:0052689: carboxylic ester hydrolase activity3.67E-03
77GO:0004860: protein kinase inhibitor activity3.88E-03
78GO:0046961: proton-transporting ATPase activity, rotational mechanism3.88E-03
79GO:0047372: acylglycerol lipase activity3.88E-03
80GO:0010329: auxin efflux transmembrane transporter activity4.64E-03
81GO:0042973: glucan endo-1,3-beta-D-glucosidase activity5.04E-03
82GO:0102337: 3-oxo-cerotoyl-CoA synthase activity5.88E-03
83GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity5.88E-03
84GO:0031409: pigment binding5.88E-03
85GO:0102336: 3-oxo-arachidoyl-CoA synthase activity5.88E-03
86GO:0031418: L-ascorbic acid binding6.32E-03
87GO:0051087: chaperone binding6.76E-03
88GO:0004176: ATP-dependent peptidase activity7.22E-03
89GO:0016760: cellulose synthase (UDP-forming) activity8.18E-03
90GO:0004499: N,N-dimethylaniline monooxygenase activity8.66E-03
91GO:0001085: RNA polymerase II transcription factor binding1.02E-02
92GO:0016853: isomerase activity1.07E-02
93GO:0019901: protein kinase binding1.13E-02
94GO:0004518: nuclease activity1.24E-02
95GO:0008237: metallopeptidase activity1.41E-02
96GO:0016413: O-acetyltransferase activity1.47E-02
97GO:0015250: water channel activity1.54E-02
98GO:0016168: chlorophyll binding1.60E-02
99GO:0030247: polysaccharide binding1.72E-02
100GO:0102483: scopolin beta-glucosidase activity1.72E-02
101GO:0004693: cyclin-dependent protein serine/threonine kinase activity1.99E-02
102GO:0004222: metalloendopeptidase activity1.99E-02
103GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding2.05E-02
104GO:0003993: acid phosphatase activity2.26E-02
105GO:0008422: beta-glucosidase activity2.33E-02
106GO:0050661: NADP binding2.41E-02
107GO:0004185: serine-type carboxypeptidase activity2.63E-02
108GO:0051537: 2 iron, 2 sulfur cluster binding2.78E-02
109GO:0015293: symporter activity2.85E-02
110GO:0045330: aspartyl esterase activity3.49E-02
111GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups3.74E-02
112GO:0016491: oxidoreductase activity3.76E-02
113GO:0004650: polygalacturonase activity3.91E-02
114GO:0016874: ligase activity4.00E-02
115GO:0030599: pectinesterase activity4.00E-02
116GO:0022857: transmembrane transporter activity4.00E-02
117GO:0016887: ATPase activity4.24E-02
118GO:0016746: transferase activity, transferring acyl groups4.26E-02
RankGO TermAdjusted P value
1GO:0097708: intracellular vesicle0.00E+00
2GO:0009507: chloroplast7.05E-05
3GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain2.77E-04
4GO:0009509: chromoplast4.58E-04
5GO:0042406: extrinsic component of endoplasmic reticulum membrane4.58E-04
6GO:0005775: vacuolar lumen6.57E-04
7GO:0009526: plastid envelope8.72E-04
8GO:0046658: anchored component of plasma membrane2.02E-03
9GO:0005779: integral component of peroxisomal membrane2.50E-03
10GO:0005765: lysosomal membrane3.88E-03
11GO:0019013: viral nucleocapsid4.64E-03
12GO:0005753: mitochondrial proton-transporting ATP synthase complex5.46E-03
13GO:0030076: light-harvesting complex5.46E-03
14GO:0043231: intracellular membrane-bounded organelle5.99E-03
15GO:0005783: endoplasmic reticulum6.15E-03
16GO:0009536: plastid9.23E-03
17GO:0009705: plant-type vacuole membrane9.64E-03
18GO:0009522: photosystem I1.07E-02
19GO:0009523: photosystem II1.13E-02
20GO:0071944: cell periphery1.30E-02
21GO:0005778: peroxisomal membrane1.41E-02
22GO:0005667: transcription factor complex1.66E-02
23GO:0005829: cytosol1.68E-02
24GO:0031969: chloroplast membrane1.86E-02
25GO:0031225: anchored component of membrane1.93E-02
26GO:0000325: plant-type vacuole2.05E-02
27GO:0005819: spindle2.33E-02
28GO:0031902: late endosome membrane2.48E-02
29GO:0005743: mitochondrial inner membrane2.55E-02
30GO:0016020: membrane2.61E-02
31GO:0005886: plasma membrane3.50E-02
32GO:0009505: plant-type cell wall3.54E-02
33GO:0005887: integral component of plasma membrane3.72E-02
34GO:0000139: Golgi membrane3.89E-02
35GO:0005794: Golgi apparatus4.36E-02
36GO:0010287: plastoglobule4.71E-02
37GO:0009543: chloroplast thylakoid lumen4.89E-02
38GO:0005623: cell4.99E-02
Gene type



Gene DE type